Restriction map for pFN21AA0720
 (Circular) (Six-base) MAPSORT of: pFN21AA0720.seq  Check: 7437  from: 1  to: 7891



pFN21AA0720  7891 bp

 With 182 enzymes: SgfI * 

                        January 16, 2009 15:23  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:   4797    4797 
   Size:       7891
 
AatII G_ACGT'C

Cuts at:    278     331     414     600    1536    5701     278 
   Size:         53      83     186     936    4165    2468

  Fragments arranged by size: 

                4165    2468     936     186      83      53
 
AccI GT'mk_AC

Cuts at:   1937    2973    5234    1937 
   Size:       1036    2261    4594

  Fragments arranged by size: 

                4594    2261    1036
 
Acc65I G'GTAC_C

Cuts at:   5212    5212 
   Size:       7891
 
AclI AA'CG_TT

Cuts at:   1563    6018    6391    1563 
   Size:       4455     373    3063

  Fragments arranged by size: 

                4455    3063     373
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:   1632    2905    3617    3878    4344    5954    7338    7606    1632 
   Size:       1273     712     261     466    1610    1384     268    1917

  Fragments arranged by size: 

                1917    1610    1384    1273     712     466     268     261
            
 
AfeI AGC'GCT

Cuts at:   3414    3731    3414 
   Size:        317    7574
 
AflII C'TTAA_G

Cuts at:    820    1017     820 
   Size:        197    7694
 
AflIII A'CryG_T

Cuts at:   1203    2235    2787    3750    4158    6790    7767    1203 
   Size:       1032     552     963     408    2632     977    1327

  Fragments arranged by size: 

                2632    1327    1032     977     963     552     408
 
AgeI A'CCGG_T

Cuts at:   6722    6722 
   Size:       7891
 
AhdI GACnn_n'nnGTC

Cuts at:   2665    4105    4480    6620    2665 
   Size:       1440     375    2140    3936

  Fragments arranged by size: 

                3936    2140    1440     375
 
AleI CACnn'nnGTG

Cuts at:   1166    1166 
   Size:       7891
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1184    1184 
   Size:       7891
 
AloI GAACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   3305    3337    3305 
   Size:         32    7859
 
AlwNI CAG_nnn'CTG

Cuts at:   2113    3595    3784    3928    4273    4282    4828    4838    5634 
   Size:       1482     189     144     345       9     546      10     796

Cuts at:   5634    7206    2113 
   Size:       1572    2798

  Fragments arranged by size: 

                2798    1572    1482     796     546     345     189     144
                  10       9
 
ApaI G_GGCC'C

Cuts at:   2130    2709    4702    4947    4969    2130 
   Size:        579    1993     245      22    5052

  Fragments arranged by size: 

                5052    1993     579     245      22
 
ApaLI G'TGCA_C

Cuts at:   4242    5948    7104    4242 
   Size:       1706    1156    5029

  Fragments arranged by size: 

                5029    1706    1156
 
ApoI r'AATT_y

Cuts at:   1493    2411    3863    5200    5426    5578    7687    1493 
   Size:        918    1452    1337     226     152    2109    1697

  Fragments arranged by size: 

                2109    1697    1452    1337     918     226     152
 
AseI AT'TA_AT

Cuts at:    160    1032    6445     160 
   Size:        872    5413    1606

  Fragments arranged by size: 

                5413    1606     872
 
AsiSI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       7891
 
AvaI C'yCGr_G

Cuts at:   1870    1943    2819    3039    3425    4490    4695    5056    5216 
   Size:         73     876     220     386    1065     205     361     160

Cuts at:   5216    1870 
   Size:       4545

  Fragments arranged by size: 

                4545    1065     876     386     361     220     205     160
                  73
 
BamHI G'GATC_C

Cuts at:   5221    5588    5221 
   Size:        367    7524
 
BanI G'GyrC_C

Cuts at:    618     943    1160    1787    3379    3899    4631    4841    5212 
   Size:        325     217     627    1592     520     732     210     371

Cuts at:   5212    6667     618 
   Size:       1455    1842

  Fragments arranged by size: 

                1842    1592    1455     732     627     520     371     325
                 217     210
 
BanII G_rGCy'C

Cuts at:   1391    2021    2130    2306    2709    2832    3141    4254    4702 
   Size:        630     109     176     403     123     309    1113     448

Cuts at:   4702    4887    4928    4947    4969    5088    5210    1391 
   Size:        185      41      19      22     119     122    4072

  Fragments arranged by size: 

                4072    1113     630     448     403     309     185     176
                 123     122     119     109      41      22      19
 
BbeI G_GCGC'C

Cuts at:   3383    3903    3383 
   Size:        520    7371
 
BbsI GAAGACnn'nnnn_

Cuts at:    928    1899    3093    3680     928 
   Size:        971    1194     587    5139

  Fragments arranged by size: 

                5139    1194     971     587
 
BbvCI CC'TCA_GC

Cuts at:   3668    3668 
   Size:       7891
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1903    1937    6082    6116    1903 
   Size:         34    4145      34    3678

  Fragments arranged by size: 

                4145    3678      34      34
 
BciVI GTATCCnnnnn_n'

Cuts at:   5783    6993    5783 
   Size:       1210    6681
 
BclI T'GATC_A

Cuts at:   1548    3243    1548 
   Size:       1695    6196
 
BfrBI ATG'CAT

Cuts at:   2176    2176 
   Size:       7891
 
BglI GCCn_nnn'nGGC

Cuts at:    136     243     365     436    1067    1672    3043    3698    6502 
   Size:        107     122      71     631     605    1371     655    2804

Cuts at:   6502     136 
   Size:       1525

  Fragments arranged by size: 

                2804    1525    1371     655     631     605     122     107
                  71
 
BglII A'GATC_T

Cuts at:   7886    7886 
   Size:       7891
 
BlpI GC'TnA_GC

Cuts at:   3602    5308    3602 
   Size:       1706    6185
 
Bme1580I G_kGCm'C

Cuts at:   1790    2130    2709    4246    4702    4947    4969    5952    7108 
   Size:        340     579    1537     456     245      22     983    1156

Cuts at:   7108    1790 
   Size:       2573

  Fragments arranged by size: 

                2573    1537    1156     983     579     456     340     245
                  22
 
BmgBI CAC'GTC

Cuts at:   1318    1318 
   Size:       7891
 
BmrI ACTGGGnnnn_n'

Cuts at:    442     858     911     994    1393    1417    2480    4513    5622 
   Size:        416      53      83     399      24    1063    2033    1109

Cuts at:   5622    6580     442 
   Size:        958    1753

  Fragments arranged by size: 

                2033    1753    1109    1063     958     416     399      83
                  53      24
 
BmtI G_CTAG'C

Cuts at:   1056    3372    1056 
   Size:       2316    5575
 
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   2320    2320 
   Size:       7891
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    2646    2738    2827    3011    3140    3410    3953    4805 
   Size:       1407      92      89     184     129     270     543     852

Cuts at:   4805    6551    1239 
   Size:       1746    2579

  Fragments arranged by size: 

                2579    1746    1407     852     543     270     184     129
                  92      89
 
Bpu10I CC'TnA_GC

Cuts at:   3668    5082    3668 
   Size:       1414    6477
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:   3641    4778    6016    6881    7179    3641 
   Size:       1137    1238     865     298    4353

  Fragments arranged by size: 

                4353    1238    1137     865     298
 
BsaI GGTCTCn'nnnn_

Cuts at:    882    1499    4436    4523    5040    5104    6554     882 
   Size:        617    2937      87     517      64    1450    2219

  Fragments arranged by size: 

                2937    2219    1450     617     517      87      64
 
BsaAI yAC'GTr

Cuts at:    493    1204    3564    3745    5682     493 
   Size:        711    2360     181    1937    2702

  Fragments arranged by size: 

                2702    2360    1937     711     181
 
BsaBI GATnn'nnATC

Cuts at:   7885    7885 
   Size:       7891
 
BsaHI Gr'CG_yC

Cuts at:    275     328     411     597    1533    2730    3380    3810    3900 
   Size:         53      83     186     936    1197     650     430      90

Cuts at:   3900    5698    6080    6715     275 
   Size:       1798     382     635    1451

  Fragments arranged by size: 

                1798    1451    1197     936     650     635     430     382
                 186      90      83      53
 
BsaWI w'CCGG_w

Cuts at:   2325    4591    6324    6722    6996    7143    7554    2325 
   Size:       2266    1733     398     274     147     411    2662

  Fragments arranged by size: 

                2662    2266    1733     411     398     274     147
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:   1178    1208    1373    1403    3047    3062    3077    3092    3179 
   Size:         30     165      30    1644      15      15      15      87

Cuts at:   3179    3209    3305    3335    4589    4619    1178 
   Size:         30      96      30    1254      30    4450

  Fragments arranged by size: 

                4450    1644    1254     165      96      87      30      30
                  30      30      30      15      15      15
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:   1186    2300    2303    2306    2309    2312    2383    3086    3089 
   Size:       1114       3       3       3       3      71     703       3

Cuts at:   3089    3509    3512    3695    3926    4304    4307    4322    4331 
   Size:        420       3     183     231     378       3      15       9

Cuts at:   4331    4334    4337    4340    4343    4346    4349    4808    1186 
   Size:          3       3       3       3       3       3     459    4269

  Fragments arranged by size: 

                4269    1114     703     459     420     378     231     183
                  71      15       9       3       3       3       3       3
                   3       3       3       3       3       3       3       3
            
 
BseYI C'CCAG_C

Cuts at:   2449    2515    2614    2696    2858    2945    4194    4865    4940 
   Size:         66      99      82     162      87    1249     671      75

Cuts at:   4940    4946    4950    5106    5130    7094    7590    2449 
   Size:          6       4     156      24    1964     496    2750

  Fragments arranged by size: 

                2750    1964    1249     671     496     162     156      99
                  87      82      75      66      24       6       4
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:   1163    1736    2099    2987    3191    3335    3854    1163 
   Size:        573     363     888     204     144     519    5200

  Fragments arranged by size: 

                5200     888     573     519     363     204     144
 
BsiEI CG_ry'CG

Cuts at:   1540    1815    2001    3792    4603    5341    6102    7130    1540 
   Size:        275     186    1791     811     738     761    1028    2301

  Fragments arranged by size: 

                2301    1791    1028     811     761     738     275     186
            
 
BsiHKAI G_wGCw'C

Cuts at:   2306    2336    3141    4246    4887    5952    6037    7108    2306 
   Size:         30     805    1105     641    1065      85    1071    3089

  Fragments arranged by size: 

                3089    1105    1071    1065     805     641      85      30
            
 
BsmI GAATG_Cn'

Cuts at:   2402    5402    5495    2402 
   Size:       3000      93    4798

  Fragments arranged by size: 

                4798    3000      93
 
BsmBI CGTCTCn'nnnn_

Cuts at:   3908    4748    3908 
   Size:        840    7051
 
Bsp1286I G_dGCh'C

Cuts at:   1391    1790    2021    2130    2306    2336    2709    2832    3141 
   Size:        399     231     109     176      30     373     123     309

Cuts at:   3141    4246    4254    4702    4887    4928    4947    4969    5088 
   Size:       1105       8     448     185      41      19      22     119

Cuts at:   5088    5210    5952    6037    7108    1391 
   Size:        122     742      85    1071    2174

  Fragments arranged by size: 

                2174    1105    1071     742     448     399     373     309
                 231     185     176     123     122     119     109      85
                  41      30      22      19       8
 
BspEI T'CCGG_A

Cuts at:   7554    7554 
   Size:       7891
 
BspHI T'CATG_A

Cuts at:   5780    7510    5780 
   Size:       1730    6161
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:    844    3285    4797    5026    5058    5246     844 
   Size:       2441    1512     229      32     188    3489

  Fragments arranged by size: 

                3489    2441    1512     229     188      32
 
BsrBI CCG'CTC

Cuts at:   1394    1823    3775    4605    5778    1394 
   Size:        429    1952     830    1173    3507

  Fragments arranged by size: 

                3507    1952    1173     830     429
 
BsrDI GCAATG_nn'

Cuts at:     65    1248    2508    6386    6560      65 
   Size:       1183    1260    3878     174    1396

  Fragments arranged by size: 

                3878    1396    1260    1183     174
 
BsrFI r'CCGG_y

Cuts at:   1700    1810    3382    6535    6722    1700 
   Size:        110    1572    3153     187    2869

  Fragments arranged by size: 

                3153    2869    1572     187     110
 
BsrGI T'GTAC_A

Cuts at:     96      96 
   Size:       7891
 
BssHII G'CGCG_C

Cuts at:   1925    3688    1925 
   Size:       1763    6128
 
BssSI C'ACGA_G

Cuts at:   4067    4713    5951    6963    4067 
   Size:        646    1238    1012    4995

  Fragments arranged by size: 

                4995    1238    1012     646
 
BstAPI GCAn_nnn'nTGC

Cuts at:    794    2397    3928    4237    4273     794 
   Size:       1603    1531     309      36    4412

  Fragments arranged by size: 

                4412    1603    1531     309      36
 
BstBI TT'CG_AA

Cuts at:   6695    6695 
   Size:       7891
 
BstEII G'GTnAC_C

Cuts at:   1184    4012    1184 
   Size:       2828    5063
 
BstXI CCAn_nnnn'nTGG

Cuts at:   4172    4459    4172 
   Size:        287    7604
 
BstYI r'GATC_y

Cuts at:   1972    4000    5221    5588    5973    5990    7442    7528    7540 
   Size:       2028    1221     367     385      17    1452      86      12

Cuts at:   7540    7886    1972 
   Size:        346    1977

  Fragments arranged by size: 

                2028    1977    1452    1221     385     367     346      86
                  17      12
 
Bsu36I CC'TnA_GG

Cuts at:   3113    3944    4932    3113 
   Size:        831     988    6072

  Fragments arranged by size: 

                6072     988     831
 
BtgI C'CryG_G

Cuts at:    513    1065    2004    3723    3792    4189    4437    4452    4614 
   Size:        552     939    1719      69     397     248      15     162

Cuts at:   4614    4846     513 
   Size:        232    3558

  Fragments arranged by size: 

                3558    1719     939     552     397     248     232     162
                  69      15
 
BtgZI GCGATGnnnnnnnnnn'nnnn_

Cuts at:    487    1170    1226     487 
   Size:        683      56    7152

  Fragments arranged by size: 

                7152     683      56
 
BtsI GCAGTG_nn'

Cuts at:   2280    2875    3179    4029    4545    5175    5407    6201    6221 
   Size:        595     304     850     516     630     232     794      20

Cuts at:   6221    2280 
   Size:       3950

  Fragments arranged by size: 

                3950     850     794     630     595     516     304     232
                  20
 
ClaI AT'CG_AT

Cuts at:   1554    1554 
   Size:       7891
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:    529     564     529 
   Size:         35    7856
 
DraI TTT'AAA

Cuts at:   5195    5195 
   Size:       7891
 
DraIII CAC_nnn'GTG

Cuts at:   3745    3745 
   Size:       7891
 
DrdI GACnn_nn'nnGTC

Cuts at:    809    1316    2043    6898     809 
   Size:        507     727    4855    1802

  Fragments arranged by size: 

                4855    1802     727     507
 
EaeI y'GGCC_r

Cuts at:      8      62    1487    1537    1812    1830    2079    2690    2770 
   Size:         54    1425      50     275      18     249     611      80

Cuts at:   2770    2910    2962    3615    3789    4174    4449    4600    5007 
   Size:        140      52     653     174     385     275     151     407

Cuts at:   5007    5338    6227    7856       8 
   Size:        331     889    1629      43

  Fragments arranged by size: 

                1629    1425     889     653     611     407     385     331
                 275     275     249     174     151     140      80      54
                  52      50      43      18
 
EagI C'GGCC_G

Cuts at:   1537    1812    3789    4600    5338    1537 
   Size:        275    1977     811     738    4090

  Fragments arranged by size: 

                4090    1977     811     738     275
 
EarI CTCTTCn'nnn_

Cuts at:   1353    2324    3023    3470    3551    3998    4281    4308    5030 
   Size:        971     699     447      81     447     283      27     722

Cuts at:   5030    5821    1353 
   Size:        791    3423

  Fragments arranged by size: 

                3423     971     791     722     699     447     447     283
                  81      27
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:    387    1451    1589    3326    3584    4736    6478    6852    6998 
   Size:       1064     138    1737     258    1152    1742     374     146

Cuts at:   6998     387 
   Size:       1280

  Fragments arranged by size: 

                1742    1737    1280    1152    1064     374     258     146
                 138
 
EcoICRI GAG'CTC

Cuts at:   2304    3139    4885    2304 
   Size:        835    1746    5310

  Fragments arranged by size: 

                5310    1746     835
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    1632    2646    2738    2827    2905    3011    3140    3410 
   Size:        393    1014      92      89      78     106     129     270

Cuts at:   3410    3617    3878    3953    4344    4805    5954    6551    7338 
   Size:        207     261      75     391     461    1149     597     787

Cuts at:   7338    7606    1239 
   Size:        268    1524

  Fragments arranged by size: 

                1524    1149    1014     787     597     461     393     391
                 270     268     261     207     129     106      92      89
                  78      75
 
EcoNI CCTnn'n_nnAGG

Cuts at:   2141    2804    3112    3226    4286    5068    2141 
   Size:        663     308     114    1060     782    4964

  Fragments arranged by size: 

                4964    1060     782     663     308     114
 
EcoO109I rG'GnC_Cy

Cuts at:   2126    2127    2706    4099    4107    4152    4699    4965    4966 
   Size:          1     579    1393       8      45     547     266       1

Cuts at:   4966    5061    2126 
   Size:         95    4956

  Fragments arranged by size: 

                4956    1393     579     547     266      95      45       8
                   1       1
 
EcoRI G'AATT_C

Cuts at:   5200    5578    5200 
   Size:        378    7513
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:   2416    2416 
   Size:       7891
 
FspI TGC'GCA

Cuts at:   6397    6397 
   Size:       7891
 
HaeII r_GCGC'y

Cuts at:   1678    2958    3319    3383    3416    3733    3890    3903    7038 
   Size:       1280     361      64      33     317     157      13    3135

Cuts at:   7038    1678 
   Size:       2531

  Fragments arranged by size: 

                3135    2531    1280     361     317     157      64      33
                  13
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:   1373    1405    1540    1572    2651    2683    3047    3079    4091 
   Size:         32     135      32    1079      32     364      32    1012

Cuts at:   4091    4123    4466    4498    4517    4549    4589    4621    5039 
   Size:         32     343      32      19      32      40      32     418

Cuts at:   5039    5071    6532    6564    6606    6638    1373 
   Size:         32    1461      32      42      32    2626

  Fragments arranged by size: 

                2626    1461    1079    1012     418     364     343     135
                  42      40      32      32      32      32      32      32
                  32      32      32      32      32      19
 
HincII GTy'rAC

Cuts at:    669    1657    1938    5235    5481     669 
   Size:        988     281    3297     246    3079

  Fragments arranged by size: 

                3297    3079     988     281     246
 
HindIII A'AGCT_T

Cuts at:    748     748 
   Size:       7891
 
HpaI GTT'AAC

Cuts at:   5481    5481 
   Size:       7891
 
KasI G'GCGC_C

Cuts at:   3379    3899    3379 
   Size:        520    7371
 
KpnI G_GTAC'C

Cuts at:   5216    5216 
   Size:       7891
 
MfeI C'AATT_G

Cuts at:   5490    5490 
   Size:       7891
 
MluI A'CGCG_T

Cuts at:   3750    7767    3750 
   Size:       4017    3874
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:   1305    2571    2772    7005    7189    1305 
   Size:       1266     201    4233     184    2007

  Fragments arranged by size: 

                4233    2007    1266     201     184
 
MscI TGG'CCA

Cuts at:     10      64    1489    1832    3617    4176    4451      10 
   Size:         54    1425     343    1785     559     275    3450

  Fragments arranged by size: 

                3450    1785    1425     559     343     275      54
 
MslI CAynn'nnrTG

Cuts at:    518    1166    2181    2379    4457    5849    6208    6367     518 
   Size:        648    1015     198    2078    1392     359     159    2042

  Fragments arranged by size: 

                2078    2042    1392    1015     648     359     198     159
            
 
MspA1I CmG'CkG

Cuts at:   1606    2024    2113    2696    2847    2862    2895    2925    2989 
   Size:        418      89     583     151      15      33      30      64

Cuts at:   2989    3129    3349    3631    3649    3766    3781    3925    4228 
   Size:        140     220     282      18     117      15     144     303

Cuts at:   4228    4237    4364    4398    4503    4768    4825    4950    4983 
   Size:          9     127      34     105     265      57     125      33

Cuts at:   4983    5307    5984    7132    7377    1606 
   Size:        324     677    1148     245    2120

  Fragments arranged by size: 

                2120    1148     677     583     418     324     303     282
                 265     245     220     151     144     140     127     125
                 117     105      89      64      57      34      33      33
                  30      18      15      15       9
 
NarI GG'CG_CC

Cuts at:   3380    3900    3380 
   Size:        520    7371
 
NcoI C'CATG_G

Cuts at:    513    1065    2004    4452    4614    4846     513 
   Size:        552     939    2448     162     232    3558

  Fragments arranged by size: 

                3558    2448     939     552     232     162
 
NdeI CA'TA_TG

Cuts at:    387     387 
   Size:       7891
 
NheI G'CTAG_C

Cuts at:   1052    3368    1052 
   Size:       2316    5575
 
NotI GC'GGCC_GC

Cuts at:   5338    5338 
   Size:       7891
 
NsiI A_TGCA'T

Cuts at:   2178    2178 
   Size:       7891
 
NspI r_CATG'y

Cuts at:   1132    1229    2192    2791    3520    3613    3760    5249    6794 
   Size:         97     963     599     729      93     147    1489    1545

Cuts at:   6794    1132 
   Size:       2229

  Fragments arranged by size: 

                2229    1545    1489     963     729     599     147      97
                  93
 
PasI CC'CwG_GG

Cuts at:   1348    4103    4585    5070    1348 
   Size:       2755     482     485    4169

  Fragments arranged by size: 

                4169    2755     485     482
 
PciI A'CATG_T

Cuts at:   2787    6790    2787 
   Size:       4003    3888
 
PflMI CCAn_nnn'nTGG

Cuts at:   1108    4828    1108 
   Size:       3720    4171
 
PfoI T'CCnGG_A

Cuts at:   3333    3333 
   Size:       7891
 
PmeI GTTT'AAAC

Cuts at:   5195    5195 
   Size:       7891
 
PmlI CAC'GTG

Cuts at:   3564    3745    3564 
   Size:        181    7710
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   3305    3337    5960    5992    7473    7505    3305 
   Size:         32    2623      32    1481      32    3691

  Fragments arranged by size: 

                3691    2623    1481      32      32      32
 
PpuMI rG'GwC_Cy

Cuts at:   4099    4107    4099 
   Size:          8    7883
 
PshAI GACnn'nnGTC

Cuts at:   1613    4046    4503    1613 
   Size:       2433     457    5001

  Fragments arranged by size: 

                5001    2433     457
 
PsiI TTA'TAA

Cuts at:   5461    5461 
   Size:       7891
 
PspOMI G'GGCC_C

Cuts at:   2126    2705    4698    4943    4965    2126 
   Size:        579    1993     245      22    5052

  Fragments arranged by size: 

                5052    1993     579     245      22
 
PstI C_TGCA'G

Cuts at:    830    4278    5023    5243     830 
   Size:       3448     745     220    3478

  Fragments arranged by size: 

                3478    3448     745     220
 
PvuI CG_AT'CG

Cuts at:   2001    2001 
   Size:       7891
 
PvuII CAG'CTG

Cuts at:   2113    2696    2847    2895    2989    3129    3349    3925    4228 
   Size:        583     151      48      94     140     220     576     303

Cuts at:   4228    4237    4364    4768    4825    4950    2113 
   Size:          9     127     404      57     125    5054

  Fragments arranged by size: 

                5054     583     576     404     303     220     151     140
                 127     125      94      57      48       9
 
SacI G_AGCT'C

Cuts at:   2306    3141    4887    2306 
   Size:        835    1746    5310

  Fragments arranged by size: 

                5310    1746     835
 
SalI G'TCGA_C

Cuts at:   1936    5233    1936 
   Size:       3297    4594
 
SanDI GG'GwC_CC

Cuts at:   4099    4099 
   Size:       7891
 
SapI GCTCTTCn'nnn_

Cuts at:   2324    3470    2324 
   Size:       1146    6745
 
SbfI CC_TGCA'GG

Cuts at:   5023    5243    5023 
   Size:        220    7671
 
ScaI AGT'ACT

Cuts at:   6139    7851    6139 
   Size:       1712    6179
 
SfcI C'TryA_G

Cuts at:    826    1045    2578    3010    3419    4146    4274    5019    5239 
   Size:        219    1533     432     409     727     128     745     220

Cuts at:   5239    6374    7055    7246     826 
   Size:       1135     681     191    1471

  Fragments arranged by size: 

                1533    1471    1135     745     727     681     432     409
                 220     219     191     128
 
SfoI GGC'GCC

Cuts at:   3381    3901    3381 
   Size:        520    7371
 
SgfI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       7891
 
SgrAI Cr'CCGG_yG

Cuts at:   1700    3382    1700 
   Size:       1682    6209
 
SmaI CCC'GGG

Cuts at:   1872    2821    3041    3427    5218    1872 
   Size:        949     220     386    1791    4545

  Fragments arranged by size: 

                4545    1791     949     386     220
 
SmlI C'TyrA_G

Cuts at:    820    1017    1943    3656    4793    5995    6896    7158     820 
   Size:        197     926    1713    1137    1202     901     262    1553

  Fragments arranged by size: 

                1713    1553    1202    1137     926     901     262     197
            
 
SnaBI TAC'GTA

Cuts at:    493    5682     493 
   Size:       5189    2702
 
SpeI A'CTAG_T

Cuts at:    152     152 
   Size:       7891
 
SphI G_CATG'C

Cuts at:   1132    3760    5249    1132 
   Size:       2628    1489    3774

  Fragments arranged by size: 

                3774    2628    1489
 
SspI AAT'ATT

Cuts at:      5      52    5815       5 
   Size:         47    5763    2081

  Fragments arranged by size: 

                5763    2081      47
 
StuI AGG'CCT

Cuts at:   1517    2147    2340    2576    3218    4181    1517 
   Size:        630     193     236     642     963    5227

  Fragments arranged by size: 

                5227     963     642     630     236     193
 
StyI C'CwwG_G

Cuts at:    513    1065    2004    2082    3693    4452    4614    4846    5330 
   Size:        552     939      78    1611     759     162     232     484

Cuts at:   5330     513 
   Size:       3074

  Fragments arranged by size: 

                3074    1611     939     759     552     484     232     162
                  78
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:    325    1580    3594    3692    4186    4859    5918    5935    6088 
   Size:       1255    2014      98     494     673    1059      17     153

Cuts at:   6088    6273    6718     325 
   Size:        185     445    1498

  Fragments arranged by size: 

                2014    1498    1255    1059     673     494     445     185
                 153      98      17
 
TatI w'GTAC_w

Cuts at:     96     370     450     483     534    1977    3513    3981    6137 
   Size:        274      80      33      51    1443    1536     468    2156

Cuts at:   6137    7849      96 
   Size:       1712     138

  Fragments arranged by size: 

                2156    1712    1536    1443     468     274     138      80
                  51      33
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   3179    3211    5026    5058    7851    7883    3179 
   Size:         32    1815      32    2793      32    3187

  Fragments arranged by size: 

                3187    2793    1815      32      32      32
 
Tth111I GACn'n_nGTC

Cuts at:   1316    1316 
   Size:       7891
 
XbaI T'CTAG_A

Cuts at:   5227    5227 
   Size:       7891
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:   2272    4444    2272 
   Size:       2172    5719
 
XhoI C'TCGA_G

Cuts at:   1943    1943 
   Size:       7891
 
XmaI C'CCGG_G

Cuts at:   1870    2819    3039    3425    5216    1870 
   Size:        949     220     386    1791    4545

  Fragments arranged by size: 

                4545    1791     949     386     220
 
XmnI GAAnn'nnTTC

Cuts at:   6020    6020 
   Size:       7891
 
ZraI GAC'GTC

Cuts at:    276     329     412     598    1534    5699     276 
   Size:         53      83     186     936    4165    2468

  Fragments arranged by size: 

                4165    2468     936     186      83      53
 

 Enzymes that do cut:

     AarI    AatII     AccI   Acc65I     AclI     AcuI     AfeI    AflII
   AflIII     AgeI     AhdI     AleI     AlfI     AloI    AlwNI     ApaI
    ApaLI     ApoI     AseI    AsiSI     AvaI    BamHI     BanI    BanII
     BbeI     BbsI    BbvCI     BcgI    BciVI     BclI    BfrBI     BglI
    BglII     BlpI Bme1580I    BmgBI     BmrI     BmtI     BplI     BpmI
   Bpu10I    BpuEI     BsaI    BsaAI    BsaBI    BsaHI    BsaWI    BsaXI
    BseRI    BseYI     BsgI    BsiEI  BsiHKAI     BsmI    BsmBI Bsp1286I
    BspEI    BspHI    BspMI    BsrBI    BsrDI    BsrFI    BsrGI   BssHII
    BssSI   BstAPI    BstBI   BstEII    BstXI    BstYI   Bsu36I     BtgI
    BtgZI     BtsI     ClaI    CspCI     DraI   DraIII     DrdI     EaeI
     EagI     EarI     EciI  EcoICRI  Eco57MI    EcoNI EcoO109I    EcoRI
     FalI     FspI    HaeII    Hin4I   HincII  HindIII     HpaI     KasI
     KpnI     MfeI     MluI     MmeI     MscI     MslI   MspA1I     NarI
     NcoI     NdeI     NheI     NotI     NsiI     NspI     PasI     PciI
    PflMI     PfoI     PmeI     PmlI     PpiI    PpuMI    PshAI     PsiI
   PspOMI     PstI     PvuI    PvuII     SacI     SalI    SanDI     SapI
     SbfI     ScaI     SfcI     SfoI     SgfI    SgrAI     SmaI     SmlI
    SnaBI     SpeI     SphI     SspI     StuI     StyI    TaqII     TatI
     TstI  Tth111I     XbaI     XcmI     XhoI     XmaI     XmnI     ZraI

 Enzymes that do not cut: 

     AscI    AvrII     BaeI    BsiWI  BstZ17I    EcoRV     FseI    FspAI
     NaeI   NgoMIV     NruI     PacI    PspXI     PsrI    RsrII    SacII
    SexAI     SfiI     SrfI     SwaI
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