Restriction map for pFN21AA0333
 (Circular) (Six-base) MAPSORT of: pFN21AA0333.seq  Check: 9241  from: 1  to: 8272



pFN21AA0333  8272 bp

 With 182 enzymes: SgfI * 

                        January 16, 2009 15:22  ..

AarI CACCTGCnnnn'nnnn_

Cuts at:   3865    3865 
   Size:       8272
 
AatII G_ACGT'C

Cuts at:    278     331     414     600    1536    4500    6082     278 
   Size:         53      83     186     936    2964    1582    2468

  Fragments arranged by size: 

                2964    2468    1582     936     186      83      53
 
AccI GT'mk_AC

Cuts at:   1937    5615    1937 
   Size:       3678    4594
 
Acc65I G'GTAC_C

Cuts at:   3931    5593    3931 
   Size:       1662    6610
 
AclI AA'CG_TT

Cuts at:   1563    6399    6772    1563 
   Size:       4836     373    3063

  Fragments arranged by size: 

                4836    3063     373
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:   1632    2480    3813    4220    4295    4486    4749    5094    6335 
   Size:        848    1333     407      75     191     263     345    1241

Cuts at:   6335    7719    7987    1632 
   Size:       1384     268    1917

  Fragments arranged by size: 

                1917    1384    1333    1241     848     407     345     268
                 263     191      75
 
AfeI AGC'GCT

Cuts at:   2356    2356 
   Size:       8272
 
AflII C'TTAA_G

Cuts at:    820    1017     820 
   Size:        197    8075
 
AflIII A'CryG_T

Cuts at:   1203    7171    8148    1203 
   Size:       5968     977    1327

  Fragments arranged by size: 

                5968    1327     977
 
AgeI A'CCGG_T

Cuts at:   7103    7103 
   Size:       8272
 
AhdI GACnn_n'nnGTC

Cuts at:   3610    7001    3610 
   Size:       3391    4881
 
AleI CACnn'nnGTG

Cuts at:   1166    2396    4937    5283    1166 
   Size:       1230    2541     346    4155

  Fragments arranged by size: 

                4155    2541    1230     346
 
AlfI GCAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1184    2984    1184 
   Size:       1800    6472
 
AlwNI CAG_nnn'CTG

Cuts at:   2173    2236    4634    6015    7587    2173 
   Size:         63    2398    1381    1572    2858

  Fragments arranged by size: 

                2858    2398    1572    1381      63
 
ApaLI G'TGCA_C

Cuts at:   3401    6329    7485    3401 
   Size:       2928    1156    4188

  Fragments arranged by size: 

                4188    2928    1156
 
ApoI r'AATT_y

Cuts at:   1493    4003    4011    4566    5207    5581    5807    5959    8068 
   Size:       2510       8     555     641     374     226     152    2109

Cuts at:   8068    1493 
   Size:       1697

  Fragments arranged by size: 

                2510    2109    1697     641     555     374     226     152
                   8
 
AseI AT'TA_AT

Cuts at:    160    1032    6826     160 
   Size:        872    5794    1606

  Fragments arranged by size: 

                5794    1606     872
 
AsiSI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       8272
 
AvaI C'yCGr_G

Cuts at:   1870    1943    2023    2660    2910    3203    3479    4817    5597 
   Size:         73      80     637     250     293     276    1338     780

Cuts at:   5597    1870 
   Size:       4545

  Fragments arranged by size: 

                4545    1338     780     637     293     276     250      80
                  73
 
BamHI G'GATC_C

Cuts at:   2553    5602    5969    2553 
   Size:       3049     367    4856

  Fragments arranged by size: 

                4856    3049     367
 
BanI G'GyrC_C

Cuts at:    618     943    1160    1787    2038    2250    3044    3175    3182 
   Size:        325     217     627     251     212     794     131       7

Cuts at:   3182    3779    3853    3931    5026    5593    7048     618 
   Size:        597      74      78    1095     567    1455    1842

  Fragments arranged by size: 

                1842    1455    1095     794     627     597     567     325
                 251     217     212     131      78      74       7
 
BanII G_rGCy'C

Cuts at:   1391    2301    2532    2612    2661    4824    5355    5591    1391 
   Size:        910     231      80      49    2163     531     236    4072

  Fragments arranged by size: 

                4072    2163     910     531     236     231      80      49
            
 
BbeI G_GCGC'C

Cuts at:   2254    3179    2254 
   Size:        925    7347
 
BbsI GAAGACnn'nnnn_

Cuts at:    928    1899    2946    3096    3350    3609    3708    4382    4492 
   Size:        971    1047     150     254     259      99     674     110

Cuts at:   4492    4653    4842    5309    5328     928 
   Size:        161     189     467      19    3872

  Fragments arranged by size: 

                3872    1047     971     674     467     259     254     189
                 161     150     110      99      19
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:   1903    1937    6463    6497    1903 
   Size:         34    4526      34    3678

  Fragments arranged by size: 

                4526    3678      34      34
 
BciVI GTATCCnnnnn_n'

Cuts at:   3266    5235    6164    7374    3266 
   Size:       1969     929    1210    4164

  Fragments arranged by size: 

                4164    1969    1210     929
 
BclI T'GATC_A

Cuts at:   1548    1548 
   Size:       8272
 
BglI GCCn_nnn'nGGC

Cuts at:    136     243     365     436    1067    1672    3842    3851    6883 
   Size:        107     122      71     631     605    2170       9    3032

Cuts at:   6883     136 
   Size:       1525

  Fragments arranged by size: 

                3032    2170    1525     631     605     122     107      71
                   9
 
BglII A'GATC_T

Cuts at:   3153    4331    8267    3153 
   Size:       1178    3936    3158

  Fragments arranged by size: 

                3936    3158    1178
 
BlpI GC'TnA_GC

Cuts at:   5046    5495    5689    5046 
   Size:        449     194    7629

  Fragments arranged by size: 

                7629     449     194
 
Bme1580I G_kGCm'C

Cuts at:   1790    3405    3782    5031    6333    7489    1790 
   Size:       1615     377    1249    1302    1156    2573

  Fragments arranged by size: 

                2573    1615    1302    1249    1156     377
 
BmgBI CAC'GTC

Cuts at:   1318    2304    5470    1318 
   Size:        986    3166    4120

  Fragments arranged by size: 

                4120    3166     986
 
BmrI ACTGGGnnnn_n'

Cuts at:    442     858     911     994    1393    1417    2374    2640    3348 
   Size:        416      53      83     399      24     957     266     708

Cuts at:   3348    6003    6961     442 
   Size:       2655     958    1753

  Fragments arranged by size: 

                2655    1753     958     957     708     416     399     266
                  83      53      24
 
BmtI G_CTAG'C

Cuts at:   1056    1056 
   Size:       8272
 
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   2350    3432    4267    2350 
   Size:       1082     835    6355

  Fragments arranged by size: 

                6355    1082     835
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    2168    2303    2778    3051    3402    3645    4430    4785 
   Size:        929     135     475     273     351     243     785     355

Cuts at:   4785    5112    6932    1239 
   Size:        327    1820    2579

  Fragments arranged by size: 

                2579    1820     929     785     475     355     351     327
                 273     243     135
 
Bpu10I CC'TnA_GC

Cuts at:   2733    3295    3375    2733 
   Size:        562      80    7630

  Fragments arranged by size: 

                7630     562      80
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:   3134    5315    6397    7262    7560    3134 
   Size:       2181    1082     865     298    3846

  Fragments arranged by size: 

                3846    2181    1082     865     298
 
BsaI GGTCTCn'nnnn_

Cuts at:    882    1499    2357    3019    3403    3425    6935     882 
   Size:        617     858     662     384      22    3510    2219

  Fragments arranged by size: 

                3510    2219     858     662     617     384      22
 
BsaAI yAC'GTr

Cuts at:    493    1204    3217    4311    4460    6063     493 
   Size:        711    2013    1094     149    1603    2702

  Fragments arranged by size: 

                2702    2013    1603    1094     711     149
 
BsaBI GATnn'nnATC

Cuts at:   4812    8266    4812 
   Size:       3454    4818
 
BsaHI Gr'CG_yC

Cuts at:    275     328     411     597    1533    2251    2322    2637    3176 
   Size:         53      83     186     936     718      71     315     539

Cuts at:   3176    3967    4497    6079    6461    7096     275 
   Size:        791     530    1582     382     635    1451

  Fragments arranged by size: 

                1582    1451     936     791     718     635     539     530
                 382     315     186      83      71      53
 
BsaWI w'CCGG_w

Cuts at:   4690    6705    7103    7377    7524    7935    4690 
   Size:       2015     398     274     147     411    5027

  Fragments arranged by size: 

                5027    2015     411     398     274     147
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:   1178    1208    1373    1403    3550    3580    3643    3673    1178 
   Size:         30     165      30    2147      30      63      30    5777

  Fragments arranged by size: 

                5777    2147     165      63      30      30      30      30
            
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:   1186    2048    2278    2600    2765    3632    5405    1186 
   Size:        862     230     322     165     867    1773    4053

  Fragments arranged by size: 

                4053    1773     867     862     322     230     165
 
BseYI C'CCAG_C

Cuts at:   2173    2690    4684    4852    7475    7971    2173 
   Size:        517    1994     168    2623     496    2474

  Fragments arranged by size: 

                2623    2474    1994     517     496     168
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:   1163    1736    2944    2996    3672    3972    4343    4659    1163 
   Size:        573    1208      52     676     300     371     316    4776

  Fragments arranged by size: 

                4776    1208     676     573     371     316     300      52
            
 
BsiEI CG_ry'CG

Cuts at:   1540    1815    2001    2774    4900    5722    6483    7511    1540 
   Size:        275     186     773    2126     822     761    1028    2301

  Fragments arranged by size: 

                2301    2126    1028     822     773     761     275     186
            
 
BsiHKAI G_wGCw'C

Cuts at:   3376    3405    4481    5355    6333    6418    7489    3376 
   Size:         29    1076     874     978      85    1071    4159

  Fragments arranged by size: 

                4159    1076    1071     978     874      85      29
 
BsmI GAATG_Cn'

Cuts at:   5783    5876    5783 
   Size:         93    8179
 
Bsp1286I G_dGCh'C

Cuts at:   1391    1790    2301    2532    2612    2661    3376    3405    3782 
   Size:        399     511     231      80      49     715      29     377

Cuts at:   3782    4481    4824    5031    5355    5591    6333    6418    7489 
   Size:        699     343     207     324     236     742      85    1071

Cuts at:   7489    1391 
   Size:       2174

  Fragments arranged by size: 

                2174    1071     742     715     699     511     399     377
                 343     324     236     231     207      85      80      49
                  29
 
BspEI T'CCGG_A

Cuts at:   4690    7935    4690 
   Size:       3245    5027
 
BspHI T'CATG_A

Cuts at:   4083    6161    7891    4083 
   Size:       2078    1730    4464

  Fragments arranged by size: 

                4464    2078    1730
 
BspMI ACCTGCnnnn'nnnn_

Cuts at:    844    3371    3865    5627     844 
   Size:       2527     494    1762    3489

  Fragments arranged by size: 

                3489    2527    1762     494
 
BsrBI CCG'CTC

Cuts at:   1394    1823    4869    4916    6159    1394 
   Size:        429    3046      47    1243    3507

  Fragments arranged by size: 

                3507    3046    1243     429      47
 
BsrDI GCAATG_nn'

Cuts at:     65    1248    2035    2241    6767    6941      65 
   Size:       1183     787     206    4526     174    1396

  Fragments arranged by size: 

                4526    1396    1183     787     206     174
 
BsrFI r'CCGG_y

Cuts at:   1700    1810    3850    5553    6916    7103    1700 
   Size:        110    2040    1703    1363     187    2869

  Fragments arranged by size: 

                2869    2040    1703    1363     187     110
 
BsrGI T'GTAC_A

Cuts at:     96    3053      96 
   Size:       2957    5315
 
BssHII G'CGCG_C

Cuts at:   1925    1925 
   Size:       8272
 
BssSI C'ACGA_G

Cuts at:   3701    6332    7344    3701 
   Size:       2631    1012    4629

  Fragments arranged by size: 

                4629    2631    1012
 
BstAPI GCAn_nnn'nTGC

Cuts at:    794    3872    4929     794 
   Size:       3078    1057    4137

  Fragments arranged by size: 

                4137    3078    1057
 
BstBI TT'CG_AA

Cuts at:   2092    7076    2092 
   Size:       4984    3288
 
BstEII G'GTnAC_C

Cuts at:   1184    4876    1184 
   Size:       3692    4580
 
BstYI r'GATC_y

Cuts at:   1972    2553    3153    4331    5602    5969    6354    6371    7823 
   Size:        581     600    1178    1271     367     385      17    1452

Cuts at:   7823    7909    7921    8267    1972 
   Size:         86      12     346    1977

  Fragments arranged by size: 

                1977    1452    1271    1178     600     581     385     367
                 346      86      17      12
 
Bsu36I CC'TnA_GG

Cuts at:   2043    3766    2043 
   Size:       1723    6549
 
BtgI C'CryG_G

Cuts at:    513    1065    2004    2254    3633    3669    3797    4938    5431 
   Size:        552     939     250    1379      36     128    1141     493

Cuts at:   5431     513 
   Size:       3354

  Fragments arranged by size: 

                3354    1379    1141     939     552     493     250     128
                  36
 
BtgZI GCGATGnnnnnnnnnn'nnnn_

Cuts at:    487    1170    1226    2487    3978    4086     487 
   Size:        683      56    1261    1491     108    4673

  Fragments arranged by size: 

                4673    1491    1261     683     108      56
 
BtsI GCAGTG_nn'

Cuts at:   2200    3456    5788    6582    6602    2200 
   Size:       1256    2332     794      20    3870

  Fragments arranged by size: 

                3870    2332    1256     794      20
 
ClaI AT'CG_AT

Cuts at:   1554    1554 
   Size:       8272
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:    529     564     529 
   Size:         35    8237
 
DraI TTT'AAA

Cuts at:   5576    5576 
   Size:       8272
 
DraIII CAC_nnn'GTG

Cuts at:   4978    4978 
   Size:       8272
 
DrdI GACnn_nn'nnGTC

Cuts at:    809    1316    7279     809 
   Size:        507    5963    1802

  Fragments arranged by size: 

                5963    1802     507
 
EaeI y'GGCC_r

Cuts at:      8      62    1487    1537    1812    1830    4810    4897    5434 
   Size:         54    1425      50     275      18    2980      87     537

Cuts at:   5434    5719    6608    8237       8 
   Size:        285     889    1629      43

  Fragments arranged by size: 

                2980    1629    1425     889     537     285     275      87
                  54      50      43      18
 
EagI C'GGCC_G

Cuts at:   1537    1812    4897    5719    1537 
   Size:        275    3085     822    4090

  Fragments arranged by size: 

                4090    3085     822     275
 
EarI CTCTTCn'nnn_

Cuts at:   1353    2422    3400    4229    4469    4553    5382    6202    1353 
   Size:       1069     978     829     240      84     829     820    3423

  Fragments arranged by size: 

                3423    1069     978     829     829     820     240      84
            
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:    387    1451    1589    4410    6859    7233    7379     387 
   Size:       1064     138    2821    2449     374     146    1280

  Fragments arranged by size: 

                2821    2449    1280    1064     374     146     138
 
EcoICRI GAG'CTC

Cuts at:   5353    5353 
   Size:       8272
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:   1239    1632    2168    2303    2480    2778    3051    3402    3645 
   Size:        393     536     135     177     298     273     351     243

Cuts at:   3645    3813    4220    4295    4430    4486    4749    4785    5094 
   Size:        168     407      75     135      56     263      36     309

Cuts at:   5094    5112    6335    6932    7719    7987    1239 
   Size:         18    1223     597     787     268    1524

  Fragments arranged by size: 

                1524    1223     787     597     536     407     393     351
                 309     298     273     268     263     243     177     168
                 135     135      75      56      36      18
 
EcoNI CCTnn'n_nnAGG

Cuts at:   5255    5255 
   Size:       8272
 
EcoO109I rG'GnC_Cy

Cuts at:   2541    2591    4204    4903    5476    5506    2541 
   Size:         50    1613     699     573      30    5307

  Fragments arranged by size: 

                5307    1613     699     573      50      30
 
EcoRI G'AATT_C

Cuts at:   5581    5959    5581 
   Size:        378    7894
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:   5026    5026 
   Size:       8272
 
FspI TGC'GCA

Cuts at:   6778    6778 
   Size:       8272
 
HaeII r_GCGC'y

Cuts at:   1678    2254    2358    2581    3179    4487    5502    5554    7419 
   Size:        576     104     223     598    1308    1015      52    1865

Cuts at:   7419    1678 
   Size:       2531

  Fragments arranged by size: 

                2531    1865    1308    1015     598     576     223     104
                  52
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:   1373    1405    1540    1572    2288    2320    2441    2473    2545 
   Size:         32     135      32     716      32     121      32      72

Cuts at:   2545    2577    3065    3097    3550    3582    3596    3628    4162 
   Size:         32     488      32     453      32      14      32     534

Cuts at:   4162    4194    4640    4672    6913    6945    6987    7019    1373 
   Size:         32     446      32    2241      32      42      32    2626

  Fragments arranged by size: 

                2626    2241     716     534     488     453     446     135
                 121      72      42      32      32      32      32      32
                  32      32      32      32      32      32      32      14
            
 
HincII GTy'rAC

Cuts at:    669    1657    1938    5616    5862     669 
   Size:        988     281    3678     246    3079

  Fragments arranged by size: 

                3678    3079     988     281     246
 
HindIII A'AGCT_T

Cuts at:    748     748 
   Size:       8272
 
HpaI GTT'AAC

Cuts at:   5862    5862 
   Size:       8272
 
KasI G'GCGC_C

Cuts at:   2250    3175    2250 
   Size:        925    7347
 
KpnI G_GTAC'C

Cuts at:   3935    5597    3935 
   Size:       1662    6610
 
MfeI C'AATT_G

Cuts at:   5871    5871 
   Size:       8272
 
MluI A'CGCG_T

Cuts at:   8148    8148 
   Size:       8272
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:   1305    2697    4410    7386    7570    1305 
   Size:       1392    1713    2976     184    2007

  Fragments arranged by size: 

                2976    2007    1713    1392     184
 
MscI TGG'CCA

Cuts at:     10      64    1489    1832    4812      10 
   Size:         54    1425     343    2980    3470

  Fragments arranged by size: 

                3470    2980    1425     343      54
 
MslI CAynn'nnrTG

Cuts at:    518    1166    2396    4770    4937    4973    5283    6230    6589 
   Size:        648    1230    2374     167      36     310     947     359

Cuts at:   6589    6748     518 
   Size:        159    2042

  Fragments arranged by size: 

                2374    2042    1230     947     648     359     310     167
                 159      36
 
MspA1I CmG'CkG

Cuts at:   1606    2173    2256    2396    2865    3671    3833    3863    3899 
   Size:        567      83     140     469     806     162      30      36

Cuts at:   3899    4700    4831    5494    5688    6365    7513    7758    1606 
   Size:        801     131     663     194     677    1148     245    2120

  Fragments arranged by size: 

                2120    1148     806     801     677     663     567     469
                 245     194     162     140     131      83      36      30
            
 
NaeI GCC'GGC

Cuts at:   5555    5555 
   Size:       8272
 
NarI GG'CG_CC

Cuts at:   2251    3176    2251 
   Size:        925    7347
 
NcoI C'CATG_G

Cuts at:    513    1065    2004    3633    3797     513 
   Size:        552     939    1629     164    4988

  Fragments arranged by size: 

                4988    1629     939     552     164
 
NdeI CA'TA_TG

Cuts at:    387     387 
   Size:       8272
 
NgoMIV G'CCGG_C

Cuts at:   5553    5553 
   Size:       8272
 
NheI G'CTAG_C

Cuts at:   1052    1052 
   Size:       8272
 
NotI GC'GGCC_GC

Cuts at:   5719    5719 
   Size:       8272
 
NspI r_CATG'y

Cuts at:   1132    1229    2272    4513    5194    5630    7175    1132 
   Size:         97    1043    2241     681     436    1545    2229

  Fragments arranged by size: 

                2241    2229    1545    1043     681     436      97
 
PasI CC'CwG_GG

Cuts at:   1348    4793    1348 
   Size:       3445    4827
 
PciI A'CATG_T

Cuts at:   7171    7171 
   Size:       8272
 
PflMI CCAn_nnn'nTGG

Cuts at:   1108    3821    4808    4978    1108 
   Size:       2713     987     170    4402

  Fragments arranged by size: 

                4402    2713     987     170
 
PfoI T'CCnGG_A

Cuts at:   4801    4801 
   Size:       8272
 
PmeI GTTT'AAAC

Cuts at:   5576    5576 
   Size:       8272
 
PmlI CAC'GTG

Cuts at:   3217    4311    4460    3217 
   Size:       1094     149    7029

  Fragments arranged by size: 

                7029    1094     149
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:   6341    6373    7854    7886    6341 
   Size:         32    1481      32    6727

  Fragments arranged by size: 

                6727    1481      32      32
 
PpuMI rG'GwC_Cy

Cuts at:   2591    4204    4903    5476    5506    2591 
   Size:       1613     699     573      30    5357

  Fragments arranged by size: 

                5357    1613     699     573      30
 
PshAI GACnn'nnGTC

Cuts at:   1613    1613 
   Size:       8272
 
PsiI TTA'TAA

Cuts at:   5842    5842 
   Size:       8272
 
PspXI vC'TCGA_Gb

Cuts at:   2910    2910 
   Size:       8272
 
PsrI GAACnnnnnnTACnnnnnnn_nnnnn'

Cuts at:   3924    3956    3924 
   Size:         32    8240
 
PstI C_TGCA'G

Cuts at:    830    3245    3862    5624     830 
   Size:       2415     617    1762    3478

  Fragments arranged by size: 

                3478    2415    1762     617
 
PvuI CG_AT'CG

Cuts at:   2001    2001 
   Size:       8272
 
PvuII CAG'CTG

Cuts at:   2173    2396    3833    4700    2173 
   Size:        223    1437     867    5745

  Fragments arranged by size: 

                5745    1437     867     223
 
RsrII CG'GwC_CG

Cuts at:   3848    3848 
   Size:       8272
 
SacI G_AGCT'C

Cuts at:   5355    5355 
   Size:       8272
 
SacII CC_GC'GG

Cuts at:   2257    3672    2257 
   Size:       1415    6857
 
SalI G'TCGA_C

Cuts at:   1936    5614    1936 
   Size:       3678    4594
 
SanDI GG'GwC_CC

Cuts at:   2591    4903    2591 
   Size:       2312    5960
 
SapI GCTCTTCn'nnn_

Cuts at:   4469    4469 
   Size:       8272
 
SbfI CC_TGCA'GG

Cuts at:   5624    5624 
   Size:       8272
 
ScaI AGT'ACT

Cuts at:   6520    8232    6520 
   Size:       1712    6560
 
SexAI A'CCwGG_T

Cuts at:   5542    5542 
   Size:       8272
 
SfcI C'TryA_G

Cuts at:    826    1045    3241    3858    5620    6755    7436    7627     826 
   Size:        219    2196     617    1762    1135     681     191    1471

  Fragments arranged by size: 

                2196    1762    1471    1135     681     617     219     191
            
 
SfoI GGC'GCC

Cuts at:   2252    3177    2252 
   Size:        925    7347
 
SgfI GCG_AT'CGC

Cuts at:   2001    2001 
   Size:       8272
 
SgrAI Cr'CCGG_yG

Cuts at:   1700    1700 
   Size:       8272
 
SmaI CCC'GGG

Cuts at:   1872    3205    5599    1872 
   Size:       1333    2394    4545

  Fragments arranged by size: 

                4545    2394    1333
 
SmlI C'TyrA_G

Cuts at:    820    1017    1943    2910    3149    5330    6376    7277    7539 
   Size:        197     926     967     239    2181    1046     901     262

Cuts at:   7539     820 
   Size:       1553

  Fragments arranged by size: 

                2181    1553    1046     967     926     901     262     239
                 197
 
SnaBI TAC'GTA

Cuts at:    493    6063     493 
   Size:       5570    2702
 
SpeI A'CTAG_T

Cuts at:    152     152 
   Size:       8272
 
SphI G_CATG'C

Cuts at:   1132    2272    5630    1132 
   Size:       1140    3358    3774

  Fragments arranged by size: 

                3774    3358    1140
 
SspI AAT'ATT

Cuts at:      5      52    6196       5 
   Size:         47    6144    2081

  Fragments arranged by size: 

                6144    2081      47
 
StuI AGG'CCT

Cuts at:   1517    4749    1517 
   Size:       3232    5040
 
StyI C'CwwG_G

Cuts at:    513    1065    2004    3094    3633    3797    3970    5711     513 
   Size:        552     939    1090     539     164     173    1741    3074

  Fragments arranged by size: 

                3074    1741    1090     939     552     539     173     164
            
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:    325    1580    2788    4985    5226    5553    6299    6316    6469 
   Size:       1255    1208    2197     241     327     746      17     153

Cuts at:   6469    6654    7099     325 
   Size:        185     445    1498

  Fragments arranged by size: 

                2197    1498    1255    1208     746     445     327     241
                 185     153      17
 
TatI w'GTAC_w

Cuts at:     96     370     450     483     534    1977    3053    3237    6518 
   Size:        274      80      33      51    1443    1076     184    3281

Cuts at:   6518    8230      96 
   Size:       1712     138

  Fragments arranged by size: 

                3281    1712    1443    1076     274     184     138      80
                  51      33
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:   4449    4481    8232    8264    4449 
   Size:         32    3751      32    4457

  Fragments arranged by size: 

                4457    3751      32      32
 
Tth111I GACn'n_nGTC

Cuts at:   1316    1316 
   Size:       8272
 
XbaI T'CTAG_A

Cuts at:   5608    5608 
   Size:       8272
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:   2626    4405    2626 
   Size:       1779    6493
 
XhoI C'TCGA_G

Cuts at:   1943    2910    1943 
   Size:        967    7305
 
XmaI C'CCGG_G

Cuts at:   1870    3203    5597    1870 
   Size:       1333    2394    4545

  Fragments arranged by size: 

                4545    2394    1333
 
XmnI GAAnn'nnTTC

Cuts at:   2877    6401    2877 
   Size:       3524    4748
 
ZraI GAC'GTC

Cuts at:    276     329     412     598    1534    4498    6080     276 
   Size:         53      83     186     936    2964    1582    2468

  Fragments arranged by size: 

                2964    2468    1582     936     186      83      53
 

 Enzymes that do cut:

     AarI    AatII     AccI   Acc65I     AclI     AcuI     AfeI    AflII
   AflIII     AgeI     AhdI     AleI     AlfI    AlwNI    ApaLI     ApoI
     AseI    AsiSI     AvaI    BamHI     BanI    BanII     BbeI     BbsI
     BcgI    BciVI     BclI     BglI    BglII     BlpI Bme1580I    BmgBI
     BmrI     BmtI     BplI     BpmI   Bpu10I    BpuEI     BsaI    BsaAI
    BsaBI    BsaHI    BsaWI    BsaXI    BseRI    BseYI     BsgI    BsiEI
  BsiHKAI     BsmI Bsp1286I    BspEI    BspHI    BspMI    BsrBI    BsrDI
    BsrFI    BsrGI   BssHII    BssSI   BstAPI    BstBI   BstEII    BstYI
   Bsu36I     BtgI    BtgZI     BtsI     ClaI    CspCI     DraI   DraIII
     DrdI     EaeI     EagI     EarI     EciI  EcoICRI  Eco57MI    EcoNI
 EcoO109I    EcoRI     FalI     FspI    HaeII    Hin4I   HincII  HindIII
     HpaI     KasI     KpnI     MfeI     MluI     MmeI     MscI     MslI
   MspA1I     NaeI     NarI     NcoI     NdeI   NgoMIV     NheI     NotI
     NspI     PasI     PciI    PflMI     PfoI     PmeI     PmlI     PpiI
    PpuMI    PshAI     PsiI    PspXI     PsrI     PstI     PvuI    PvuII
    RsrII     SacI    SacII     SalI    SanDI     SapI     SbfI     ScaI
    SexAI     SfcI     SfoI     SgfI    SgrAI     SmaI     SmlI    SnaBI
     SpeI     SphI     SspI     StuI     StyI    TaqII     TatI     TstI
  Tth111I     XbaI     XcmI     XhoI     XmaI     XmnI     ZraI

 Enzymes that do not cut: 

     AloI     ApaI     AscI    AvrII     BaeI    BbvCI    BfrBI    BsiWI
    BsmBI    BstXI  BstZ17I    EcoRV     FseI    FspAI     NruI     NsiI
     PacI   PspOMI     SfiI     SrfI     SwaI
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