Result of FASTA (omim) for
pFN21ASDA1029
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KSDA1029, 903 aa
1>>>pF1KSDA1029 903 - 903 aa - 903 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 17.0198+/-0.000498; mu= -30.7199+/- 0.031
mean_var=871.7178+/-181.062, 0's: 0 Z-trim(124.7): 87 B-trim: 0 in 0/62
Lambda= 0.043440
statistics sampled from 46805 (46916) to 46805 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.798), E-opt: 0.2 (0.55), width: 16
Scan time: 18.220
The best scores are: opt bits E(85289)
XP_005268427 (OMIM: 608155) PREDICTED: synaptopodi ( 903) 6166 402.4 5e-111
NP_009217 (OMIM: 608155) synaptopodin isoform A [H ( 903) 6166 402.4 5e-111
XP_005268428 (OMIM: 608155) PREDICTED: synaptopodi ( 903) 6166 402.4 5e-111
XP_006714818 (OMIM: 608155) PREDICTED: synaptopodi (1147) 6166 402.5 6e-111
XP_016864497 (OMIM: 608155) PREDICTED: synaptopodi (1147) 6166 402.5 6e-111
XP_016864496 (OMIM: 608155) PREDICTED: synaptopodi (1147) 6166 402.5 6e-111
NP_001103444 (OMIM: 608155) synaptopodin isoform B ( 685) 4507 298.3 8.1e-80
XP_011535854 (OMIM: 608155) PREDICTED: synaptopodi ( 929) 4507 298.5 1e-79
NP_001159680 (OMIM: 608155) synaptopodin isoform C ( 929) 4507 298.5 1e-79
NP_001159681 (OMIM: 608155) synaptopodin isoform C ( 929) 4507 298.5 1e-79
XP_011536691 (OMIM: 601234) PREDICTED: nascent pol (2078) 466 45.5 0.0032
XP_006719476 (OMIM: 601234) PREDICTED: nascent pol (2082) 466 45.5 0.0032
XP_006719475 (OMIM: 601234) PREDICTED: nascent pol (2082) 466 45.5 0.0032
XP_006719477 (OMIM: 601234) PREDICTED: nascent pol (2082) 466 45.5 0.0032
>>XP_005268427 (OMIM: 608155) PREDICTED: synaptopodin is (903 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2114.2 bits: 402.4 E(85289): 5e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:1-903)
10 20 30 40 50 60
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
850 860 870 880 890 900
pF1KSD CTT
:::
XP_005 CTT
>>NP_009217 (OMIM: 608155) synaptopodin isoform A [Homo (903 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2114.2 bits: 402.4 E(85289): 5e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:1-903)
10 20 30 40 50 60
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
850 860 870 880 890 900
pF1KSD CTT
:::
NP_009 CTT
>>XP_005268428 (OMIM: 608155) PREDICTED: synaptopodin is (903 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2114.2 bits: 402.4 E(85289): 5e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:1-903)
10 20 30 40 50 60
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
670 680 690 700 710 720
730 740 750 760 770 780
pF1KSD PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENP
730 740 750 760 770 780
790 800 810 820 830 840
pF1KSD RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RPFSPPRAPPPPPPPPPPPPRMRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRS
790 800 810 820 830 840
850 860 870 880 890 900
pF1KSD PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGSLPAEAS
850 860 870 880 890 900
pF1KSD CTT
:::
XP_005 CTT
>>XP_006714818 (OMIM: 608155) PREDICTED: synaptopodin is (1147 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2112.9 bits: 402.5 E(85289): 6e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:245-1147)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
XP_006 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
880 890 900 910 920 930
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
940 950 960 970 980 990
760 770 780 790 800 810
pF1KSD RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
1000 1010 1020 1030 1040 1050
820 830 840 850 860 870
pF1KSD GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
1060 1070 1080 1090 1100 1110
880 890 900
pF1KSD SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
:::::::::::::::::::::::::::::::::
XP_006 SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
1120 1130 1140
>>XP_016864497 (OMIM: 608155) PREDICTED: synaptopodin is (1147 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2112.9 bits: 402.5 E(85289): 6e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:245-1147)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
XP_016 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
880 890 900 910 920 930
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
940 950 960 970 980 990
760 770 780 790 800 810
pF1KSD RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
1000 1010 1020 1030 1040 1050
820 830 840 850 860 870
pF1KSD GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
1060 1070 1080 1090 1100 1110
880 890 900
pF1KSD SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
:::::::::::::::::::::::::::::::::
XP_016 SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
1120 1130 1140
>>XP_016864496 (OMIM: 608155) PREDICTED: synaptopodin is (1147 aa)
initn: 6166 init1: 6166 opt: 6166 Z-score: 2112.9 bits: 402.5 E(85289): 6e-111
Smith-Waterman score: 6166; 100.0% identity (100.0% similar) in 903 aa overlap (1-903:245-1147)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
XP_016 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
880 890 900 910 920 930
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
940 950 960 970 980 990
760 770 780 790 800 810
pF1KSD RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRMRSPQPARP
1000 1010 1020 1030 1040 1050
820 830 840 850 860 870
pF1KSD GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAK
1060 1070 1080 1090 1100 1110
880 890 900
pF1KSD SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
:::::::::::::::::::::::::::::::::
XP_016 SPGILGYNICPRGWNGSLRLKRGSLPAEASCTT
1120 1130 1140
>>NP_001103444 (OMIM: 608155) synaptopodin isoform B [Ho (685 aa)
initn: 4506 init1: 4506 opt: 4507 Z-score: 1553.9 bits: 298.3 E(85289): 8.1e-80
Smith-Waterman score: 4507; 99.3% identity (99.6% similar) in 682 aa overlap (1-682:1-682)
10 20 30 40 50 60
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEGYSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSSPAPPPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KSD EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EVHSPAADVNQNLASPSATLTTPTSNSSHNPPATDVNQNPPATVVPQSLPLSSIQQNSSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KSD AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQLPSNGTGPASKPSTLCADGQPQAPAEEVRCSTLLIDKVSTPATTTSTFSREATLIPSS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KSD RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPPASDFMSSSLLIDIQPNTLVVSADQEMSGRAAATTPTKVYSEVHFTLAKPPSVVNRTA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KSD RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPFGIQAPGGTSQMERSPMLERRHFGEKAPAPQPPSLPDRSPRPQRHIMSRSPMVERRMM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KSD GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GQRSPASERRPLGNFTAPPTYTETLSTAPLASWVRSPPSYSVLYPSSDPKSSHLKGQAVP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KSD ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEVGVEEEP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KSD FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FALGAEASNFQQEPAPRDRASPAAAEEVVPEWASCLKSPRIQAKPKPKPNQNLSEASGKG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KSD AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AELYARRQSRMEKYVIESSSHTPELARCPSPTMSLPSSWKYPTNAPGAFRVASRSPARTP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KSD PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PASLYHGYLPENGVLRPEPTKQPPYQLRPSLFVLSPIKEPAKVSPRAASPAKPSSLDLVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KSD NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLPKGALPPSPALPRPSRSSPGLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KSD APRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPP
:::::::::::::::: . :.
NP_001 APRPSFSTRNAGIEAQVWKPSFCFK
670 680
>>XP_011535854 (OMIM: 608155) PREDICTED: synaptopodin is (929 aa)
initn: 4506 init1: 4506 opt: 4507 Z-score: 1552.2 bits: 298.5 E(85289): 1e-79
Smith-Waterman score: 4507; 99.3% identity (99.6% similar) in 682 aa overlap (1-682:245-926)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
XP_011 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
:::::::::::::::::::::::::::::::::::::::::::::: . :.
XP_011 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
880 890 900 910 920
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
>>NP_001159680 (OMIM: 608155) synaptopodin isoform C [Ho (929 aa)
initn: 4506 init1: 4506 opt: 4507 Z-score: 1552.2 bits: 298.5 E(85289): 1e-79
Smith-Waterman score: 4507; 99.3% identity (99.6% similar) in 682 aa overlap (1-682:245-926)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
NP_001 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
:::::::::::::::::::::::::::::::::::::::::::::: . :.
NP_001 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
880 890 900 910 920
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
>>NP_001159681 (OMIM: 608155) synaptopodin isoform C [Ho (929 aa)
initn: 4506 init1: 4506 opt: 4507 Z-score: 1552.2 bits: 298.5 E(85289): 1e-79
Smith-Waterman score: 4507; 99.3% identity (99.6% similar) in 682 aa overlap (1-682:245-926)
10 20 30
pF1KSD MEGYSEEASLLRHLEKVASEEEEVPLVVYL
::::::::::::::::::::::::::::::
NP_001 LSLSSTSLPEPGPPRHPSPQSPDRGVPGHSMEGYSEEASLLRHLEKVASEEEEVPLVVYL
220 230 240 250 260 270
40 50 60 70 80 90
pF1KSD KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KENAALLTANGLHLSQNREAQQSSPAPPPAEVHSPAADVNQNLASPSATLTTPTSNSSHN
280 290 300 310 320 330
100 110 120 130 140 150
pF1KSD PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PPATDVNQNPPATVVPQSLPLSSIQQNSSEAQLPSNGTGPASKPSTLCADGQPQAPAEEV
340 350 360 370 380 390
160 170 180 190 200 210
pF1KSD RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCSTLLIDKVSTPATTTSTFSREATLIPSSRPPASDFMSSSLLIDIQPNTLVVSADQEMS
400 410 420 430 440 450
220 230 240 250 260 270
pF1KSD GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GRAAATTPTKVYSEVHFTLAKPPSVVNRTARPFGIQAPGGTSQMERSPMLERRHFGEKAP
460 470 480 490 500 510
280 290 300 310 320 330
pF1KSD APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APQPPSLPDRSPRPQRHIMSRSPMVERRMMGQRSPASERRPLGNFTAPPTYTETLSTAPL
520 530 540 550 560 570
340 350 360 370 380 390
pF1KSD ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASWVRSPPSYSVLYPSSDPKSSHLKGQAVPASKTGILEESMARRGSRKSMFTFVEKPKVT
580 590 600 610 620 630
400 410 420 430 440 450
pF1KSD PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PNPDLLDLVQTADEKRRQRDQGEVGVEEEPFALGAEASNFQQEPAPRDRASPAAAEEVVP
640 650 660 670 680 690
460 470 480 490 500 510
pF1KSD EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EWASCLKSPRIQAKPKPKPNQNLSEASGKGAELYARRQSRMEKYVIESSSHTPELARCPS
700 710 720 730 740 750
520 530 540 550 560 570
pF1KSD PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLRPS
760 770 780 790 800 810
580 590 600 610 620 630
pF1KSD LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFVLSPIKEPAKVSPRAASPAKPSSLDLVPNLPKGALPPSPALPRPSRSSPGLYTSPGQD
820 830 840 850 860 870
640 650 660 670 680 690
pF1KSD SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTP
:::::::::::::::::::::::::::::::::::::::::::::: . :.
NP_001 SLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQVWKPSFCFK
880 890 900 910 920
700 710 720 730 740 750
pF1KSD GASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPPS
903 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 04:40:22 2016 done: Thu Nov 3 04:40:25 2016
Total Scan time: 18.220 Total Display time: 0.280
Function used was FASTA [36.3.4 Apr, 2011]