Result of FASTA (nr) for
pF1KB9781
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9781, 120 aa
1>>>pF1KB9781 120 - 120 aa - 120 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6777+/-0.000171; mu= 8.4722+/- 0.009
mean_var=61.2211+/-11.644, 0's: 46 Z-trim(122.8): 56 B-trim: 2280 in 1/65
Lambda= 0.163917
statistics sampled from 60000 (160601) to 8627616 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.72), E-opt: 0.2 (0.335), width: 16
Scan time: 403.980
The best scores are: opt bits E(25779625)
gi|4503035|ref|NP_001301.1| cAMP-responsive elemen ( 120) 791 194.9 8.2e-48
gi|466065019|ref|XP_004281186.1| PREDICTED: cAMP-r ( 120) 785 193.4 2.2e-47
gi|395850501|ref|XP_003797823.1| PREDICTED: cAMP-r ( 120) 785 193.4 2.2e-47
gi|296210940|ref|XP_002752177.1| PREDICTED: cAMP-r ( 120) 785 193.4 2.2e-47
gi|73997627|ref|XP_853938.1| PREDICTED: cAMP respo ( 120) 785 193.4 2.2e-47
gi|115497320|ref|NP_001069556.1| cAMP-responsive e ( 120) 779 192.0 5.9e-47
gi|403286615|ref|XP_003934575.1| PREDICTED: cAMP-r ( 120) 779 192.0 5.9e-47
gi|355564025|gb|EHH20525.1| cAMP-responsive elemen ( 119) 776 191.3 9.5e-47
gi|488554516|ref|XP_004468322.1| PREDICTED: cAMP-r ( 120) 765 188.7 5.8e-46
gi|149049195|gb|EDM01649.1| cAMP responsive elemen ( 119) 764 188.5 6.8e-46
gi|62543539|ref|NP_001015027.1| cAMP-responsive el ( 123) 764 188.5 7e-46
gi|471411654|ref|XP_004387380.1| PREDICTED: cAMP-r ( 120) 760 187.5 1.3e-45
gi|119616674|gb|EAW96268.1| cAMP responsive elemen ( 122) 758 187.0 1.9e-45
gi|291392618|ref|XP_002712697.1| PREDICTED: cAMP r ( 129) 754 186.1 3.8e-45
gi|123779987|sp|Q32M00.1|CRBL2_MOUSE RecName: Full ( 123) 752 185.6 5e-45
gi|281349900|gb|EFB25484.1| hypothetical protein P ( 115) 742 183.3 2.4e-44
gi|29244124|ref|NP_808355.1| cAMP-responsive eleme ( 123) 741 183.0 3e-44
gi|348569148|ref|XP_003470360.1| PREDICTED: hypoth ( 251) 744 183.8 3.6e-44
gi|301765222|ref|XP_002918035.1| PREDICTED: cAMP-r ( 139) 740 182.8 4e-44
gi|440910733|gb|ELR60495.1| cAMP-responsive elemen ( 115) 736 181.8 6.5e-44
gi|354478198|ref|XP_003501302.1| PREDICTED: hypoth ( 297) 738 182.4 1.1e-43
gi|488554513|ref|XP_004468321.1| PREDICTED: cAMP-r ( 131) 733 181.1 1.2e-43
gi|488554519|ref|XP_004468323.1| PREDICTED: cAMP-r ( 115) 731 180.7 1.5e-43
gi|350534652|ref|NP_001232390.1| putative cAMP res ( 120) 722 178.5 6.7e-43
gi|344266638|ref|XP_003405387.1| PREDICTED: cAMP-r ( 164) 723 178.8 7.6e-43
gi|495529344|ref|NP_001265039.1| cAMP-responsive e ( 120) 721 178.3 7.9e-43
gi|326912501|ref|XP_003202588.1| PREDICTED: cAMP-r ( 120) 716 177.1 1.8e-42
gi|327286905|ref|XP_003228170.1| PREDICTED: cAMP-r ( 121) 709 175.5 5.7e-42
gi|395538715|ref|XP_003771320.1| PREDICTED: cAMP-r ( 118) 708 175.2 6.5e-42
gi|334348321|ref|XP_001371411.2| PREDICTED: cAMP-r ( 178) 710 175.7 6.9e-42
gi|449271876|gb|EMC82061.1| cAMP-responsive elemen ( 123) 691 171.2 1.1e-40
gi|483524223|gb|EOB08276.1| cAMP-responsive elemen ( 116) 687 170.3 2e-40
gi|351711400|gb|EHB14319.1| cAMP-responsive elemen ( 115) 686 170.0 2.4e-40
gi|387914186|gb|AFK10702.1| cAMP-responsive elemen ( 126) 684 169.6 3.6e-40
gi|392874494|gb|AFM86079.1| cAMP-responsive elemen ( 119) 681 168.8 5.5e-40
gi|465990724|gb|EMP38475.1| cAMP-responsive elemen ( 174) 681 168.9 7.8e-40
gi|148539951|ref|NP_001002702.2| cAMP-responsive e ( 119) 644 160.1 2.4e-37
gi|213512822|ref|NP_001133387.1| cAMP-responsive e ( 110) 637 158.4 6.9e-37
gi|345322064|ref|XP_001508734.2| PREDICTED: cAMP-r ( 213) 630 156.8 4e-36
gi|410926231|ref|XP_003976582.1| PREDICTED: cAMP-r ( 122) 626 155.8 4.6e-36
gi|148235100|ref|NP_001090852.1| cAMP-responsive e ( 118) 623 155.1 7.4e-36
gi|47209729|emb|CAF90679.1| unnamed protein produc ( 98) 621 154.6 8.6e-36
gi|432964895|ref|XP_004087023.1| PREDICTED: cAMP-r ( 121) 619 154.2 1.5e-35
gi|499028484|ref|XP_004564967.1| PREDICTED: cAMP-r ( 121) 602 150.2 2.4e-34
gi|348522570|ref|XP_003448797.1| PREDICTED: cAMP-r ( 122) 602 150.2 2.4e-34
gi|499028486|ref|XP_004564968.1| PREDICTED: cAMP-r ( 116) 590 147.3 1.6e-33
gi|345322062|ref|XP_003430529.1| PREDICTED: hypoth ( 239) 482 121.8 1.5e-25
gi|149049194|gb|EDM01648.1| cAMP responsive elemen ( 84) 460 116.5 2.2e-24
gi|148678582|gb|EDL10529.1| cAMP responsive elemen ( 84) 460 116.5 2.2e-24
gi|291233021|ref|XP_002736447.1| PREDICTED: cAMP r ( 135) 461 116.8 2.8e-24
>>gi|4503035|ref|NP_001301.1| cAMP-responsive element-bi (120 aa)
initn: 791 init1: 791 opt: 791 Z-score: 1023.9 bits: 194.9 E(25779625): 8.2e-48
Smith-Waterman score: 791; 100.0% identity (100.0% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|450 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|450 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
70 80 90 100 110 120
>>gi|466065019|ref|XP_004281186.1| PREDICTED: cAMP-respo (120 aa)
initn: 785 init1: 785 opt: 785 Z-score: 1016.2 bits: 193.4 E(25779625): 2.2e-47
Smith-Waterman score: 785; 99.2% identity (99.2% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|466 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
gi|466 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHLKAGKTDANSNSW
70 80 90 100 110 120
>>gi|395850501|ref|XP_003797823.1| PREDICTED: cAMP-respo (120 aa)
initn: 785 init1: 785 opt: 785 Z-score: 1016.2 bits: 193.4 E(25779625): 2.2e-47
Smith-Waterman score: 785; 99.2% identity (99.2% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|395 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::
gi|395 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHPKAGKTDANSNSW
70 80 90 100 110 120
>>gi|296210940|ref|XP_002752177.1| PREDICTED: cAMP-respo (120 aa)
initn: 785 init1: 785 opt: 785 Z-score: 1016.2 bits: 193.4 E(25779625): 2.2e-47
Smith-Waterman score: 785; 99.2% identity (100.0% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|296 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEHNKSQQNSSRHTKAGKTDANSNSW
70 80 90 100 110 120
>>gi|73997627|ref|XP_853938.1| PREDICTED: cAMP responsiv (120 aa)
initn: 785 init1: 785 opt: 785 Z-score: 1016.2 bits: 193.4 E(25779625): 2.2e-47
Smith-Waterman score: 785; 99.2% identity (100.0% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
gi|739 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQSKSQQNSSRHTKAGKTDANSNSW
70 80 90 100 110 120
>>gi|115497320|ref|NP_001069556.1| cAMP-responsive eleme (120 aa)
initn: 779 init1: 779 opt: 779 Z-score: 1008.6 bits: 192.0 E(25779625): 5.9e-47
Smith-Waterman score: 779; 98.3% identity (99.2% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
:::::::::::::::::::::::::::::::::::::.::::::::: ::::::::::::
gi|115 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQSKSQQNSSRHMKAGKTDANSNSW
70 80 90 100 110 120
>>gi|403286615|ref|XP_003934575.1| PREDICTED: cAMP-respo (120 aa)
initn: 779 init1: 779 opt: 779 Z-score: 1008.6 bits: 192.0 E(25779625): 5.9e-47
Smith-Waterman score: 779; 98.3% identity (100.0% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|403 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::::::::::..::::::::::::::::::::::
gi|403 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEHSKSQQNSSRHTKAGKTDANSNSW
70 80 90 100 110 120
>>gi|355564025|gb|EHH20525.1| cAMP-responsive element-bi (119 aa)
initn: 776 init1: 776 opt: 776 Z-score: 1004.8 bits: 191.3 E(25779625): 9.5e-47
Smith-Waterman score: 776; 100.0% identity (100.0% similar) in 119 aa overlap (1-119:1-119)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|355 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNS
70 80 90 100 110
>>gi|488554516|ref|XP_004468322.1| PREDICTED: cAMP-respo (120 aa)
initn: 765 init1: 765 opt: 765 Z-score: 990.7 bits: 188.7 E(25779625): 5.8e-46
Smith-Waterman score: 765; 95.8% identity (100.0% similar) in 120 aa overlap (1-120:1-120)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|488 MDDSKMVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
:::::::::::::::::::::::::::::::::::::.::::.::::::::::.::.:::
gi|488 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQSKSQQSSSRHTKAGKTEANNNSW
70 80 90 100 110 120
>>gi|149049195|gb|EDM01649.1| cAMP responsive element bi (119 aa)
initn: 764 init1: 764 opt: 764 Z-score: 989.5 bits: 188.5 E(25779625): 6.8e-46
Smith-Waterman score: 764; 97.5% identity (99.2% similar) in 119 aa overlap (1-119:1-119)
10 20 30 40 50 60
pF1KB9 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 MDDSKVVGGKVKKPGKRGRKPAKIDLKAKLERSRQSARECRARKKLRYQYLEELVSSRER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 AICALREELEMYKQWCMAMDQGKIPSEIKALLTGEEQNKSQQNSSRHTKAGKTDANSNSW
::::::::::::::::::::::::::::.:::::::::::::::::: ::::::::.::
gi|149 AICALREELEMYKQWCMAMDQGKIPSEIRALLTGEEQNKSQQNSSRHPKAGKTDANTNS
70 80 90 100 110
120 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Mon May 27 04:47:18 2013 done: Mon May 27 04:48:19 2013
Total Scan time: 403.980 Total Display time: -0.720
Function used was FASTA [36.3.4 Apr, 2011]