Result of FASTA (nr) for
pF1KB8302
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB8302, 225 aa
1>>>pF1KB8302 225 - 225 aa - 225 aa
Library: nr
8900870272 residues in 25779625 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.3489+/-0.00017; mu= 8.1642+/- 0.009
mean_var=64.9274+/-12.626, 0's: 47 Z-trim(121.6): 139 B-trim: 2223 in 1/64
Lambda= 0.159170
statistics sampled from 60000 (142160) to 7433625 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.289), width: 16
Scan time: 536.750
The best scores are: opt bits E(25779625)
gi|12052963|emb|CAB66656.1| hypothetical protein [ ( 225) 1522 358.0 2.2e-96
gi|62901948|gb|AAY18925.1| DKFZp566L1246 [syntheti ( 249) 1515 356.4 7.6e-96
gi|27886676|ref|NP_775286.1| Kv channel-interactin ( 225) 1504 353.8 3.9e-95
gi|296221071|ref|XP_002756592.1| PREDICTED: Kv cha ( 225) 1498 352.5 1e-94
gi|14041963|dbj|BAB55052.1| unnamed protein produc ( 225) 1498 352.5 1e-94
gi|410975966|ref|XP_003994398.1| PREDICTED: Kv cha ( 225) 1497 352.2 1.2e-94
gi|472364901|ref|XP_004402010.1| PREDICTED: Kv cha ( 288) 1497 352.2 1.5e-94
gi|109090367|ref|XP_001111683.1| PREDICTED: Kv cha ( 225) 1494 351.6 1.9e-94
gi|335302149|ref|XP_003359394.1| PREDICTED: Kv cha ( 225) 1493 351.3 2.3e-94
gi|344274813|ref|XP_003409209.1| PREDICTED: Kv cha ( 225) 1493 351.3 2.3e-94
gi|149689738|ref|XP_001499459.1| PREDICTED: Kv cha ( 225) 1492 351.1 2.7e-94
gi|444909156|ref|NP_001263287.1| Kv channel-intera ( 225) 1485 349.5 8.1e-94
gi|354491928|ref|XP_003508105.1| PREDICTED: Kv cha ( 225) 1483 349.0 1.1e-93
gi|351715605|gb|EHB18524.1| Kv channel-interacting ( 225) 1482 348.8 1.3e-93
gi|466002136|ref|XP_004268542.1| PREDICTED: Kv cha ( 225) 1478 347.9 2.5e-93
gi|488509731|ref|XP_004446972.1| PREDICTED: Kv cha ( 277) 1479 348.1 2.6e-93
gi|395828217|ref|XP_003787282.1| PREDICTED: Kv cha ( 225) 1477 347.6 2.9e-93
gi|471359087|ref|XP_004370123.1| PREDICTED: Kv cha ( 225) 1468 345.6 1.2e-92
gi|348578575|ref|XP_003475058.1| PREDICTED: Kv cha ( 225) 1458 343.3 6e-92
gi|126273224|ref|XP_001369622.1| PREDICTED: Kv cha ( 225) 1443 339.8 6.5e-91
gi|194376404|dbj|BAG62961.1| unnamed protein produ ( 225) 1407 331.6 2e-88
gi|291404702|ref|XP_002718722.1| PREDICTED: Kv cha ( 217) 1390 327.7 2.9e-87
gi|466002130|ref|XP_004268541.1| PREDICTED: Kv cha ( 228) 1381 325.6 1.3e-86
gi|326923792|ref|XP_003208118.1| PREDICTED: Kv cha ( 225) 1380 325.4 1.5e-86
gi|193786182|dbj|BAG51465.1| unnamed protein produ ( 270) 1316 310.7 4.7e-82
gi|27886670|ref|NP_775283.1| Kv channel-interactin ( 270) 1316 310.7 4.7e-82
gi|119570124|gb|EAW49739.1| Kv channel interacting ( 276) 1316 310.7 4.8e-82
gi|21361460|ref|NP_055406.2| Kv channel-interactin ( 285) 1316 310.7 5e-82
gi|119570125|gb|EAW49740.1| Kv channel interacting ( 291) 1316 310.7 5.1e-82
gi|7259289|dbj|BAA92744.1| A-type potassium channe ( 270) 1310 309.3 1.2e-81
gi|471359079|ref|XP_004370119.1| PREDICTED: Kv cha ( 270) 1309 309.1 1.4e-81
gi|308235939|ref|NP_001184119.1| Kv channel-intera ( 270) 1309 309.1 1.4e-81
gi|478507510|ref|XP_004428042.1| PREDICTED: Kv cha ( 270) 1309 309.1 1.4e-81
gi|410975968|ref|XP_003994399.1| PREDICTED: Kv cha ( 285) 1309 309.1 1.5e-81
gi|478507508|ref|XP_004428041.1| PREDICTED: Kv cha ( 285) 1309 309.1 1.5e-81
gi|471359077|ref|XP_004370118.1| PREDICTED: Kv cha ( 285) 1309 309.1 1.5e-81
gi|478507506|ref|XP_004428040.1| PREDICTED: Kv cha ( 294) 1309 309.1 1.6e-81
gi|302563331|ref|NP_001181449.1| Kv channel-intera ( 270) 1306 308.4 2.3e-81
gi|109090357|ref|XP_001111523.1| PREDICTED: Kv cha ( 285) 1306 308.4 2.4e-81
gi|27886672|ref|NP_775284.1| Kv channel-interactin ( 252) 1305 308.2 2.5e-81
gi|54697044|gb|AAV38894.1| Kv channel interacting ( 253) 1305 308.2 2.5e-81
gi|335302155|ref|XP_003359397.1| PREDICTED: Kv cha ( 270) 1305 308.1 2.7e-81
gi|466002099|ref|XP_004268536.1| PREDICTED: Kv cha ( 285) 1305 308.1 2.9e-81
gi|194041899|ref|XP_001928158.1| PREDICTED: Kv cha ( 285) 1305 308.1 2.9e-81
gi|440912416|gb|ELR61986.1| Kv channel-interacting ( 294) 1305 308.1 3e-81
gi|9309285|dbj|BAA96740.1| potassium channel-inter ( 270) 1304 307.9 3.2e-81
gi|149689728|ref|XP_001499442.1| PREDICTED: Kv cha ( 270) 1304 307.9 3.2e-81
gi|9309281|dbj|BAA96738.1| potassium channel-inter ( 270) 1304 307.9 3.2e-81
gi|149689730|ref|XP_001499453.1| PREDICTED: Kv cha ( 285) 1304 307.9 3.4e-81
gi|27886678|ref|NP_775287.1| Kv channel-interactin ( 220) 1301 307.2 4.2e-81
>>gi|12052963|emb|CAB66656.1| hypothetical protein [Homo (225 aa)
initn: 1522 init1: 1522 opt: 1522 Z-score: 1895.7 bits: 358.0 E(25779625): 2.2e-96
Smith-Waterman score: 1522; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|120 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::::::::::::::::::::::::::::
gi|120 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|62901948|gb|AAY18925.1| DKFZp566L1246 [synthetic co (249 aa)
initn: 1515 init1: 1515 opt: 1515 Z-score: 1886.3 bits: 356.4 E(25779625): 7.6e-96
Smith-Waterman score: 1515; 100.0% identity (100.0% similar) in 224 aa overlap (2-225:26-249)
10 20 30
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEF
:::::::::::::::::::::::::::::::::::
gi|629 MKHHHHHHHSDYDIPTTENLYFQGSNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEF
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB8 ESSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 ESSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDS
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB8 STYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 STYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEM
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB8 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|629 LDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMR
190 200 210 220 230 240
220
pF1KB8 SMQLFDNVI
:::::::::
gi|629 SMQLFDNVI
>>gi|27886676|ref|NP_775286.1| Kv channel-interacting pr (225 aa)
initn: 1504 init1: 1504 opt: 1504 Z-score: 1873.4 bits: 353.8 E(25779625): 3.9e-95
Smith-Waterman score: 1504; 99.1% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|278 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|278 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|278 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
gi|278 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|296221071|ref|XP_002756592.1| PREDICTED: Kv channel (225 aa)
initn: 1498 init1: 1498 opt: 1498 Z-score: 1866.0 bits: 352.5 E(25779625): 1e-94
Smith-Waterman score: 1498; 98.7% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|296 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|296 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
gi|296 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|14041963|dbj|BAB55052.1| unnamed protein product [H (225 aa)
initn: 1498 init1: 1498 opt: 1498 Z-score: 1866.0 bits: 352.5 E(25779625): 1e-94
Smith-Waterman score: 1498; 98.7% identity (98.7% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
:::::::::::::::::::::::::::::: :::::: ::::::::::::::::::::::
gi|140 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDRVDDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|140 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
gi|140 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|410975966|ref|XP_003994398.1| PREDICTED: Kv channel (225 aa)
initn: 1497 init1: 1497 opt: 1497 Z-score: 1864.7 bits: 352.2 E(25779625): 1.2e-94
Smith-Waterman score: 1497; 98.2% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|410 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|410 VAGLSVILRGTIDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
gi|410 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|472364901|ref|XP_004402010.1| PREDICTED: Kv channel (288 aa)
initn: 1497 init1: 1497 opt: 1497 Z-score: 1862.8 bits: 352.2 E(25779625): 1.5e-94
Smith-Waterman score: 1497; 98.2% identity (99.1% similar) in 225 aa overlap (1-225:64-288)
10 20 30
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPD
::::::::::::::::::::::::::::::
gi|472 RPRRAHWSGGGDPTARALGAELRQCALSRTMNRCPRRCRSPLGQAARSLYQLVTGSLSPD
40 50 60 70 80 90
40 50 60 70 80 90
pF1KB8 SVDDEFESSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQF
::.:::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|472 SVEDEFELSTVCHRPEGLEQLQEQTKFTRKELQVLYRGFKNECPSGIVNEENFKQIYSQF
100 110 120 130 140 150
100 110 120 130 140 150
pF1KB8 FPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDDRLNWAFNLYDLNKDGC
:::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::
gi|472 FPQGDSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTIDDRLNWAFNLYDLNKDGC
160 170 180 190 200 210
160 170 180 190 200 210
pF1KB8 ITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTNEEFIESCQK
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::
gi|472 ITKEEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEFIESCQK
220 230 240 250 260 270
220
pF1KB8 DENIMRSMQLFDNVI
:::::::::::::::
gi|472 DENIMRSMQLFDNVI
280
>>gi|109090367|ref|XP_001111683.1| PREDICTED: Kv channel (225 aa)
initn: 1494 init1: 1494 opt: 1494 Z-score: 1861.0 bits: 351.6 E(25779625): 1.9e-94
Smith-Waterman score: 1494; 98.2% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|109 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::.:::::::::::::: ::::::::::::::::::::::::
gi|109 REHVENFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|335302149|ref|XP_003359394.1| PREDICTED: Kv channel (225 aa)
initn: 1493 init1: 1493 opt: 1493 Z-score: 1859.8 bits: 351.3 E(25779625): 2.3e-94
Smith-Waterman score: 1493; 98.2% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|335 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|335 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|335 VAGLSVILRGTTDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::::::::::::::::: ::::::::::::::::::::::::
gi|335 REHVESFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
>>gi|344274813|ref|XP_003409209.1| PREDICTED: Kv channel (225 aa)
initn: 1493 init1: 1493 opt: 1493 Z-score: 1859.8 bits: 351.3 E(25779625): 2.3e-94
Smith-Waterman score: 1493; 97.8% identity (99.1% similar) in 225 aa overlap (1-225:1-225)
10 20 30 40 50 60
pF1KB8 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVDDEFESSTVCHRPEGLEQLQEQTKFTRK
::::::::::::::::::::::::::::::::.:::: ::::::::::::::::::::::
gi|344 MNRCPRRCRSPLGQAARSLYQLVTGSLSPDSVEDEFELSTVCHRPEGLEQLQEQTKFTRK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB8 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 ELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSTYATFLFNAFDTNHDGSVSFEDF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB8 VAGLSVILRGTVDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|344 VAGLSVILRGTIDDRLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALREEAP
130 140 150 160 170 180
190 200 210 220
pF1KB8 REHVESFFQKMDRNKDGVVTNEEFIESCQKDENIMRSMQLFDNVI
:::::.:::::::::::::: ::::::::::::::::::::::::
gi|344 REHVENFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDNVI
190 200 210 220
225 residues in 1 query sequences
8900870272 residues in 25779625 library sequences
Tcomplib [36.3.4 Apr, 2011] (6 proc)
start: Sat May 25 17:39:21 2013 done: Sat May 25 17:40:44 2013
Total Scan time: 536.750 Total Display time: -1.050
Function used was FASTA [36.3.4 Apr, 2011]