Result of InterProScan for
pF1KB6253
hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /data/Pfam.bin
Sequence file: /tmp/20091008/iprscan-20091008-11204103/chunk_1/iprscan-20091008-11204103.nocrc
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Query sequence: pF1KB6253
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PF09316.1.ls C-myb, C-terminal 368.9 7.6e-108 1
PF09316.1.fs C-myb, C-terminal 366.9 2.9e-107 1
PF07988.2.ls Mitotic protein Wos2 229.3 8e-66 1
PF07988.2.fs Mitotic protein Wos2 227.3 3.1e-65 1
PF00249.21.ls Myb-like DNA-binding domain 185.4 1.3e-52 3
PF00249.21.fs Myb-like DNA-binding domain 180.3 4.3e-51 3
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PF00249.21.fs 1/3 40 86 .. 1 65 [] 64.8 1.1e-16
PF00249.21.ls 1/3 40 86 .. 1 65 [] 66.5 8.1e-17
PF00249.21.ls 2/3 92 138 .. 1 65 [] 58.7 1.8e-14
PF00249.21.fs 2/3 92 138 .. 1 65 [] 57.0 1.5e-14
PF00249.21.ls 3/3 144 189 .. 1 65 [] 60.3 5.9e-15
PF00249.21.fs 3/3 144 189 .. 1 65 [] 58.6 5.3e-15
PF07988.2.ls 1/1 223 313 .. 1 91 [] 229.3 8e-66
PF07988.2.fs 1/1 223 313 .. 1 91 [] 227.3 3.1e-65
PF09316.1.fs 1/1 402 580 .. 1 185 [] 366.9 2.9e-107
PF09316.1.ls 1/1 402 580 .. 1 185 [] 368.9 7.6e-108
Alignments of top-scoring domains:
PF00249.21.fs: domain 1 of 3, from 40 to 86: score 64.8, E = 1.1e-16
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+ rWt eEde+l+++ve++G++ +Wk Ia++l+
pF1KB6253 40 KTRWTREEDEKLKKLVEQNGTD----------DWKVIANYLP----- 71
nvlgrtaeqcklryykyk<-*
+rt+ qc++r++k++
pF1KB6253 72 ---NRTDVQCQHRWQKVL 86
PF00249.21.ls: domain 1 of 3, from 40 to 86: score 66.5, E = 8.1e-17
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+ rWt eEde+l+++ve++G++ +Wk Ia++l+
pF1KB6253 40 KTRWTREEDEKLKKLVEQNGTD----------DWKVIANYLP----- 71
nvlgrtaeqcklryykyk<-*
+rt+ qc++r++k++
pF1KB6253 72 ---NRTDVQCQHRWQKVL 86
PF00249.21.ls: domain 2 of 3, from 92 to 138: score 58.7, E = 1.8e-14
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+g+Wt+eEd++ +e+v+k+G + +W+ Ia++l
pF1KB6253 92 KGPWTKEEDQRVIELVQKYGPK----------RWSVIAKHLK----- 123
nvlgrtaeqcklryykyk<-*
gr ++qc++r+ +++
pF1KB6253 124 ---GRIGKQCRERWHNHL 138
PF00249.21.fs: domain 2 of 3, from 92 to 138: score 57.0, E = 1.5e-14
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+g+Wt+eEd++ +e+v+k+G + +W+ Ia++l
pF1KB6253 92 KGPWTKEEDQRVIELVQKYGPK----------RWSVIAKHLK----- 123
nvlgrtaeqcklryykyk<-*
gr ++qc++r+ +++
pF1KB6253 124 ---GRIGKQCRERWHNHL 138
PF00249.21.ls: domain 3 of 3, from 144 to 189: score 60.3, E = 5.9e-15
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+ +Wt+eEd ++++a++++G++ W++Ia++l+
pF1KB6253 144 KTSWTEEEDRIIYQAHKRLGNR-----------WAEIAKLLP----- 174
nvlgrtaeqcklryykyk<-*
grt++++k++++ ++
pF1KB6253 175 ---GRTDNAIKNHWNSTM 189
PF00249.21.fs: domain 3 of 3, from 144 to 189: score 58.6, E = 5.3e-15
*->rgrWtaeEdellveavekhGkgfgIrlsltkanWkkIaeklgpgssn
+ +Wt+eEd ++++a++++G++ W++Ia++l+
pF1KB6253 144 KTSWTEEEDRIIYQAHKRLGNR-----------WAEIAKLLP----- 174
nvlgrtaeqcklryykyk<-*
grt++++k++++ ++
pF1KB6253 175 ---GRTDNAIKNHWNSTM 189
PF07988.2.ls: domain 1 of 1, from 223 to 313: score 229.3, E = 8e-66
*->FaHasPasqLsgaGqaslnseYPYYHiAEaqnvssqvPYPvALHvni
Fa a+P +qL+ +Gq +n +Y YYHi Eaqnvss+vPYPvALHvni
pF1KB6253 223 FAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNI 269
vnvPqPAAAAiqRHYnDEDPEKEKRiKELELLLmstEnELKGqq<-*
vnvPqPAAAAiqRHYnDEDPEKEKRiKELELLLmstEnELKGqq
pF1KB6253 270 VNVPQPAAAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQ 313
PF07988.2.fs: domain 1 of 1, from 223 to 313: score 227.3, E = 3.1e-65
*->FaHasPasqLsgaGqaslnseYPYYHiAEaqnvssqvPYPvALHvni
Fa a+P +qL+ +Gq +n +Y YYHi Eaqnvss+vPYPvALHvni
pF1KB6253 223 FAQAPPTAQLPATGQPTVNNDYSYYHISEAQNVSSHVPYPVALHVNI 269
vnvPqPAAAAiqRHYnDEDPEKEKRiKELELLLmstEnELKGqq<-*
vnvPqPAAAAiqRHYnDEDPEKEKRiKELELLLmstEnELKGqq
pF1KB6253 270 VNVPQPAAAAIQRHYNDEDPEKEKRIKELELLLMSTENELKGQQ 313
PF09316.1.fs: domain 1 of 1, from 402 to 580: score 366.9, E = 2.9e-107
*->FSPsQFLNtstkqdsldLenpsLTSTPVCsQKlivTTpLhRDktpll
F LNts++++++dLe psLTSTP +++Kl+vTTp+hRD+t+++
pF1KB6253 402 F-----LNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKT 443
QKENslFrTPnIrRSildstPRTPTPFKnALAaQEeKYGPLkpLpqTP.h
QKEN +FrTP+I+RSil+s+PRTPTPFK+ALAaQE+KYGPLk+LpqTP+h
pF1KB6253 444 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPsH 493
LeeDikEVikqEtdEsgIeliivdekkpelkkikqevespteKkvrkSla
L+eD+++VikqE+dEsgI++++++ ++p+lkkikqevespt+K+++++++
pF1KB6253 494 LVEDLQDVIKQESDESGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCS 543
ldwededlntqlfrqpsavsdvpngqlltssllsipvsE<-*
+we+ +lntqlf+q s+v+d+pn +ltss+l+ p sE
pF1KB6253 544 HHWEGDSLNTQLFTQTSPVADAPN--ILTSSVLMAPASE 580
PF09316.1.ls: domain 1 of 1, from 402 to 580: score 368.9, E = 7.6e-108
*->FSPsQFLNtstkqdsldLenpsLTSTPVCsQKlivTTpLhRDktpll
F LNts++++++dLe psLTSTP +++Kl+vTTp+hRD+t+++
pF1KB6253 402 F-----LNTSSNHENSDLEMPSLTSTPLIGHKLTVTTPFHRDQTVKT 443
QKENslFrTPnIrRSildstPRTPTPFKnALAaQEeKYGPLkpLpqTP.h
QKEN +FrTP+I+RSil+s+PRTPTPFK+ALAaQE+KYGPLk+LpqTP+h
pF1KB6253 444 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEIKYGPLKMLPQTPsH 493
LeeDikEVikqEtdEsgIeliivdekkpelkkikqevespteKkvrkSla
L+eD+++VikqE+dEsgI++++++ ++p+lkkikqevespt+K+++++++
pF1KB6253 494 LVEDLQDVIKQESDESGIVAEFQENGPPLLKKIKQEVESPTDKSGNFFCS 543
ldwededlntqlfrqpsavsdvpngqlltssllsipvsE<-*
+we+ +lntqlf+q s+v+d+pn +ltss+l+ p sE
pF1KB6253 544 HHWEGDSLNTQLFTQTSPVADAPN--ILTSSVLMAPASE 580
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