hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20080305/iprscan-20080305-05350906/chunk_1/iprscan-20080305-05350906.nocrc
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Query sequence: pF1KB8302
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                         87.3    4.3e-23   3
PF00036.22.fs EF hand                                         81.3    2.8e-21   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/3      99   127 ..     1    29 []    23.7  2.1e-05
PF00036.22.ls   1/3      99   127 ..     1    29 []    25.7  0.00015
PF00036.22.fs   2/3     135   163 ..     1    29 []    33.8  3.7e-08
PF00036.22.ls   2/3     135   163 ..     1    29 []    35.7  1.4e-07
PF00036.22.fs   3/3     183   211 ..     1    29 []    23.9  1.9e-05
PF00036.22.ls   3/3     183   211 ..     1    29 []    25.9  0.00014

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 3, from 99 to 127: score 23.7, E = 2.1e-05
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       +  +F+ fD+++DG +sfe+f+a+l+ +   
   pF1KB8302    99    YATFLFNAFDTNHDGSVSFEDFVAGLSVI    127  

PF00036.22.ls: domain 1 of 3, from 99 to 127: score 25.7, E = 0.00015
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       +  +F+ fD+++DG +sfe+f+a+l+ +   
   pF1KB8302    99    YATFLFNAFDTNHDGSVSFEDFVAGLSVI    127  

PF00036.22.fs: domain 2 of 3, from 135 to 163: score 33.8, E = 3.7e-08
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +l+ aF+++D ++DG I++eE+++++k++   
   pF1KB8302   135    RLNWAFNLYDLNKDGCITKEEMLDIMKSI    163  

PF00036.22.ls: domain 2 of 3, from 135 to 163: score 35.7, E = 1.4e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      +l+ aF+++D ++DG I++eE+++++k++   
   pF1KB8302   135    RLNWAFNLYDLNKDGCITKEEMLDIMKSI    163  

PF00036.22.fs: domain 3 of 3, from 183 to 211: score 23.9, E = 1.9e-05
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       ++ +F+++D+++DG ++ eEf++ ++k    
   pF1KB8302   183    HVESFFQKMDRNKDGVVTNEEFIESCQKD    211  

PF00036.22.ls: domain 3 of 3, from 183 to 211: score 25.9, E = 0.00014
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                       ++ +F+++D+++DG ++ eEf++ ++k    
   pF1KB8302   183    HVESFFQKMDRNKDGVVTNEEFIESCQKD    211  

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