Result of InterProScan for
pF1KSDA0380
hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /data/Pfam.bin
Sequence file: /tmp/20080305/iprscan-20080305-12351635/chunk_1/iprscan-20080305-12351635.nocrc
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Query sequence: pF1KSDA0380
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PF09128.1.fs Regulator of G protein signalling-like domai 375.9 1.6e-123 1
PF09128.1.ls Regulator of G protein signalling-like domai 377.6 1.8e-110 1
PF00621.11.fs RhoGEF domain 96.8 2e-28 1
PF00621.11.ls RhoGEF domain 98.6 1.7e-26 1
PF00595.14.fs PDZ domain (Also known as DHR or GLGF) 57.4 1.8e-15 1
PF00595.14.ls PDZ domain (Also known as DHR or GLGF) 59.3 1.2e-14 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PF00595.14.fs 1/1 47 120 .. 1 86 [] 57.4 1.8e-15
PF00595.14.ls 1/1 47 120 .. 1 86 [] 59.3 1.2e-14
PF09128.1.fs 1/1 307 486 .. 1 239 [] 375.9 1.6e-123
PF09128.1.ls 1/1 307 486 .. 1 239 [] 377.6 1.8e-110
PF00621.11.fs 1/1 738 922 .. 1 207 [] 96.8 2e-28
PF00621.11.ls 1/1 738 922 .. 1 207 [] 98.6 1.7e-26
Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 1, from 47 to 120: score 57.4, E = 1.8e-15
*->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
v+++k ++g+Gf+++g + v +v pG gaA ++G
pF1KSDA038 47 CVIIQK--DQHGFGFTVSGDRI------VLVQSVRPG-GAAMKAG-V 83
qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
++GD+I++vNG+ ++n sh+e+v+++k+ v+Lt+l
pF1KSDA038 84 KEGDRIIKVNGTMVTNSSHLEVVKLIKSGA--YVALTLL 120
PF00595.14.ls: domain 1 of 1, from 47 to 120: score 59.3, E = 1.2e-14
*->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
v+++k ++g+Gf+++g + v +v pG gaA ++G
pF1KSDA038 47 CVIIQK--DQHGFGFTVSGDRI------VLVQSVRPG-GAAMKAG-V 83
qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
++GD+I++vNG+ ++n sh+e+v+++k+ v+Lt+l
pF1KSDA038 84 KEGDRIIKVNGTMVTNSSHLEVVKLIKSGA--YVALTLL 120
PF09128.1.fs: domain 1 of 1, from 307 to 486: score 375.9, E = 1.6e-123
*->qcspFqslelLLEKsRPAHLAVFLhhVlsQfDPspLLcYLiavDlYk
++++Fq+le+L KsRPAHL+VFL++++sQ+DPspLL+YL+a ++Y+
pF1KSDA038 307 SDIIFQDLEKL--KSRPAHLGVFLRYIFSQADPSPLLFYLCA-EVYQ 350
qAYgtsKEaRrlfmeihstFLdrnAppLkvpvpeeiaadlGataDGfdfL
q +++K++R+l+++i+++FL++nA pL+v++pe+++a++
pF1KSDA038 351 Q--ASPKDSRSLGKDIWNIFLEKNA-PLRVKIPEMLQAEI---------- 387
DeCqYYfqidkimcvdrrrpelipeeilRrvlqelqqralpeIqrqLeDe
+++l+++e++R+vl+e+q++a+peIq+q++D
pF1KSDA038 388 ------------------DSRLRNSEDARGVLCEAQEAAMPEIQEQIHD- 418
vhPPlvCvtWlFRqKRsmGLglaegeldlLdqeldgDrvtlErERqvaEq
+R+KR++GLg+++ge+dlLd ldgD++ rERqvaE+
pF1KSDA038 419 -----------YRTKRTLGLGSLYGENDLLD--LDGDPL---RERQVAEK 452
iLskleeiLDELstssttESCEeksstlqyailTYmkhlGVk<-*
+L++l++iL s++E E++s+++++a++TYm+h+G++
pF1KSDA038 453 QLAALGDIL------SKYE--EDRSAPMDFALNTYMSHAGIR 486
PF09128.1.ls: domain 1 of 1, from 307 to 486: score 377.6, E = 1.8e-110
*->qcspFqslelLLEKsRPAHLAVFLhhVlsQfDPspLLcYLiavDlYk
++++Fq+le+L KsRPAHL+VFL++++sQ+DPspLL+YL+a ++Y+
pF1KSDA038 307 SDIIFQDLEKL--KSRPAHLGVFLRYIFSQADPSPLLFYLCA-EVYQ 350
qAYgtsKEaRrlfmeihstFLdrnAppLkvpvpeeiaadlGataDGfdfL
q +++K++R+l+++i+++FL++nA pL+v++pe+++a++
pF1KSDA038 351 Q--ASPKDSRSLGKDIWNIFLEKNA-PLRVKIPEMLQAEI---------- 387
DeCqYYfqidkimcvdrrrpelipeeilRrvlqelqqralpeIqrqLeDe
+++l+++e++R+vl+e+q++a+peIq+q++D
pF1KSDA038 388 ------------------DSRLRNSEDARGVLCEAQEAAMPEIQEQIHD- 418
vhPPlvCvtWlFRqKRsmGLglaegeldlLdqeldgDrvtlErERqvaEq
+R+KR++GLg+++ge+dlLd ldgD++ rERqvaE+
pF1KSDA038 419 -----------YRTKRTLGLGSLYGENDLLD--LDGDPL---RERQVAEK 452
iLskleeiLDELstssttESCEeksstlqyailTYmkhlGVk<-*
+L++l++iL s++E E++s+++++a++TYm+h+G++
pF1KSDA038 453 QLAALGDIL------SKYE--EDRSAPMDFALNTYMSHAGIR 486
PF00621.11.fs: domain 1 of 1, from 738 to 922: score 96.8, E = 2e-28
*->vlkElleTEkkYvrdLeildnvymkpLreaaisskplLtpddietiF
v++El+ TE+ +r+L+ ld + +++++++ l +++++ +F
pF1KSDA038 738 VINELFVTEASHLRTLRVLDLIFYQRMKKEN-----LMPREELARLF 779
sNiediyefhreFLkssLearisssnfedlDekkiepsaqrlGdlFlelk
+N+++++e+h++ ++++ ++ p+ + dl l+++
pF1KSDA038 780 PNLPELIEIHNSWCE-AMKKLREEG-----------PIIKEISDLMLARF 817
.....aeflqvYgeYcsnkpyAqelleklrqaasnpqFaefldeveassn
+++ ++e qv + +cs++ A el+++ ++ F+ f +e e +++
pF1KSDA038 818 dgparEELQQVAAQFCSYQSIALELIKT--KQRKESRFQLFMQEAESHPQ 865
tgAkddavkltLqsLLlkPvqRilrYpLLLkeLLkhtpegedssesedLk
+ +l L++L++ +qR+++YpLLL ++kht + se+e L
pF1KSDA038 866 CR------RLQLRDLIISEMQRLTKYPLLLESIIKHTEG--GTSEHEKLC 907
kaldalqdlaksiNe<-*
a d+ ++++k++Ne
pF1KSDA038 908 RARDQCREILKYVNE 922
PF00621.11.ls: domain 1 of 1, from 738 to 922: score 98.6, E = 1.7e-26
*->vlkElleTEkkYvrdLeildnvymkpLreaaisskplLtpddietiF
v++El+ TE+ +r+L+ ld + +++++++ l +++++ +F
pF1KSDA038 738 VINELFVTEASHLRTLRVLDLIFYQRMKKEN-----LMPREELARLF 779
sNiediyefhreFLkssLearisssnfedlDekkiepsaqrlGdlFlelk
+N+++++e+h++ ++++ ++ p+ + dl l+++
pF1KSDA038 780 PNLPELIEIHNSWCE-AMKKLREEG-----------PIIKEISDLMLARF 817
.....aeflqvYgeYcsnkpyAqelleklrqaasnpqFaefldeveassn
+++ ++e qv + +cs++ A el+++ ++ F+ f +e e +++
pF1KSDA038 818 dgparEELQQVAAQFCSYQSIALELIKT--KQRKESRFQLFMQEAESHPQ 865
tgAkddavkltLqsLLlkPvqRilrYpLLLkeLLkhtpegedssesedLk
+ +l L++L++ +qR+++YpLLL ++kht + se+e L
pF1KSDA038 866 CR------RLQLRDLIISEMQRLTKYPLLLESIIKHTEG--GTSEHEKLC 907
kaldalqdlaksiNe<-*
a d+ ++++k++Ne
pF1KSDA038 908 RARDQCREILKYVNE 922
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