Result of InterProScan for
pF1KA1590
hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file: /data/Pfam.bin
Sequence file: /tmp/20080306/iprscan-20080306-10282865/chunk_1/iprscan-20080306-10282865.nocrc
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Query sequence: pF1KA1590
Accession: [none]
Description: [none]
Scores for sequence family classification (score includes all domains):
Model Description Score E-value N
-------- ----------- ----- ------- ---
PF00225.13.ls Kinesin motor domain 564.6 9.2e-167 1
PF00225.13.fs Kinesin motor domain 562.9 2.9e-166 1
PF00498.16.fs FHA domain 42.2 7.1e-12 1
PF00498.16.ls FHA domain 43.9 5e-10 1
Parsed for domains:
Model Domain seq-f seq-t hmm-f hmm-t score E-value
-------- ------- ----- ----- ----- ----- ----- -------
PF00225.13.fs 1/1 9 359 .. 1 424 [] 562.9 2.9e-166
PF00225.13.ls 1/1 9 359 .. 1 424 [] 564.6 9.2e-167
PF00498.16.fs 1/1 478 544 .. 1 94 [] 42.2 7.1e-12
PF00498.16.ls 1/1 478 544 .. 1 94 [] 43.9 5e-10
Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 9 to 359: score 562.9, E = 2.9e-166
*->RvRPlnerEksrgssdvvnv..........sedvessvitn.gkekt
RvRP+n rEk +++++++++++++ ++ + + ++ ++++kt
pF1KA1590 9 RVRPMNRREKDLEAKFIIQMekskttitnlKIPEGGTGDSGrERTKT 55
FtFDkVFdpeatQelse.p.YAsqefvyestakplvesvleGyNvtIFAY
Ft+D F +++t +p+Y sqe v+ +++ ++v+s++eGyN+++FAY
pF1KA1590 56 FTYDFSFYSADT----KsPdYVSQEMVFKTLGTDVVKSAFEGYNACVFAY 101
GQTGSGKTYTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerie
GQTGSGK+YTM+G++ ++ G+iPR++e lF+ri+
pF1KA1590 102 GQTGSGKSYTMMGNSG---------------DS--GLIPRICEGLFSRIN 134
erkerkpvfKPklnekgwellncqetligvsfdtrglsSdlyvedlefsv
e++ r w + +f+
pF1KA1590 135 ETT-R------------WD-------------------------EASFRT 146
kvSylEIYNEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkm
+vSylEIYNE++rDLL + ++k+ + Lr+re+pk+G
pF1KA1590 147 EVSYLEIYNERVRDLLRRK----------SSKTFN--LRVREHPKEG--- 181
dgvyVkGLteveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFti
+yV++L+ + V+++ +v el++ Gn nRt+a+T mN+ SSRSHaiFti
pF1KA1590 182 --PYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI 229
tveqrntdttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAg
+ +q d++++++t vsk++LVDLAGSERa+ Tgat g
pF1KA1590 230 KFTQAKFDSEMPCET-----------VSKIHLVDLAGSERADATGAT--G 266
grRLkEaanINkSLsaLGnVInALadnq..........kssHiPYRDSKL
r LkE++nINkSL +LGnVI+ALad +++ ++ ++k+ ++PYRDS+L
pF1KA1590 267 VR-LKEGGNINKSLVTLGNVISALADLSqdaantlakkKQVFVPYRDSVL 315
TrLLQDSLGGGDNsKTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk
T+LL+DSLGG NsKT+MIa+iSP++ ny ETLsTLr+A+RAKnI
pF1KA1590 316 TWLLKDSLGG--NSKTIMIATISPADV----NYGETLSTLRYANRAKNII 359
<-*
pF1KA1590 - -
PF00225.13.ls: domain 1 of 1, from 9 to 359: score 564.6, E = 9.2e-167
*->RvRPlnerEksrgssdvvnv..........sedvessvitn.gkekt
RvRP+n rEk +++++++++++++ ++ + + ++ ++++kt
pF1KA1590 9 RVRPMNRREKDLEAKFIIQMekskttitnlKIPEGGTGDSGrERTKT 55
FtFDkVFdpeatQelse.p.YAsqefvyestakplvesvleGyNvtIFAY
Ft+D F +++t +p+Y sqe v+ +++ ++v+s++eGyN+++FAY
pF1KA1590 56 FTYDFSFYSADT----KsPdYVSQEMVFKTLGTDVVKSAFEGYNACVFAY 101
GQTGSGKTYTMeGstdsdksspnpsdsCttpeeepGiiPRaledlFerie
GQTGSGK+YTM+G++ ++ G+iPR++e lF+ri+
pF1KA1590 102 GQTGSGKSYTMMGNSG---------------DS--GLIPRICEGLFSRIN 134
erkerkpvfKPklnekgwellncqetligvsfdtrglsSdlyvedlefsv
e++ r w + +f+
pF1KA1590 135 ETT-R------------WD-------------------------EASFRT 146
kvSylEIYNEkirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkm
+vSylEIYNE++rDLL + ++k+ + Lr+re+pk+G
pF1KA1590 147 EVSYLEIYNERVRDLLRRK----------SSKTFN--LRVREHPKEG--- 181
dgvyVkGLteveVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFti
+yV++L+ + V+++ +v el++ Gn nRt+a+T mN+ SSRSHaiFti
pF1KA1590 182 --PYVEDLSKHLVQNYGDVEELMDAGNINRTTAATGMNDVSSRSHAIFTI 229
tveqrntdttgsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAg
+ +q d++++++t vsk++LVDLAGSERa+ Tgat g
pF1KA1590 230 KFTQAKFDSEMPCET-----------VSKIHLVDLAGSERADATGAT--G 266
grRLkEaanINkSLsaLGnVInALadnq..........kssHiPYRDSKL
r LkE++nINkSL +LGnVI+ALad +++ ++ ++k+ ++PYRDS+L
pF1KA1590 267 VR-LKEGGNINKSLVTLGNVISALADLSqdaantlakkKQVFVPYRDSVL 315
TrLLQDSLGGGDNsKTlMIaniSPsssrNntnyeETLsTLrFAsRAKnIk
T+LL+DSLGG NsKT+MIa+iSP++ ny ETLsTLr+A+RAKnI
pF1KA1590 316 TWLLKDSLGG--NSKTIMIATISPADV----NYGETLSTLRYANRAKNII 359
<-*
pF1KA1590 - -
PF00498.16.fs: domain 1 of 1, from 478 to 544: score 42.2, E = 7.1e-12
*->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
+ +GR + +qdi+l+g + +H+ +e+ +g+v
pF1KA1590 478 TYVGR------DDASTEQDIVLHGlDLESEHCIFENIGGTV------ 512
rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
+l++ls++ ++vNg+++ e + L++G+vi+lG
pF1KA1590 513 ----------TLIPLSGSQ----CSVNGVQI--VEATHLNQGAVILLG 544
*
pF1KA1590 - -
PF00498.16.ls: domain 1 of 1, from 478 to 544: score 43.9, E = 5e-10
*->vtiGRdsdsddilldddqdiqldg.siSrrHaeieykdggvglelaf
+ +GR + +qdi+l+g + +H+ +e+ +g+v
pF1KA1590 478 TYVGR------DDASTEQDIVLHGlDLESEHCIFENIGGTV------ 512
rpaqvkefgvylrDlssknlnGatfvNgkrlgngepvrLksGdvirlG<-
+l++ls++ ++vNg+++ e + L++G+vi+lG
pF1KA1590 513 ----------TLIPLSGSQ----CSVNGVQI--VEATHLNQGAVILLG 544
*
pF1KA1590 - -
//