ZIM3 ORF clone FHC28677

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC28677

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Clone info.

Species

human

Clone Name

pFN21AE5643 Sequence (with vector) Restriction Map

Product ID

FHC28677

ORF Sequence

DNA sequence (1416 bp)
Protein sequence (472 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIEE5643

Symbol

ZIM3

Alias : ZNF264, ZNF657

Description

zinc finger, imprinted 3

Original Clone ID

oc95643

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1416 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 472 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS33125.1 1.9e-108 100.0 ZIM3 CCDS14278.1 2e-43 42.2 ZNF157 CCDS12501.1 2.4e-43 44.0 ZNF383 CCDS77346.1 8.5e-42 42.7 ZNF480 CCDS77297.1 2.2e-40 40.9 ZNF546 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001909 8 48 PF01352 Krueppel-associated box IPR007087 223 245 PF00096 Zinc finger IPR007087 279 301 PF00096 Zinc finger IPR007087 307 329 PF00096 Zinc finger IPR007087 391 413 PF00096 Zinc finger IPR007087 447 470 PF00096 Zinc finger HMMSmart IPR001909 8 69 SM00349 Krueppel-associated box IPR015880 167 189 SM00355 Zinc finger IPR015880 195 217 SM00355 Zinc finger IPR015880 223 245 SM00355 Zinc finger IPR015880 251 273 SM00355 Zinc finger IPR015880 279 301 SM00355 Zinc finger IPR015880 307 329 SM00355 Zinc finger IPR015880 335 357 SM00355 Zinc finger IPR015880 363 385 SM00355 Zinc finger IPR015880 391 413 SM00355 Zinc finger IPR015880 419 441 SM00355 Zinc finger IPR015880 447 470 SM00355 Zinc finger ProfileScan IPR001909 8 80 PS50805 Krueppel-associated box IPR007087 167 194 PS50157 Zinc finger IPR007087 195 222 PS50157 Zinc finger IPR007087 223 250 PS50157 Zinc finger IPR007087 251 278 PS50157 Zinc finger IPR007087 279 306 PS50157 Zinc finger IPR007087 307 334 PS50157 Zinc finger IPR007087 335 362 PS50157 Zinc finger IPR007087 363 390 PS50157 Zinc finger IPR007087 391 418 PS50157 Zinc finger IPR007087 419 446 PS50157 Zinc finger IPR007087 447 472 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003437 506 300024 42.2 98.7 NP_001284553 492 613910 42.7 99.6 NP_001070663 470 611703 40.8 99.8 NP_085137 470 611703 40.8 99.8 XP_016881886 509 606427 40.0 99.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AE5643 Download

>KIEE5643  1416 bp
ATGAACAATTCCCAGGGAAGAGTGACCTTCGAGGATGTCACTGTGAACTTCACCCAGGGG
GAGTGGCAGCGGCTGAATCCCGAACAGAGAAACTTGTACAGGGATGTGATGCTGGAGAAT
TACAGCAACCTTGTCTCTGTGGGACAAGGGGAAACCACCAAACCCGATGTGATCTTGAGG
TTGGAACAAGGAAAGGAGCCATGGTTGGAGGAAGAGGAAGTGCTGGGAAGTGGCCGTGCA
GAAAAAAATGGGGACATTGGAGGGCAGATTTGGAAGCCAAAGGATGTGAAAGAGAGTCTC
GCAAGAGAAGTCCCATCAATCAATAAGGAAACGCTGACTACGCAGAAAGGTGTAGAATGT
GACGGATCTAAGAAAATACTTCCACTGGGCATAGATGATGTATCTTCCTTGCAACACTAT
GTACAAAATAATTCTCACGATGATAATGGATACAGAAAATTAGTTGGCAATAATCCATCC
AAATTTGTAGGACAACAACTGAAATGTAATGCCTGTAGAAAGTTATTCAGTTCAAAGTCA
CGCCTTCAAAGTCACCTGAGGAGGCATGCCTGTCAAAAACCCTTTGAATGTCATAGCTGT
GGAAGAGCATTCGGGGAGAAGTGGAAGCTTGATAAACATCAGAAAACTCACGCAGAGGAA
AGGCCCTATAAATGTGAGAACTGTGGAAATGCCTACAAGCAGAAGTCAAATCTCTTTCAA
CATCAGAAAATGCATACTAAAGAGAAACCCTATCAGTGTAAGACATGTGGAAAAGCCTTT
TCCTGGAAATCATCCTGCATTAATCATGAGAAAATTCATAATGCCAAGAAATCCTATCAG
TGTAATGAATGTGAGAAATCCTTCAGGCAGAACTCAACCCTCATTCAACATAAAAAAGTT
CACACTGGACAAAAACCCTTTCAATGTACGGACTGTGGAAAGGCTTTCATTTACAAGTCA
GATCTTGTGAAACACCAGAGAATACACACGGGAGAGAAACCCTATAAATGTAGCATATGT
GAGAAGGCCTTTTCCCAGAAATCCAATGTCATCGATCATGAGAAAATTCACACTGGGAAG
AGAGCTTATGAGTGTGATCTATGTGGAAATACCTTTATCCAGAAGAAAAACCTCATTCAA
CATAAAAAAATCCATACTGGGGAAAAGCCCTATGAATGTAACAGATGTGGAAAAGCCTTC
TTTCAGAAGTCAAACCTTCATAGCCATCAGAAAACTCATAGCGGAGAGAGGACCTATAGA
TGTAGTGAATGTGGAAAAACCTTCATCCGGAAATTAAACCTTAGTTTGCATAAAAAAACC
CATACTGGACAAAAACCTTATGGATGTTCTGAATGCGGTAAAGCCTTCGCTGACAGGTCA
TACCTTGTTAGGCACCAGAAAAGAATTCACTCCAGA

ORF Protein

Cloned ORF protein sequence for pFN21AE5643 Download

>KIEE5643  472 aa
MNNSQGRVTFEDVTVNFTQGEWQRLNPEQRNLYRDVMLENYSNLVSVGQGETTKPDVILR
LEQGKEPWLEEEEVLGSGRAEKNGDIGGQIWKPKDVKESLAREVPSINKETLTTQKGVEC
DGSKKILPLGIDDVSSLQHYVQNNSHDDNGYRKLVGNNPSKFVGQQLKCNACRKLFSSKS
RLQSHLRRHACQKPFECHSCGRAFGEKWKLDKHQKTHAEERPYKCENCGNAYKQKSNLFQ
HQKMHTKEKPYQCKTCGKAFSWKSSCINHEKIHNAKKSYQCNECEKSFRQNSTLIQHKKV
HTGQKPFQCTDCGKAFIYKSDLVKHQRIHTGEKPYKCSICEKAFSQKSNVIDHEKIHTGK
RAYECDLCGNTFIQKKNLIQHKKIHTGEKPYECNRCGKAFFQKSNLHSHQKTHSGERTYR
CSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRSYLVRHQKRIHSR

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AE5643 Download

>pFN21AE5643  6121 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGAACAATTCCCAGGGAAGAGTGACCTTCGAGGA
TGTCACTGTGAACTTCACCCAGGGGGAGTGGCAGCGGCTGAATCCCGAACAGAGAAACTT
GTACAGGGATGTGATGCTGGAGAATTACAGCAACCTTGTCTCTGTGGGACAAGGGGAAAC
CACCAAACCCGATGTGATCTTGAGGTTGGAACAAGGAAAGGAGCCATGGTTGGAGGAAGA
GGAAGTGCTGGGAAGTGGCCGTGCAGAAAAAAATGGGGACATTGGAGGGCAGATTTGGAA
GCCAAAGGATGTGAAAGAGAGTCTCGCAAGAGAAGTCCCATCAATCAATAAGGAAACGCT
GACTACGCAGAAAGGTGTAGAATGTGACGGATCTAAGAAAATACTTCCACTGGGCATAGA
TGATGTATCTTCCTTGCAACACTATGTACAAAATAATTCTCACGATGATAATGGATACAG
AAAATTAGTTGGCAATAATCCATCCAAATTTGTAGGACAACAACTGAAATGTAATGCCTG
TAGAAAGTTATTCAGTTCAAAGTCACGCCTTCAAAGTCACCTGAGGAGGCATGCCTGTCA
AAAACCCTTTGAATGTCATAGCTGTGGAAGAGCATTCGGGGAGAAGTGGAAGCTTGATAA
ACATCAGAAAACTCACGCAGAGGAAAGGCCCTATAAATGTGAGAACTGTGGAAATGCCTA
CAAGCAGAAGTCAAATCTCTTTCAACATCAGAAAATGCATACTAAAGAGAAACCCTATCA
GTGTAAGACATGTGGAAAAGCCTTTTCCTGGAAATCATCCTGCATTAATCATGAGAAAAT
TCATAATGCCAAGAAATCCTATCAGTGTAATGAATGTGAGAAATCCTTCAGGCAGAACTC
AACCCTCATTCAACATAAAAAAGTTCACACTGGACAAAAACCCTTTCAATGTACGGACTG
TGGAAAGGCTTTCATTTACAAGTCAGATCTTGTGAAACACCAGAGAATACACACGGGAGA
GAAACCCTATAAATGTAGCATATGTGAGAAGGCCTTTTCCCAGAAATCCAATGTCATCGA
TCATGAGAAAATTCACACTGGGAAGAGAGCTTATGAGTGTGATCTATGTGGAAATACCTT
TATCCAGAAGAAAAACCTCATTCAACATAAAAAAATCCATACTGGGGAAAAGCCCTATGA
ATGTAACAGATGTGGAAAAGCCTTCTTTCAGAAGTCAAACCTTCATAGCCATCAGAAAAC
TCATAGCGGAGAGAGGACCTATAGATGTAGTGAATGTGGAAAAACCTTCATCCGGAAATT
AAACCTTAGTTTGCATAAAAAAACCCATACTGGACAAAAACCTTATGGATGTTCTGAATG
CGGTAAAGCCTTCGCTGACAGGTCATACCTTGTTAGGCACCAGAAAAGAATTCACTCCAG
AGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGC
AAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTG
AGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATT
GATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATT
TGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAAC
AATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAG
TAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTT
TCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGA
CTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGC
GGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAA
TAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTC
CGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAA
ACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAA
CTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATG
ATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAA
GAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTC
ACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACC
ATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTA
ACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAG
CTGAATGAAGCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACA
ACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATA
GACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGC
TGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCA
CTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCA
ACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGG
TAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAA
TACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGC
AAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCC
CTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTAT
AAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGC
CGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCT
CACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACG
AACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACC
CGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGA
GGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAA
GGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTA
GCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGC
AGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTG
ACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGA
TCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCG
CTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGC
CTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGC
AGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGC
GTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTA
GCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATC
T