TRIM13 ORF clone FHC11734

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC11734

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Clone info.

Species

human

Clone Name

pFN21AB9643 Sequence (with vector) Restriction Map

Product ID

FHC11734

Flexi Clone PID

FXC11734

ORF Sequence

DNA sequence (1221 bp)
Protein sequence (407 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529314]

Gene

KIBB9643

Symbol

TRIM13

Alias : CAR, DLEU5, LEU5, RFP2, RNF77

Description

tripartite motif containing 13, transcript variant 1

Original Clone ID

cp00226

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1221 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 407 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9423.1 1.8e-125 100.0 TRIM13 CCDS41888.1 1.8e-125 100.0 TRIM13 CCDS3190.1 6.2e-29 34.3 TRIM59 CCDS31356.1 2.1e-11 26.5 TRIM68 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018957 10 57 PF00097 Zinc finger IPR000315 90 131 PF00643 Zinc finger HMMSmart IPR001841 10 57 SM00184 Zinc finger IPR000315 89 131 SM00336 Zinc finger ProfileScan IPR001841 10 58 PS50089 Zinc finger IPR000315 89 131 PS50119 Zinc finger
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 310 IPWSFYKLFLLILLLGLVIVFGP 332 PRIMARY 23 2 377 DGFFIFNERFKNFTLVVLNNVAE 399 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_998755 407 605661 100.0 100.0 NP_434698 407 605661 100.0 100.0 NP_005789 407 605661 100.0 100.0 NP_001007279 410 605661 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB9643 Download

>KIBB9643  1221 bp
ATGGAGCTGCTTGAAGAAGATCTCACATGCCCTATTTGTTGTAGTCTGTTTGATGATCCA
CGGGTTTTGCCTTGCTCCCACAACTTCTGCAAAAAATGCTTAGAAGGTATCTTAGAAGGG
AGTGTGCGGAATTCCTTGTGGAGACCAGCTCCATTCAAGTGTCCTACATGCCGTAAGGAA
ACTTCAGCTACTGGAATTAATAGCCTGCAGGTTAATTACTCCCTGAAGGGTATTGTGGAA
AAGTATAACAAGATCAAGATCTCTCCCAAAATGCCAGTATGCAAAGGACACTTGGGGCAG
CCTCTCAACATTTTCTGCCTGACTGATATGCAGCTGATTTGTGGGATCTGTGCTACTCGT
GGGGAGCACACCAAACATGTCTTCTGTTCTATTGAAGATGCCTATGCTCAGGAAAGGGAT
GCCTTTGAGTCCCTCTTCCAGAGCTTTGAGACCTGGCGTCGGGGAGATGCTCTTTCTCGC
TTGGATACCTTGGAAACTAGTAAGAGGAAATCCCTACAGTTACTGACTAAAGATTCAGAT
AAAGTGAAGGAATTTTTTGAGAAGTTACAACACACACTGGATCAAAAGAAGAATGAAATT
CTGTCTGACTTTGAGACCATGAAACTTGCTGTTATGCAAGCATATGACCCAGAGATCAAC
AAACTCAACACCATCTTGCAGGAGCAACGGATGGCCTTTAACATTGCTGAGGCTTTCAAA
GATGTGTCAGAACCCATTGTATTTCTGCAACAGATGCAGGAGTTTAGAGAGAAAATCAAA
GTAATCAAGGAAACTCCTTTACCTCCCTCTAATTTGCCTGCAAGCCCTTTAATGAAGAAC
TTTGATACCAGTCAGTGGGAAGACATAAAACTAGTCGATGTGGATAAACTTTCTTTGCCT
CAAGACACTGGCACATTCATTAGCAAGATTCCCTGGAGCTTTTATAAGTTATTTTTGCTA
ATCCTTCTGCTTGGCCTTGTCATTGTCTTTGGTCCTACCATGTTCCTAGAATGGTCATTA
TTTGATGACCTGGCAACTTGGAAAGGCTGTCTTTCAAACTTCAGTTCCTATCTGACTAAA
ACAGCCGATTTCATAGAACAATCAGTTTTTTACTGGGAACAGGTGACAGATGGGTTTTTC
ATTTTCAATGAAAGATTCAAGAATTTTACTTTGGTGGTACTGAACAATGTGGCAGAATTT
GTGTGCAAATATAAACTATTA

ORF Protein

Cloned ORF protein sequence for pFN21AB9643 Download

>KIBB9643  407 aa
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGILEGSVRNSLWRPAPFKCPTCRKE
TSATGINSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATR
GEHTKHVFCSIEDAYAQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSD
KVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAEAFK
DVSEPIVFLQQMQEFREKIKVIKETPLPPSNLPASPLMKNFDTSQWEDIKLVDVDKLSLP
QDTGTFISKIPWSFYKLFLLILLLGLVIVFGPTMFLEWSLFDDLATWKGCLSNFSSYLTK
TADFIEQSVFYWEQVTDGFFIFNERFKNFTLVVLNNVAEFVCKYKLL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB9643 Download

>pFN21AB9643  5926 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGAGCTGCTTGAAGAAGATCTCACATGCCCTAT
TTGTTGTAGTCTGTTTGATGATCCACGGGTTTTGCCTTGCTCCCACAACTTCTGCAAAAA
ATGCTTAGAAGGTATCTTAGAAGGGAGTGTGCGGAATTCCTTGTGGAGACCAGCTCCATT
CAAGTGTCCTACATGCCGTAAGGAAACTTCAGCTACTGGAATTAATAGCCTGCAGGTTAA
TTACTCCCTGAAGGGTATTGTGGAAAAGTATAACAAGATCAAGATCTCTCCCAAAATGCC
AGTATGCAAAGGACACTTGGGGCAGCCTCTCAACATTTTCTGCCTGACTGATATGCAGCT
GATTTGTGGGATCTGTGCTACTCGTGGGGAGCACACCAAACATGTCTTCTGTTCTATTGA
AGATGCCTATGCTCAGGAAAGGGATGCCTTTGAGTCCCTCTTCCAGAGCTTTGAGACCTG
GCGTCGGGGAGATGCTCTTTCTCGCTTGGATACCTTGGAAACTAGTAAGAGGAAATCCCT
ACAGTTACTGACTAAAGATTCAGATAAAGTGAAGGAATTTTTTGAGAAGTTACAACACAC
ACTGGATCAAAAGAAGAATGAAATTCTGTCTGACTTTGAGACCATGAAACTTGCTGTTAT
GCAAGCATATGACCCAGAGATCAACAAACTCAACACCATCTTGCAGGAGCAACGGATGGC
CTTTAACATTGCTGAGGCTTTCAAAGATGTGTCAGAACCCATTGTATTTCTGCAACAGAT
GCAGGAGTTTAGAGAGAAAATCAAAGTAATCAAGGAAACTCCTTTACCTCCCTCTAATTT
GCCTGCAAGCCCTTTAATGAAGAACTTTGATACCAGTCAGTGGGAAGACATAAAACTAGT
CGATGTGGATAAACTTTCTTTGCCTCAAGACACTGGCACATTCATTAGCAAGATTCCCTG
GAGCTTTTATAAGTTATTTTTGCTAATCCTTCTGCTTGGCCTTGTCATTGTCTTTGGTCC
TACCATGTTCCTAGAATGGTCATTATTTGATGACCTGGCAACTTGGAAAGGCTGTCTTTC
AAACTTCAGTTCCTATCTGACTAAAACAGCCGATTTCATAGAACAATCAGTTTTTTACTG
GGAACAGGTGACAGATGGGTTTTTCATTTTCAATGAAAGATTCAAGAATTTTACTTTGGT
GGTACTGAACAATGTGGCAGAATTTGTGTGCAAATATAAACTATTAGTTTAAACGAATTC
GGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTG
CTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCAT
AACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAA
ACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCT
TTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTT
ATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAA
TGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATA
GCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTA
ATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATG
CTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATT
CCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTA
AAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGC
GGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAA
GTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGC
CGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTT
ACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACT
GCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCAC
AACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATA
CCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTA
TTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG
GATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGAT
AAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGT
AAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGA
AATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACC
GACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAG
AATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACC
GTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACA
AAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGT
TTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACC
TGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATC
TCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGC
CCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACT
TATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTG
CTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTA
TCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCA
AACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAA
AAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACG
AAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCC
TTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAAC
CATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTT
GCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGT
TTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGT
ACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAAC
CGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT