ZNF398 ORF clone FHC10443

KOP
KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC10443

How to Order Order Information

Clone info.

Species

human

Clone Name

pFN21AA1339 Sequence (with vector) Restriction Map

Product ID

FHC10443

Flexi Clone PID

FXC10443

Original Clone PID

ORK10443

ORF Sequence

DNA sequence (1926 bp)
Protein sequence (642 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527270]

Gene

KIAA1339

Symbol

ZNF398

Alias : P51, P71, ZER6

Description

zinc finger protein 398, transcript variant 1

Original Clone ID

fj00071s1

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1926 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 642 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5894.1 2.4e-149 100.0 ZNF398 CCDS47739.1 1.8e-110 100.0 ZNF398 CCDS5895.1 5.3e-46 43.4 ZNF282 CCDS55282.1 6.4e-30 34.2 ZNF250 CCDS34972.1 1e-29 33.7 ZNF250 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022137 37 115 PF12417 Protein of unknown function DUF3669 IPR001909 143 183 PF01352 Krueppel-associated box IPR007087 427 449 PF00096 Zinc finger IPR007087 511 533 PF00096 Zinc finger IPR007087 539 561 PF00096 Zinc finger IPR007087 567 590 PF00096 Zinc finger HMMSmart IPR001909 143 203 SM00349 Krueppel-associated box IPR015880 343 364 SM00355 Zinc finger IPR015880 398 420 SM00355 Zinc finger IPR015880 427 449 SM00355 Zinc finger IPR015880 455 477 SM00355 Zinc finger IPR015880 483 505 SM00355 Zinc finger IPR015880 511 533 SM00355 Zinc finger IPR015880 539 561 SM00355 Zinc finger IPR015880 567 590 SM00355 Zinc finger ProfileScan IPR001909 143 214 PS50805 Krueppel-associated box IPR007087 370 397 PS50157 Zinc finger IPR007087 398 425 PS50157 Zinc finger IPR007087 427 454 PS50157 Zinc finger IPR007087 455 482 PS50157 Zinc finger IPR007087 483 510 PS50157 Zinc finger IPR007087 511 538 PS50157 Zinc finger IPR007087 539 566 PS50157 Zinc finger IPR007087 567 592 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003566 671 603397 43.4 94.5 NP_036388 495 602386 39.2 88.0 XP_016868136 492 602386 39.3 85.4 XP_005250112 535 602386 39.3 85.4 XP_016868135 494 602386 39.2 88.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA1339 Download

>KIAA1339  1926 bp
ATGGCTGAGGCGGCCCCGGCCCCGACATCTGAATGGGACTCCGAGTGCCTTACATCCCTG
CAGCCCCTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCACACCTGCAGACAGCAGCT
ATCTCTCTGTGGACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAAGGTGGAGATCCAC
AGCCGGCGACTCCTACACCTGGAAGGTCGGACAGGGACAGCAGAGAAGAAACTAGCCAGC
TGTGAAAAGACAGTTACCGAGCTTGGGAACCAGCTGGAGGGCAAGTGGGCCGTGCTGGGA
ACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACTTGGAGAACCTGCTG
CGCAACAGGAACTTCTGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGATATCCCAAAG
GTGCCTGTGGCATTTGATGATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAAAATTA
GAAGAATGGCAAAAGGAACTTTACAAGAATATCATGAAGGGCAACTACGAGTCTCTCATC
TCCATGGATTATGCTATAAATCAACCTGATGTCTTATCTCAGATTCAACCAGAAGGGGAA
CATAATACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAA
GAGCCTGGTATTTCAACATCAGATATTCTGTCTTGGATTAAACAAGAAGAAGAGCCTCAG
GTTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTACAAAAGCACTTATGCTGATGAA
GAGCTTGTCATCAAAGCTGAAGGCCTTGCTAGATCCTCGTTGTGCCCTGAGGTTCCAGTC
CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAGATGTGGCTTTCAAAAGC
CAGCAGTCTACATCCATGACACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAGCCTCT
GAGGGACAAGTGACTTTTACTCAGTTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAG
CAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCAC
CAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTACT
CCACAGGCGGACCTCAGCAGCACCTCCCAGGACCATGCCAGCGAGACACCCCCCACCTGC
CCACACTGTGCCAGGACTTTTACTCACCCATCAAGACTTACCTACCATCTTCGGGTCCAT
AACAGCACTGAGCGTCCTTTCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACCAGGCT
CGACTCACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCCGCTGTGCCCAGTGC
GGCAGGAGCTTCAGCTTGAAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAG
CGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCCTGATCCGC
CACCAGATGATCCACACAGGCGAGCGTCCTTACCCCTGCACTGACTGCAGTAAGAGCTTC
ATGCGCAAGGAGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGGCCCTTCAGT
TGTCCTCACTGTGGCAAGAGCTTCATCCGCAAGCACCACCTAATGAAACACCAGCGCATC
CACACCGGGGAGCGGCCCTACCCCTGCTCCTACTGTGGCAGGAGCTTCCGCTACAAACAG
ACACTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCA
TCAGGTCAGCCACCCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAACTTCTGGCCTG
GGTGTCAACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGGGAGTGGAGGGGGA
GTTTTG

ORF Protein

Cloned ORF protein sequence for pFN21AA1339 Download

>KIAA1339  642 aa
MAEAAPAPTSEWDSECLTSLQPLPLPTPPAANEAHLQTAAISLWTVVAAVQAIERKVEIH
SRRLLHLEGRTGTAEKKLASCEKTVTELGNQLEGKWAVLGTLLQEYGLLQRRLENLENLL
RNRNFWILRLPPGIKGDIPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLI
SMDYAINQPDVLSQIQPEGEHNTEDQAGPEESEIPTDPSEEPGISTSDILSWIKQEEEPQ
VGAPPESKESDVYKSTYADEELVIKAEGLARSSLCPEVPVPFSSPPAAAKDAFSDVAFKS
QQSTSMTPFGRPATDLPEASEGQVTFTQLGSYPLPPPVGEQVFSCHHCGKNLSQDMLLTH
QCSHATEHPLPCAQCPKHFTPQADLSSTSQDHASETPPTCPHCARTFTHPSRLTYHLRVH
NSTERPFPCPDCPKRFADQARLTSHRRAHASERPFRCAQCGRSFSLKISLLLHQRGHAQE
RPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFS
CPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDP
SGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA1339 Download

>pFN21AA1339  6631 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGGCTGAGGCGGCCCCGGCCCCGACATCTGAATG
GGACTCCGAGTGCCTTACATCCCTGCAGCCCCTTCCTCTTCCTACACCCCCAGCAGCAAA
TGAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGGACAGTGGTGGCCGCCGTGCAGGC
TATAGAGAGGAAGGTGGAGATCCACAGCCGGCGACTCCTACACCTGGAAGGTCGGACAGG
GACAGCAGAGAAGAAACTAGCCAGCTGTGAAAAGACAGTTACCGAGCTTGGGAACCAGCT
GGAGGGCAAGTGGGCCGTGCTGGGAACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCG
GCTGGAGAACTTGGAGAACCTGCTGCGCAACAGGAACTTCTGGATCCTGCGGCTCCCTCC
AGGTATTAAGGGAGATATCCCAAAGGTGCCTGTGGCATTTGATGATGTCTCCATCTACTT
TTCCACTCCAGAGTGGGAAAAATTAGAAGAATGGCAAAAGGAACTTTACAAGAATATCAT
GAAGGGCAACTACGAGTCTCTCATCTCCATGGATTATGCTATAAATCAACCTGATGTCTT
ATCTCAGATTCAACCAGAAGGGGAACATAATACAGAGGACCAGGCAGGGCCAGAGGAAAG
TGAGATTCCCACAGACCCCAGTGAAGAGCCTGGTATTTCAACATCAGATATTCTGTCTTG
GATTAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGT
GTACAAAAGCACTTATGCTGATGAAGAGCTTGTCATCAAAGCTGAAGGCCTTGCTAGATC
CTCGTTGTGCCCTGAGGTTCCAGTCCCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGC
TTTTTCAGATGTGGCTTTCAAAAGCCAGCAGTCTACATCCATGACACCTTTTGGACGTCC
AGCCACTGACCTGCCTGAAGCCTCTGAGGGACAAGTGACTTTTACTCAGTTGGGTAGCTA
TCCCCTCCCACCTCCAGTTGGCGAGCAGGTGTTCTCATGCCACCACTGTGGCAAGAATCT
CAGCCAAGACATGTTGCTGACCCACCAATGTAGCCATGCTACTGAGCACCCCTTACCCTG
TGCCCAGTGCCCTAAGCACTTTACTCCACAGGCGGACCTCAGCAGCACCTCCCAGGACCA
TGCCAGCGAGACACCCCCCACCTGCCCACACTGTGCCAGGACTTTTACTCACCCATCAAG
ACTTACCTACCATCTTCGGGTCCATAACAGCACTGAGCGTCCTTTCCCCTGTCCTGATTG
CCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAGCCACCGGAGAGCTCATGCAAGCGA
AAGGCCCTTCCGCTGTGCCCAGTGCGGCAGGAGCTTCAGCTTGAAAATCAGCCTCCTGCT
CCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTT
CAACGGCCACTCGGCCCTGATCCGCCACCAGATGATCCACACAGGCGAGCGTCCTTACCC
CTGCACTGACTGCAGTAAGAGCTTCATGCGCAAGGAGCACCTGCTGAACCACCGGCGGCT
GCACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGTGGCAAGAGCTTCATCCGCAAGCA
CCACCTAATGAAACACCAGCGCATCCACACCGGGGAGCGGCCCTACCCCTGCTCCTACTG
TGGCAGGAGCTTCCGCTACAAACAGACACTCAAGGACCACCTCCGTTCAGGCCACAATGG
AGGCTGTGGGGGTGATAGTGACCCATCAGGTCAGCCACCCAACCCACCAGGTCCCCTCAT
AACTGGGCTTGAAACTTCTGGCCTGGGTGTCAACACTGAAGGTCTAGAGACCAACCAGTG
GTATGGGGAAGGGAGTGGAGGGGGAGTTTTGGTTTAAACGAATTCGGGCTCGGTACCCGG
GGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAA
AGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGG
CCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATG
CAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATT
ATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAG
GGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAA
TTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACA
TTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACG
TCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGA
AAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCA
TTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGAT
CAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAG
AGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGC
GCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCT
CAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACA
GTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTT
CTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCAT
GTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGT
GACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTA
CTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGA
CCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGT
GAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATC
GTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCT
GAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCC
AACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACG
CAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGT
TGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAA
GTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCT
CCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCC
CTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGG
TCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCT
TATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAG
CAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGA
AGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGA
AGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTG
GTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAG
AAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG
GGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAA
ATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAG
CTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATA
CGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTA
CCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTA
TGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCC
ACGATGCGTCCGGCGTAGAGGATCGAGATCT