IRX3 ORF clone FHC09128

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC09128

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Clone info.

Species

human

Clone Name

pFN21AB7764 Sequence (with vector) Restriction Map

Product ID

FHC09128

ORF Sequence

DNA sequence (1503 bp)
Protein sequence (501 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

Gene

KIBB7764

Symbol

IRX3

Alias : IRX-1, IRXB1

Description

iroquois homeobox 3

Original Clone ID

cs00264

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1503 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 501 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10750.1 5.9e-81 99.8 IRX3 CCDS34132.1 5.1e-19 44.8 IRX1 CCDS10751.1 2.4e-15 38.3 IRX5 CCDS58462.1 2.7e-15 38.1 IRX5 CCDS3868.1 1.4e-13 38.2 IRX2 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 146 187 PF00046 Homeobox HMMSmart IPR001356 128 192 SM00389 Homeobox IPR003893 342 359 SM00548 Iroquois-class homeodomain protein ProfileScan IPR001356 135 188 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_077312 501 612985 99.8 100.0 XP_005256196 529 612985 99.6 97.0 XP_016865334 449 606197 47.3 91.2 NP_077313 480 606197 44.8 100.0 NP_005844 483 606195,611174 38.3 95.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7764 Download

>KIBB7764  1503 bp
ATGTCCTTCCCCCAGCTGGGATACCAATACATCCGCCCGCTTTACCCGTCCGAGCGCCCG
GGGGCCGCTGGCGGCAGCGGCGGCAGCGCGGGGGCCCGGGGCGGCCTGGGTGCCGGAGCC
TCGGAGCTGAACGCCTCGGGGTCCCTGTCCAACGTGCTCTCGTCCGTGTACGGGGCGCCC
TACGCCGCGGCCGCTGCGGCCGCCGCCGCCCAAGGCTACGGCGCCTTCCTGCCCTACGCC
GCGGAGCTGCCCATCTTCCCGCAGCTGGGCGCGCAGTATGAGCTGAAGGACAGCCCCGGG
GTGCAGCATCCGGCCGCGGCTGCCGCGTTTCCGCACCCGCACCCCGCCTTCTACCCGTAT
GGCCAGTACCAGTTCGGGGACCCGTCCCGTCCCAAGAACGCCACCAGGGAGAGCACCAGC
ACGCTGAAGGCCTGGCTCAACGAGCACCGCAAGAACCCCTACCCCACCAAGGGCGAGAAG
ATCATGCTGGCCATCATCACCAAGATGACCCTCACCCAGGTGTCCACCTGGTTCGCCAAC
GCGCGCCGGCGCCTCAAGAAGGAGAATAAGATGACTTGGGCGCCTCGCAGCCGCACTGAC
GAGGAGGGAAACGCTTATGGGAGCGAGCGCGAGGAGGAAGACGAAGAGGAGGACGAGGAG
GACGGCAAACGCGAGCTAGAGCTGGAGGAGGAGGAGCTCGGGGGGGAGGAGGAGGACACG
GGGGGCGAGGGCCTGGCTGACGACGACGAGGACGAGGAGATCGATTTGGAGAACTTAGAC
GGCGCGGCCACCGAGCCTGAGCTGTCCCTGGCTGGGGCGGCGCGCAGGGATGGCGACCTA
GGCCTGGGACCCATTTCGGACTCCAAAAATAGCGACTCGGAAGATAGCTCTGAGGGCTTA
GAGGACCGGCCACTACCGGTCCTGAGTCTGGCTCCAGCGCCACCACCAGTGGCCGTGGCC
TCGCCGTCTCTGCCGTCGCCCCCCGTGAGCCTGGACCCCTGCGCTCCCGCACCAGCCCCC
GCCTCCGCCCTGCAGAAGCCCAAGATCTGGTCCCTCGCGGAGACTGCCACAAGCCCGGAC
AACCCGCGCCGCTCGCCTCCCGGCGCGGGGGGGTCTCCACCGGGGGCAGCGGTCGCGCCT
TCCGCCCTGCAGCTCTCTCCGGCCGCCGCCGCCGCCGCCGCTCACAGACTGGTCTCAGCG
CCGCTGGGCAAGTTCCCGGCTTGGACCAACCGGCCGTTTCCAGGCCCACCGCCCGGCCCC
CGCCCGCACCCGCTCTCCCTGCTGGGCTCTGCCCCTCCGCACCTGCTGGGACTTCCCGGA
GCCGCGGGCCACCCGGCTGCCGCCGCCGCCTTCGCTCGGCCAGCGGAGCCCGAAGGCGGA
ACAGATCGCTGTAGTGCCTTGGAAGTGGAGAAAAAGTTACTCAAGACAGCTTTCCAGCCC
GTGCCCAGGCGGCCCCAGAACCATCTGGACGCCGCCCTGGTCTTATCGGCTCTCTCCTCA
TCC

ORF Protein

Cloned ORF protein sequence for pFN21AB7764 Download

>KIBB7764  501 aa
MSFPQLGYQYIRPLYPSERPGAAGGSGGSAGARGGLGAGASELNASGSLSNVLSSVYGAP
YAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQHPAAAAAFPHPHPAFYPY
GQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEEDT
GGEGLADDDEDEEIDLENLDGAATEPELSLAGAARRDGDLGLGPISDSKNSDSEDSSEGL
EDRPLPVLSLAPAPPPVAVASPSLPSPPVSLDPCAPAPAPASALQKPKIWSLAETATSPD
NPRRSPPGAGGSPPGAAVAPSALQLSPAAAAAAAHRLVSAPLGKFPAWTNRPFPGPPPGP
RPHPLSLLGSAPPHLLGLPGAAGHPAAAAAFARPAEPEGGTDRCSALEVEKKLLKTAFQP
VPRRPQNHLDAALVLSALSSS

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7764 Download

>pFN21AB7764  6208 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTCCTTCCCCCAGCTGGGATACCAATACATCCG
CCCGCTTTACCCGTCCGAGCGCCCGGGGGCCGCTGGCGGCAGCGGCGGCAGCGCGGGGGC
CCGGGGCGGCCTGGGTGCCGGAGCCTCGGAGCTGAACGCCTCGGGGTCCCTGTCCAACGT
GCTCTCGTCCGTGTACGGGGCGCCCTACGCCGCGGCCGCTGCGGCCGCCGCCGCCCAAGG
CTACGGCGCCTTCCTGCCCTACGCCGCGGAGCTGCCCATCTTCCCGCAGCTGGGCGCGCA
GTATGAGCTGAAGGACAGCCCCGGGGTGCAGCATCCGGCCGCGGCTGCCGCGTTTCCGCA
CCCGCACCCCGCCTTCTACCCGTATGGCCAGTACCAGTTCGGGGACCCGTCCCGTCCCAA
GAACGCCACCAGGGAGAGCACCAGCACGCTGAAGGCCTGGCTCAACGAGCACCGCAAGAA
CCCCTACCCCACCAAGGGCGAGAAGATCATGCTGGCCATCATCACCAAGATGACCCTCAC
CCAGGTGTCCACCTGGTTCGCCAACGCGCGCCGGCGCCTCAAGAAGGAGAATAAGATGAC
TTGGGCGCCTCGCAGCCGCACTGACGAGGAGGGAAACGCTTATGGGAGCGAGCGCGAGGA
GGAAGACGAAGAGGAGGACGAGGAGGACGGCAAACGCGAGCTAGAGCTGGAGGAGGAGGA
GCTCGGGGGGGAGGAGGAGGACACGGGGGGCGAGGGCCTGGCTGACGACGACGAGGACGA
GGAGATCGATTTGGAGAACTTAGACGGCGCGGCCACCGAGCCTGAGCTGTCCCTGGCTGG
GGCGGCGCGCAGGGATGGCGACCTAGGCCTGGGACCCATTTCGGACTCCAAAAATAGCGA
CTCGGAAGATAGCTCTGAGGGCTTAGAGGACCGGCCACTACCGGTCCTGAGTCTGGCTCC
AGCGCCACCACCAGTGGCCGTGGCCTCGCCGTCTCTGCCGTCGCCCCCCGTGAGCCTGGA
CCCCTGCGCTCCCGCACCAGCCCCCGCCTCCGCCCTGCAGAAGCCCAAGATCTGGTCCCT
CGCGGAGACTGCCACAAGCCCGGACAACCCGCGCCGCTCGCCTCCCGGCGCGGGGGGGTC
TCCACCGGGGGCAGCGGTCGCGCCTTCCGCCCTGCAGCTCTCTCCGGCCGCCGCCGCCGC
CGCCGCTCACAGACTGGTCTCAGCGCCGCTGGGCAAGTTCCCGGCTTGGACCAACCGGCC
GTTTCCAGGCCCACCGCCCGGCCCCCGCCCGCACCCGCTCTCCCTGCTGGGCTCTGCCCC
TCCGCACCTGCTGGGACTTCCCGGAGCCGCGGGCCACCCGGCTGCCGCCGCCGCCTTCGC
TCGGCCAGCGGAGCCCGAAGGCGGAACAGATCGCTGTAGTGCCTTGGAAGTGGAGAAAAA
GTTACTCAAGACAGCTTTCCAGCCCGTGCCCAGGCGGCCCCAGAACCATCTGGACGCCGC
CCTGGTCTTATCGGCTCTCTCCTCATCCGTTTAAACGAATTCGGGCTCGGTACCCGGGGA
TCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGG
AAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCG
CTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAG
TGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATA
AGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGG
GAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTC
TAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTC
ATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCA
GGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAA
AGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTT
TGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAG
TTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGT
TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCG
GTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTA
AGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTG
ACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTA
ACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGAC
ACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTT
ACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCA
CTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAG
CGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTA
GTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAG
ATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAAC
CGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAG
GAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGC
TGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTC
AGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCC
TCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTT
CGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCG
TTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTAT
CCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAG
CCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGT
GGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGC
CAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTA
GCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAG
ATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGA
TTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATA
CAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTT
CAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGG
TTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCT
GTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGG
TAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACG
ATGCGTCCGGCGTAGAGGATCGAGATCT