ZNF18 ORF clone FHC07444

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC07444

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Clone info.

Species

human

Clone Name

pFN21AB7853 Sequence (with vector) Restriction Map

Product ID

FHC07444

Flexi Clone PID

FXC07444

ORF Sequence

DNA sequence (1647 bp)
Protein sequence (549 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464379]

Gene

KIBB7853

Symbol

ZNF18

Alias : HDSG1, KOX11, ZKSCAN6, ZNF535, ZSCAN38, Zfp535

Description

zinc finger protein 18, transcript variant 1

Original Clone ID

cs00353

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 1647 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 549 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS32568.1 1.9e-134 100.0 ZNF18 CCDS76957.1 8.1e-134 99.8 ZNF18 CCDS5671.2 5.6e-26 33.6 ZSCAN25 CCDS4441.1 3.4e-21 35.5 ZNF454 CCDS12982.1 8e-21 33.7 ZNF446 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 36 128 PF02023 Transcription regulator SCAN IPR001909 222 249 PF01352 Krueppel-associated box IPR007087 409 430 PF00096 Zinc finger IPR007087 436 458 PF00096 Zinc finger IPR007087 492 514 PF00096 Zinc finger IPR007087 520 542 PF00096 Zinc finger HMMSmart IPR003309 37 149 SM00431 Transcription regulator SCAN IPR001909 222 272 SM00349 Krueppel-associated box IPR015880 408 430 SM00355 Zinc finger IPR015880 436 458 SM00355 Zinc finger IPR015880 464 486 SM00355 Zinc finger IPR015880 492 514 SM00355 Zinc finger IPR015880 520 542 SM00355 Zinc finger ProfileScan IPR003309 41 120 PS50804 Transcription regulator SCAN IPR001909 211 283 PS50805 Krueppel-associated box IPR007087 408 435 PS50157 Zinc finger IPR007087 436 463 PS50157 Zinc finger IPR007087 464 491 PS50157 Zinc finger IPR007087 492 519 PS50157 Zinc finger IPR007087 520 547 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011522304 549 194524 100.0 100.0 NP_001290210 549 194524 100.0 100.0 XP_016880496 549 194524 100.0 100.0 NP_653281 549 194524 100.0 100.0 XP_016880495 549 194524 100.0 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7853 Download

>KIBB7853  1647 bp
ATGCCCGTTGACTTGGGGCAGGCCCTAGGCCTGCTGCCATCGCTGGCGAAGGCCGAGGAC
TCCCAGTTCTCAGAATCAGATGCTGCCCTTCAAGAGGAACTCTCCAGCCCTGAGACCGCA
CGCCAGCTTTTCAGGCAGTTCCGTTACCAGGTGATGTCTGGGCCTCATGAGACCTTGAAG
CAACTTCGGAAGCTCTGTTTCCAGTGGCTACAGCCAGAGGTTCACACCAAAGAGCAGATC
CTAGAGATCCTCATGTTGGAGCAGTTTCTGACCATCCTGCCTGGGGAGATCCAGATGTGG
GTGCGGAAACAGTGTCCAGGAAGTGGAGAAGAGGCAGTGACCCTTGTGGAAAGCTTGAAG
GGGGACCCCCAGAGACTGTGGCAATGGATCAGTATCCAGGTTCTAGGACAGGACATCTTA
TCAGAGAAGATGGAATCTCCAAGCTGCCAAGTGGGGGAAGTGGAGCCCCATCTTGAAGTG
GTGCCTCAGGAGTTGGGACTTGAGAATTCATCCTCAGGGCCTGGGGAGCTTCTGAGCCAC
ATCGTGAAAGAGGAATCTGACACAGAAGCAGAACTAGCCCTGGCTGCCTCCCAGCCTGCC
CGACTGGAGGAAAGGCTGATCAGAGACCAGGACCTCGGAGCCTCACTGCTCCCAGCAGCA
CCTCAGGAACAGTGGAGACAACTGGATTCCACTCAAAAGGAGCAATACTGGGATCTCATG
CTGGAGACCTATGGGAAAATGGTCTCAGGAGCAGGCATTTCCCATCCCAAATCTGACCTG
ACTAATTCAATAGAATTTGGGGAAGAGCTGGCAGGAATATACCTTCATGTCAATGAGAAG
ATCCCAAGACCCACCTGCATAGGAGATAGACAAGAGAATGACAAGGAGAACCTAAATTTG
GAGAATCACAGGGACCAGGAGCTCCTGCATGCTTCCTGTCAAGCTTCAGGAGAGGTTCCT
TCTCAGGCTTCCTTGAGGGGCTTCTTCACTGAGGATGAGCCAGGATGCTTTGGAGAAGGA
GAGAATCTCCCTGAGGCTCTGCAAAACATTCAGGATGAGGGAACAGGGGAACAGCTGTCT
CCTCAAGAAAGGATTTCTGAGAAACAACTAGGTCAGCATTTGCCTAATCCTCATTCAGGA
GAAATGTCCACCATGTGGCTTGAGGAGAAGAGAGAGACCTCCCAGAAGGGGCAGCCAAGA
GCCCCCATGGCCCAGAAGCTCCCCACCTGCAGGGAGTGTGGGAAGACCTTTTATAGGAAT
TCTCAGCTTATTTTTCACCAAAGAACTCACACCGGAGAGACATACTTTCAGTGCACCATC
TGCAAAAAAGCCTTTCTGCGGAGTTCAGACTTTGTGAAGCATCAGAGAACTCACACGGGA
GAGAAGCCCTGTAAATGTGATTACTGTGGGAAAGGCTTTAGTGACTTCTCAGGATTGCGC
CACCACGAGAAAATCCACACAGGAGAGAAACCCTATAAATGTCCTATCTGTGAGAAAAGT
TTCATTCAGAGATCAAACTTTAATAGACATCAGAGGGTTCACACTGGAGAGAAACCTTAT
AAATGTTCGCACTGTGGGAAAAGTTTCAGCTGGAGCTCGAGCCTTGACAAACATCAAAGA
TCCCACTTAGGAAAGAAGCCCTTTCAA

ORF Protein

Cloned ORF protein sequence for pFN21AB7853 Download

>KIBB7853  549 aa
MPVDLGQALGLLPSLAKAEDSQFSESDAALQEELSSPETARQLFRQFRYQVMSGPHETLK
QLRKLCFQWLQPEVHTKEQILEILMLEQFLTILPGEIQMWVRKQCPGSGEEAVTLVESLK
GDPQRLWQWISIQVLGQDILSEKMESPSCQVGEVEPHLEVVPQELGLENSSSGPGELLSH
IVKEESDTEAELALAASQPARLEERLIRDQDLGASLLPAAPQEQWRQLDSTQKEQYWDLM
LETYGKMVSGAGISHPKSDLTNSIEFGEELAGIYLHVNEKIPRPTCIGDRQENDKENLNL
ENHRDQELLHASCQASGEVPSQASLRGFFTEDEPGCFGEGENLPEALQNIQDEGTGEQLS
PQERISEKQLGQHLPNPHSGEMSTMWLEEKRETSQKGQPRAPMAQKLPTCRECGKTFYRN
SQLIFHQRTHTGETYFQCTICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSGLR
HHEKIHTGEKPYKCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQR
SHLGKKPFQ

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7853 Download

>pFN21AB7853  6352 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGCCCGTTGACTTGGGGCAGGCCCTAGGCCTGCT
GCCATCGCTGGCGAAGGCCGAGGACTCCCAGTTCTCAGAATCAGATGCTGCCCTTCAAGA
GGAACTCTCCAGCCCTGAGACCGCACGCCAGCTTTTCAGGCAGTTCCGTTACCAGGTGAT
GTCTGGGCCTCATGAGACCTTGAAGCAACTTCGGAAGCTCTGTTTCCAGTGGCTACAGCC
AGAGGTTCACACCAAAGAGCAGATCCTAGAGATCCTCATGTTGGAGCAGTTTCTGACCAT
CCTGCCTGGGGAGATCCAGATGTGGGTGCGGAAACAGTGTCCAGGAAGTGGAGAAGAGGC
AGTGACCCTTGTGGAAAGCTTGAAGGGGGACCCCCAGAGACTGTGGCAATGGATCAGTAT
CCAGGTTCTAGGACAGGACATCTTATCAGAGAAGATGGAATCTCCAAGCTGCCAAGTGGG
GGAAGTGGAGCCCCATCTTGAAGTGGTGCCTCAGGAGTTGGGACTTGAGAATTCATCCTC
AGGGCCTGGGGAGCTTCTGAGCCACATCGTGAAAGAGGAATCTGACACAGAAGCAGAACT
AGCCCTGGCTGCCTCCCAGCCTGCCCGACTGGAGGAAAGGCTGATCAGAGACCAGGACCT
CGGAGCCTCACTGCTCCCAGCAGCACCTCAGGAACAGTGGAGACAACTGGATTCCACTCA
AAAGGAGCAATACTGGGATCTCATGCTGGAGACCTATGGGAAAATGGTCTCAGGAGCAGG
CATTTCCCATCCCAAATCTGACCTGACTAATTCAATAGAATTTGGGGAAGAGCTGGCAGG
AATATACCTTCATGTCAATGAGAAGATCCCAAGACCCACCTGCATAGGAGATAGACAAGA
GAATGACAAGGAGAACCTAAATTTGGAGAATCACAGGGACCAGGAGCTCCTGCATGCTTC
CTGTCAAGCTTCAGGAGAGGTTCCTTCTCAGGCTTCCTTGAGGGGCTTCTTCACTGAGGA
TGAGCCAGGATGCTTTGGAGAAGGAGAGAATCTCCCTGAGGCTCTGCAAAACATTCAGGA
TGAGGGAACAGGGGAACAGCTGTCTCCTCAAGAAAGGATTTCTGAGAAACAACTAGGTCA
GCATTTGCCTAATCCTCATTCAGGAGAAATGTCCACCATGTGGCTTGAGGAGAAGAGAGA
GACCTCCCAGAAGGGGCAGCCAAGAGCCCCCATGGCCCAGAAGCTCCCCACCTGCAGGGA
GTGTGGGAAGACCTTTTATAGGAATTCTCAGCTTATTTTTCACCAAAGAACTCACACCGG
AGAGACATACTTTCAGTGCACCATCTGCAAAAAAGCCTTTCTGCGGAGTTCAGACTTTGT
GAAGCATCAGAGAACTCACACGGGAGAGAAGCCCTGTAAATGTGATTACTGTGGGAAAGG
CTTTAGTGACTTCTCAGGATTGCGCCACCACGAGAAAATCCACACAGGAGAGAAACCCTA
TAAATGTCCTATCTGTGAGAAAAGTTTCATTCAGAGATCAAACTTTAATAGACATCAGAG
GGTTCACACTGGAGAGAAACCTTATAAATGTTCGCACTGTGGGAAAAGTTTCAGCTGGAG
CTCGAGCCTTGACAAACATCAAAGATCCCACTTAGGAAAGAAGCCCTTTCAAGTTTAAAC
GAATTCGGGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATC
CGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAAC
TAGCATAACCCCTTGGGGCGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTT
GGACAAACCACAACTAGAATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCT
ATTGCTTTATTTGTAACCATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATT
CATTTTATGTTTCAGGTTCAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTC
TACAAATGTGGTAAAATCGAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTC
CAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTC
TACGTAATGGTTTCTTAGACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCT
ATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGA
TAAATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCC
CTTATTCCCTTTTTTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTG
AAAGTAAAAGATGCTGAAGATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTC
AACAGCGGTAAGATCCTTGAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACT
TTCAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTC
GGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAG
CATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGAT
AACACTGCGGCCAACTTACTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTT
TTGCACAACATGGGGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAA
GCCATACCAAACGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGC
AAACTATTAACTGGCGAACTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATG
GAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATT
GCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCA
GATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT
GAACGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAA
ATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTAT
CCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCA
GGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGC
ATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACC
AGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCG
GATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTA
GGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCG
TTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGAC
ACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAG
GCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTAT
TTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGAT
CCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGC
GCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGT
GGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCT
AGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGG
TGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCT
CTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCG
GGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCG
GTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAG
ATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT