ZDHHC3 ORF clone FHC01939

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC01939

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Clone info.

Species

human

Clone Name

pFN21AB7643 Sequence (with vector) Restriction Map

Product ID

FHC01939

Flexi Clone PID

FXC01939

ORF Sequence

DNA sequence (897 bp)
Protein sequence (299 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527464]

Gene

KIBB7643

Symbol

ZDHHC3

Alias : DHHC-3, DHHC3, GODZ, ZNF373

Description

zinc finger, DHHC-type containing 3, transcript variant 1

Original Clone ID

cs00143

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 897 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 299 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS46811.1 2.6e-135 100.0 ZDHHC3 CCDS2724.1 3e-91 91.1 ZDHHC3 CCDS10950.1 2.6e-84 64.9 ZDHHC7 CCDS45538.1 8.4e-61 61.9 ZDHHC7 CCDS6475.1 3.2e-23 29.9 ZDHHC21 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001594 129 181 PF01529 Zinc finger ProfileScan IPR001594 129 177 PS50216 Zinc finger
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 46 ACAIVTWFLVLYAEFVVLFVMLI 68 PRIMARY 23 2 79 NGIVFNLLAFLALASHCRAMLTD 101 SECONDARY 23 3 173 VLFTMYIALISLHALIMVGFHFL 195 PRIMARY 23 4 211 PTTVILLILLCFEGLLFLIFTSV 233 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001128651 299 617150 100.0 100.0 XP_016862055 299 617150 100.0 100.0 XP_016862056 299 617150 100.0 100.0 XP_005265269 329 617150 91.3 96.7 XP_016862051 350 617150 89.8 93.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AB7643 Download

>KIBB7643  897 bp
ATGATGCTTATCCCCACCCACCACTTCCGAAACATTGAGCGGAAACCAGAATACCTCCAG
CCAGAGAAGTGTGTCCCACCCCCCTACCCTGGTCCTGTGGGAACCATGTGGTTTATCCGT
GACGGCTGTGGCATCGCCTGTGCCATCGTTACCTGGTTTCTGGTCCTCTATGCGGAGTTC
GTGGTCCTCTTTGTCATGCTGATTCCATCTCGAGACTACGTGTATAGCATCATCAACGGA
ATTGTGTTCAACCTGCTGGCCTTCTTGGCCCTGGCCTCCCACTGCCGGGCCATGCTGACG
GACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAAAGAATTCATCGAGAGTTTACAGTTG
AAGCCTGGGCAGGTGGTGTACAAGTGCCCCAAATGCTGCAGCATCAAGCCCGACCGAGCC
CACCACTGCAGTGTTTGTAAGCGGTGCATTCGGAAGATGGACCACCACTGTCCCTGGGTC
AACAACTGTGTAGGCGAGAACAACCAGAAGTACTTCGTCCTGTTTACAATGTACATAGCT
CTCATTTCCTTGCACGCCCTCATCATGGTGGGATTCCACTTCCTGCATTGCTTTGAAGAA
GATTGGACAAAGTGCAGCTCCTTCTCTCCACCCACCACAGTGATTCTCCTTATCCTGCTG
TGCTTTGAGGGCCTGCTCTTCCTCATTTTCACATCAGTGATGTTTGGGACCCAGGTGCAC
TCCATCTGCACAGATGAGACGGGAATAGAACAATTGAAAAAGGAAGAGAGAAGATGGGCT
AAAAAAACAAAATGGATGAACATGAAAGCCGTTTTTGGCCACCCCTTCTCTCTAGGCTGG
GCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGCAGACCCGTACCAGTATGTGGTC

ORF Protein

Cloned ORF protein sequence for pFN21AB7643 Download

>KIBB7643  299 aa
MMLIPTHHFRNIERKPEYLQPEKCVPPPYPGPVGTMWFIRDGCGIACAIVTWFLVLYAEF
VVLFVMLIPSRDYVYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQL
KPGQVVYKCPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIA
LISLHALIMVGFHFLHCFEEDWTKCSSFSPPTTVILLILLCFEGLLFLIFTSVMFGTQVH
SICTDETGIEQLKKEERRWAKKTKWMNMKAVFGHPFSLGWASPFATPDQGKADPYQYVV

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AB7643 Download

>pFN21AB7643  5602 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGATGCTTATCCCCACCCACCACTTCCGAAACAT
TGAGCGGAAACCAGAATACCTCCAGCCAGAGAAGTGTGTCCCACCCCCCTACCCTGGTCC
TGTGGGAACCATGTGGTTTATCCGTGACGGCTGTGGCATCGCCTGTGCCATCGTTACCTG
GTTTCTGGTCCTCTATGCGGAGTTCGTGGTCCTCTTTGTCATGCTGATTCCATCTCGAGA
CTACGTGTATAGCATCATCAACGGAATTGTGTTCAACCTGCTGGCCTTCTTGGCCCTGGC
CTCCCACTGCCGGGCCATGCTGACGGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAA
AGAATTCATCGAGAGTTTACAGTTGAAGCCTGGGCAGGTGGTGTACAAGTGCCCCAAATG
CTGCAGCATCAAGCCCGACCGAGCCCACCACTGCAGTGTTTGTAAGCGGTGCATTCGGAA
GATGGACCACCACTGTCCCTGGGTCAACAACTGTGTAGGCGAGAACAACCAGAAGTACTT
CGTCCTGTTTACAATGTACATAGCTCTCATTTCCTTGCACGCCCTCATCATGGTGGGATT
CCACTTCCTGCATTGCTTTGAAGAAGATTGGACAAAGTGCAGCTCCTTCTCTCCACCCAC
CACAGTGATTCTCCTTATCCTGCTGTGCTTTGAGGGCCTGCTCTTCCTCATTTTCACATC
AGTGATGTTTGGGACCCAGGTGCACTCCATCTGCACAGATGAGACGGGAATAGAACAATT
GAAAAAGGAAGAGAGAAGATGGGCTAAAAAAACAAAATGGATGAACATGAAAGCCGTTTT
TGGCCACCCCTTCTCTCTAGGCTGGGCCAGCCCCTTTGCCACGCCAGACCAAGGGAAGGC
AGACCCGTACCAGTATGTGGTCGTTTAAACGAATTCGGGCTCGGTACCCGGGGATCCTCT
AGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTG
AGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCGGCCGCTTCGA
GCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGAATGCAGTGAAAA
AAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACCATTATAAGCTGC
AATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTTCAGGGGGAGATG
TGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATCGAATTCTAATGG
ATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGG
GGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAGACGTCAGGTGGC
ACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAAATACATTCAAAT
ATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATATTGAAAAAGGAAG
AGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT
CCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTGGGT
GCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGC
CCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGTGGCGCGGTATTA
TCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGAC
TTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAA
TTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTACTTCTGACAACT
ATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGATCATGTAACTCGC
CTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGACACCACG
ATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTA
GCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTG
CGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGG
TCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATC
TACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATCGCTGAGATAGGT
GCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACGCCCAACCGGTAT
CAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGA
ACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGT
TTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGT
GGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGC
GCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAA
GCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCT
CCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTA
ACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTG
GTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGC
CTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTA
CCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTG
GTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTT
TGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGG
TCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAA
CGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGG
ATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAA
TTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGC
TGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATC
CACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGT
CCGGCGTAGAGGATCGAGATCT