SUSD6 ORF clone FHC00041

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KOP HaloTag ORF List Flexi search

Halotag ORF Clone FHC00041

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Clone info.

Species

human

Clone Name

pFN21AA0247 Sequence (with vector) Restriction Map

Product ID

FHC00041

Flexi Clone PID

FXC00041

ORF Sequence

DNA sequence (909 bp)
Protein sequence (303 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pFN21A Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384452]

Gene

KIAA0247

Symbol

SUSD6

Alias : DRAGO, KIAA0247

Description

sushi domain containing 6

Original Clone ID

ha07001

Quality control data of this clone

Description

Characterization of the cloned ORF

5'-end(FN21F1)

3'-end(F1KR)

Agarose gel electrophoretic image

5'/3'-end sequences (chromatogram)

N-terminal HaloTag-fusions expressed in HEK293 visualized by HaloTag TMR ligand

Cell image

SDS-PAGE

Features of the cloned ORF sequence

Description

Length: 909 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 303 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9796.1 3.6e-112 100.0 SUSD6 CCDS41471.1 8.3e-20 35.3 SUSD4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000436 42 102 PF00084 Sushi/SCR/CCP HMMSmart IPR000436 42 102 SM00032 Sushi/SCR/CCP ProfileScan IPR000436 40 104 PS50923 Sushi/SCR/CCP
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 14 FAVASVGHGVFLPLVILCTLLGD 36 SECONDARY 23 2 119 LSIVASTASSVALILLLVVLFVL 141 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011535714 303 616761 100.0 100.0 NP_055549 303 616761 100.0 100.0 XP_016877328 303 616761 100.0 100.0 XP_016877327 303 616761 100.0 100.0 XP_011535715 278 616761 99.2 87.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pFN21AA0247 Download

>KIAA0247  909 bp
ATGTGCCATGGCAGGATAGCACCAAAGAGCACCTCAGTGTTTGCCGTGGCCTCCGTGGGA
CATGGAGTGTTCCTTCCGCTAGTGATCCTTTGCACCCTGCTTGGAGACGGACTTGCTTCC
GTGTGCCCCCTACCACCGGAGCCAGAGAATGGTGGCTACATCTGCCACCCCCGGCCCTGC
AGAGACCCCCTGACAGCAGGCAGTGTCATCGAATACCTGTGTGCTGAAGGCTACATGTTG
AAGGGCGATTACAAATACCTGACGTGTAAGAATGGCGAGTGGAAACCAGCCATGGAGATT
AGCTGCCGTCTCAACGAGGATAAAGACACCCACACATCACTTGGGGTCCCCACGCTGTCT
ATAGTGGCTTCTACTGCCAGCTCCGTGGCGCTCATTCTCCTCCTCGTGGTGCTGTTTGTG
CTGCTGCAGCCAAAGCTGAAGTCTTTCCATCATAGCAGGCGTGACCAGGGGGTATCTGGG
GACCAGGTCTCCATCATGGTGGATGGAGTCCAGGTTGCACTACCATCATACGAGGAGGCT
GTATATGGCAGTTCTGGTCACTGTGTGCCACCTGCTGACCCCAGAGTACAGATTGTGCTG
TCAGAAGGGTCTGGGCCCAGTGGGAGGAGCGTGCCAAGGGAGCAACAGCTGCCGGACCAA
GGGGCCTGCTCCTCTGCAGGTGGAGAAGATGAGGCCCCAGGCCAGTCTGGACTATGTGAA
GCCTGGGGCTCTCGGGCCTCAGAGACTGTGATGGTGCATCAGGCAACCACCTCTTCCTGG
GTGGCCGGCTCAGGGAACCGCCAACTGGCACACAAAGAAACTGCAGATTCAGAGAACAGT
GACATACAAAGCCTTTTATCCCTCACGTCAGAGGAGTACACAGATGATATTCCACTGTTG
AAAGAAGCA

ORF Protein

Cloned ORF protein sequence for pFN21AA0247 Download

>KIAA0247  303 aa
MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLASVCPLPPEPENGGYICHPRPC
RDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAMEISCRLNEDKDTHTSLGVPTLS
IVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGVSGDQVSIMVDGVQVALPSYEEA
VYGSSGHCVPPADPRVQIVLSEGSGPSGRSVPREQQLPDQGACSSAGGEDEAPGQSGLCE
AWGSRASETVMVHQATTSSWVAGSGNRQLAHKETADSENSDIQSLLSLTSEEYTDDIPLL
KEA

ORF+Vector

Nucleotide Sequence (with vector) for pFN21AA0247 Download

>pFN21AA0247  5614 bp
TCAATATTGGCCATTAGCCATATTATTCATTGGTTATATAGCATAAATCAATATTGGCTA
TTGGCCATTGCATACGTTGTATCTATATCATAATATGTACATTTATATTGGCTCATGTCC
AATATGACCGCCATGTTGGCATTGATTATTGACTAGTTATTAATAGTAATCAATTACGGG
GTCATTAGTTCATAGCCCATATATGGAGTTCCGCGTTACATAACTTACGGTAAATGGCCC
GCCTGGCTGACCGCCCAACGACCCCCGCCCATTGACGTCAATAATGACGTATGTTCCCAT
AGTAACGCCAATAGGGACTTTCCATTGACGTCAATGGGTGGAGTATTTACGGTAAACTGC
CCACTTGGCAGTACATCAAGTGTATCATATGCCAAGTCCGCCCCCTATTGACGTCAATGA
CGGTAAATGGCCCGCCTGGCATTATGCCCAGTACATGACCTTACGGGACTTTCCTACTTG
GCAGTACATCTACGTATTAGTCATCGCTATTACCATGGTGATGCGGTTTTGGCAGTACAC
CAATGGGCGTGGATAGCGGTTTGACTCACGGGGATTTCCAAGTCTCCACCCCATTGACGT
CAATGGGAGTTTGTTTTGGCACCAAAATCAACGGGACTTTCCAAAATGTCGTAATAACCC
CGCCCCGTTGACGCAAATGGGCGGTAGGCGTGTACGGTGGGAGGTCTATATAAGCAGAGC
TGGTTTAGTGAACCGTCAGATCACTAGAAGCTTTATTGCGGTAGTTTATCACAGTTAAAT
TGCTAACGCAGTCAGTGCTTCTGACACAACAGTCTCGAACTTAAGCTGCAGAAGTTGGTC
GTGAGGCACTGGGCAGGTAAGTATCAAGGTTACAAGACAGGTTTAAGGAGACCAATAGAA
ACTGGGCTTGTCGAGACAGAGAAGACTCTTGCGTTTCTGATAGGCACCTATTGGTCTTAC
TGACATCCACTTTGCCTTTCTCTCCACAGGTGTCCACTCCCAGTTCAATTACAGCTCTTA
AGGCTAGAGTATTAATACGACTCACTATAGGGCTAGCAAAGCCACCATGGCAGAAATCGG
TACTGGCTTTCCATTCGACCCCCATTATGTGGAAGTCCTGGGCGAGCGCATGCACTACGT
CGATGTTGGTCCGCGCGATGGCACCCCTGTGCTGTTCCTGCACGGTAACCCGACCTCCTC
CTACGTGTGGCGCAACATCATCCCGCATGTTGCACCGACCCATCGCTGCATTGCTCCAGA
CCTGATCGGTATGGGCAAATCCGACAAACCAGACCTGGGTTATTTCTTCGACGACCACGT
CCGCTTCATGGATGCCTTCATCGAAGCCCTGGGTCTGGAAGAGGTCGTCCTGGTCATTCA
CGACTGGGGCTCCGCTCTGGGTTTCCACTGGGCCAAGCGCAATCCAGAGCGCGTCAAAGG
TATTGCATTTATGGAGTTCATCCGCCCTATCCCGACCTGGGACGAATGGCCAGAATTTGC
CCGCGAGACCTTCCAGGCCTTCCGCACCACCGACGTCGGCCGCAAGCTGATCATCGATCA
GAACGTTTTTATCGAGGGTACGCTGCCGATGGGTGTCGTCCGCCCGCTGACTGAAGTCGA
GATGGACCATTACCGCGAGCCGTTCCTGAATCCTGTTGACCGCGAGCCACTGTGGCGCTT
CCCAAACGAGCTGCCAATCGCCGGTGAGCCAGCGAACATCGTCGCGCTGGTCGAAGAATA
CATGGACTGGCTGCACCAGTCCCCTGTCCCGAAGCTGCTGTTCTGGGGCACCCCAGGCGT
TCTGATCCCACCGGCCGAAGCCGCTCGCCTGGCCAAAAGCCTGCCTAACTGCAAGGCTGT
GGACATCGGCCCGGGTCTGAATCTGCTGCAAGAAGACAACCCGGACCTGATCGGCAGCGA
GATCGCGCGCTGGCTGTCGACGCTCGAGATTTCCGGCGAGCCAACCACTGAGGATCTGTA
CTTTCAGAGCGATAACGCGATCGCCATGTGCCATGGCAGGATAGCACCAAAGAGCACCTC
AGTGTTTGCCGTGGCCTCCGTGGGACATGGAGTGTTCCTTCCGCTAGTGATCCTTTGCAC
CCTGCTTGGAGACGGACTTGCTTCCGTGTGCCCCCTACCACCGGAGCCAGAGAATGGTGG
CTACATCTGCCACCCCCGGCCCTGCAGAGACCCCCTGACAGCAGGCAGTGTCATCGAATA
CCTGTGTGCTGAAGGCTACATGTTGAAGGGCGATTACAAATACCTGACGTGTAAGAATGG
CGAGTGGAAACCAGCCATGGAGATTAGCTGCCGTCTCAACGAGGATAAAGACACCCACAC
ATCACTTGGGGTCCCCACGCTGTCTATAGTGGCTTCTACTGCCAGCTCCGTGGCGCTCAT
TCTCCTCCTCGTGGTGCTGTTTGTGCTGCTGCAGCCAAAGCTGAAGTCTTTCCATCATAG
CAGGCGTGACCAGGGGGTATCTGGGGACCAGGTCTCCATCATGGTGGATGGAGTCCAGGT
TGCACTACCATCATACGAGGAGGCTGTATATGGCAGTTCTGGTCACTGTGTGCCACCTGC
TGACCCCAGAGTACAGATTGTGCTGTCAGAAGGGTCTGGGCCCAGTGGGAGGAGCGTGCC
AAGGGAGCAACAGCTGCCGGACCAAGGGGCCTGCTCCTCTGCAGGTGGAGAAGATGAGGC
CCCAGGCCAGTCTGGACTATGTGAAGCCTGGGGCTCTCGGGCCTCAGAGACTGTGATGGT
GCATCAGGCAACCACCTCTTCCTGGGTGGCCGGCTCAGGGAACCGCCAACTGGCACACAA
AGAAACTGCAGATTCAGAGAACAGTGACATACAAAGCCTTTTATCCCTCACGTCAGAGGA
GTACACAGATGATATTCCACTGTTGAAAGAAGCAGTTTAAACGAATTCGGGCTCGGTACC
CGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCC
GAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGG
CGGCCGCTTCGAGCAGACATGATAAGATACATTGATGAGTTTGGACAAACCACAACTAGA
ATGCAGTGAAAAAAATGCTTTATTTGTGAAATTTGTGATGCTATTGCTTTATTTGTAACC
ATTATAAGCTGCAATAAACAAGTTAACAACAACAATTGCATTCATTTTATGTTTCAGGTT
CAGGGGGAGATGTGGGAGGTTTTTTTAAGCAAGTAAAACCTCTACAAATGTGGTAAAATC
GAATTCTAATGGATCCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTG
ACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTAATGGTTTCTTAG
ACGTCAGGTGGCACTTTTCGGGGAAATGTGCGCGGAACCCCTATTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCATGAGACAATAACCCTGATAAATGCTTCAATAATAT
TGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCG
GCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAA
GATCAGTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTT
GAGAGTTTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTCAAAGTTCTGCTATGT
GGCGCGGTATTATCCCGTATTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTAT
TCTCAGAATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG
ACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAACACTGCGGCCAACTTA
CTTCTGACAACTATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATGGGGGAT
CATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAG
CGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAA
CTACTTACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCA
GGACCACTTCTGCGCTCGGCCCTTCCGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCC
GGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACTGGGGCCAGATGGTAAGCCCTCCCGT
ATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAACGAAATAGACAGATC
GCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAATTCGAAATGACCGACCAAGCGACG
CCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATA
ACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCG
CGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCT
CAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAA
GCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTC
TCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGT
AGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCG
CCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGG
CAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCT
TGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGC
TGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCG
CTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTC
AAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTT
AAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCG
GAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGG
CAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTC
ATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTT
TTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGA
TTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCG
GCCACGATGCGTCCGGCGTAGAGGATCGAGATCT