Gene/Protein Characteristic Table for pF1KSDA0638

Species
human

Product ID
FXC00584

Corresponding
HaloTag Clone PID

ORF Sequence
DNA sequence (4131 bp)
Protein sequence (1377 aa)

Linker Type
Flexi_RBS type
The extra Tyr-Val-Val codons are attached to the 3'-end of the ORF, because ...

Cloning Site
SgfI-PmeI

GenBank Accession
ORF sequence is derived from [AB383931]

Gene

Symbol
PHLDB1
Alias : LL5A

Description
pleckstrin homology-like domain, family B, member 1

Original Clone ID

Features of the cloned ORF sequence

Length: 4131 bp
Restriction map A Restriction map B
Genomic Structure
Features of the protein sequence

Length: 1377 aa
Result of homology search against nr database ( FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q86UU1 0 100.0 Pleckstrin homo...
Homo sapiens
XP_001162204 0 99.7 pleckstrin homo...
Pan troglodytes
EAW67404 0 99.2 pleckstrin homo...
Homo sapiens
XP_546499 0 95.6 similar to plec...
Canis lupus fam...
XP_001162611 0 98.9 pleckstrin homo...
Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
[ zoom out (x2) ] PF00498 PF00169 SM00233 PS50003

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000253 64 125 PF00498 Forkhead-associated
IPR001849 1257 1370 PF00169 Pleckstrin-like
HMMSmart IPR001849 1257 1372 SM00233 Pleckstrin-like
ProfileScan IPR001849 1256 1370 PS50003 Pleckstrin-like

Result of homology search against disease genes in OMIM database
(FASTA output, Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%)
NP_665696 1210 610298 62.5 86.3
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