Gene/Protein Characteristic Table for
pF1KSDA0414
Species
human
Product ID
FXC00530
Linker Type
Cloning Site
SgfI-PmeI
Description
zinc finger and BTB domain containing 43
Length: 1401 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 467 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source O43298 1.5e-193 100.0 Zinc finger and... Homo sapiens AAP36973 1.5e-193 100.0 zinc finger pro... synthetic construct XP_001097208 2.4e-192 99.3 zinc finger pro... Macaca mulatta XP_851640 7.1e-192 98.7 similar to Zinc... Canis lupus fam... XP_001501808 2.2e-191 98.7 similar to Zinc... Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition BlastProDom IPR007087 400 423 PD000003 Zinc finger HMMPfam IPR013069 23 127 PF00651 BTB/POZ IPR007087 373 394 PF00096 Zinc finger IPR007087 400 422 PF00096 Zinc finger IPR007087 428 450 PF00096 Zinc finger HMMSmart IPR000210 33 127 SM00225 BTB/POZ-like IPR015880 373 394 SM00355 Zinc finger IPR015880 400 422 SM00355 Zinc finger IPR015880 428 448 SM00355 Zinc finger ProfileScan IPR000210 33 97 PS50097 BTB/POZ-like IPR007087 373 399 PS50157 Zinc finger IPR007087 400 427 PS50157 Zinc finger IPR007087 428 457 PS50157 Zinc finger ScanRegExp IPR007087 402 422 PS00028 Zinc finger
Result of homology search against disease genes in OMIM database
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001092740 500 611692 58.3 94.9 NP_056956 539 607646 51.6 95.3 NP_006617 424 605976 55.3 96.1 Inquiries or Suggestions ?
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