Gene/Protein Characteristic Table for
pF1KA0866
Species
human
Product ID
FXC01129
Linker Type
Cloning Site
SgfI-PmeI
Description
myosin, heavy chain 11, smooth muscle
Length: 5916 bp
Restriction map A
Restriction map B
Genomic Structure
-
Length: 1972 aa
Result of homology search against nr database (
FASTA output,
Multiple alignment)
Entry Exp ID% Protein Source P35749 0 100.0 Myosin-11; Myos... Homo sapiens AAS98910 0 99.6 smooth muscle m... Homo sapiens EAW53927 0 99.7 myosin, heavy p... Homo sapiens XP_850764 0 97.9 similar to smoo... Canis lupus fam... XP_862820 0 97.7 similar to smoo... Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition BlastProDom IPR001609 215 250 PD000355 Myosin head FPrintScan IPR001609 115 134 PR00193 Myosin head IPR001609 171 196 PR00193 Myosin head IPR001609 223 250 PR00193 Myosin head IPR001609 454 482 PR00193 Myosin head IPR001609 508 536 PR00193 Myosin head HMMPfam IPR004009 33 75 PF02736 Myosin IPR001609 87 771 PF00063 Myosin head IPR000048 787 807 PF00612 IQ calmodulin-binding region IPR002928 1073 1930 PF01576 Myosin tail HMMSmart IPR001609 79 784 SM00242 Myosin head IPR000048 785 807 SM00015 IQ calmodulin-binding region ProfileScan IPR000048 786 815 PS50096 IQ calmodulin-binding region
Result of homology search against disease genes in OMIM database
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_002465 1972 132900,160745 100.0 100.0 NP_001035203 1979 132900,160745 99.6 100.0 NP_074035 1938 132900,160745 100.0 97.8 NP_001035202 1945 132900,160745 99.6 97.8 NP_005955 1976 160776 93.4 99.8 Inquiries or Suggestions ?
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