SNRPB2 ORF clone FXC11725

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Flexi ORF Clone FXC11725

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Clone info.

Species

human

Clone Name

pF1KB6918 Sequence (with vector) Restriction Map

Product ID

FXC11725

HaloTag Clone PID

FHC11725

ORF Sequence

DNA sequence (675 bp)
Protein sequence (225 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529189]

Gene

KIBB6918

Symbol

SNRPB2

Alias : Msl1, U2B''

Description

small nuclear ribonucleoprotein polypeptide B, transcript variant 1

Original Clone ID

cs01518

Features of the cloned ORF sequence

Description

Length: 675 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 225 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13123.1 1.6e-71 99.6 SNRPB2 CCDS12565.1 9.4e-27 54.7 SNRPA The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR000504 9 79 PF00076 RNA recognition motif domain IPR000504 153 212 PF00076 RNA recognition motif domain HMMSmart IPR000504 8 82 SM00360 RNA recognition motif domain IPR000504 152 221 SM00360 RNA recognition motif domain ProfileScan IPR000504 7 86 PS50102 RNA recognition motif domain IPR000504 151 225 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_937863 225 603520 99.6 100.0 NP_003083 225 603520 99.6 100.0 NP_004587 282 182285 54.7 89.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB6918 Download

>KIBB6918  675 bp
ATGGATATCAGACCAAATCATACAATTTATATCAACAATATGAATGACAAAATTAAAAAG
GAAGAATTGAAGAGATCCCTATATGCCCTGTTTTCTCAGTTTGGTCATGTGGTGGACATT
GTGGCTTTAAAGACCATGAAGATGAGGGGGCAGGCCTTTGTCATATTTAAGGAACTGGGC
TCATCCACAAATGCCTTGAGACAGCTACAAGGATTTCCATTTTATGGTAAACCAATGCGA
ATACAGTATGCAAAAACAGATTCGGATATAATATCAAAAATGCGTGGAACTTTTGCTGAC
AAAGAAAAGAAAAAAGAAAAGAAAAAAGCCAAAACTGTGGAACAGACTGCAACAACCACA
AACAAAAAGTCTGGCCAGGGAACTCCAAATTCAGCTAATACCCAAGGAAATTCAACACCA
AATCCTCAGGTCCCTGATTACCCTCCAAACTATATTTTATTCCTTAATAACTTACCAGAA
GAGACTAATGAGATGATGTTATCCATGCTGTTTAATCAGTTCCCTGGCTTCAAGGAAGTA
CGTCTGGTACCAGGGAGGCATGACATTGCTTTTGTTGAATTTGAAAATGATGGGCAGGCT
GGAGCTGCCAGGGATGCTTTACAGGGATTTAAGATCACACCGTCCCATGCTATGAAGATC
ACCTATGCCAAGAAA

ORF Protein

Cloned ORF protein sequence for pF1KB6918 Download

>KIBB6918  225 aa
MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG
SSTNALRQLQGFPFYGKPMRIQYAKTDSDIISKMRGTFADKEKKKEKKKAKTVEQTATTT
NKKSGQGTPNSANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEV
RLVPGRHDIAFVEFENDGQAGAARDALQGFKITPSHAMKITYAKK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB6918 Download

>pF1KB6918  3788 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGATATCAGA
CCAAATCATACAATTTATATCAACAATATGAATGACAAAATTAAAAAGGAAGAATTGAAG
AGATCCCTATATGCCCTGTTTTCTCAGTTTGGTCATGTGGTGGACATTGTGGCTTTAAAG
ACCATGAAGATGAGGGGGCAGGCCTTTGTCATATTTAAGGAACTGGGCTCATCCACAAAT
GCCTTGAGACAGCTACAAGGATTTCCATTTTATGGTAAACCAATGCGAATACAGTATGCA
AAAACAGATTCGGATATAATATCAAAAATGCGTGGAACTTTTGCTGACAAAGAAAAGAAA
AAAGAAAAGAAAAAAGCCAAAACTGTGGAACAGACTGCAACAACCACAAACAAAAAGTCT
GGCCAGGGAACTCCAAATTCAGCTAATACCCAAGGAAATTCAACACCAAATCCTCAGGTC
CCTGATTACCCTCCAAACTATATTTTATTCCTTAATAACTTACCAGAAGAGACTAATGAG
ATGATGTTATCCATGCTGTTTAATCAGTTCCCTGGCTTCAAGGAAGTACGTCTGGTACCA
GGGAGGCATGACATTGCTTTTGTTGAATTTGAAAATGATGGGCAGGCTGGAGCTGCCAGG
GATGCTTTACAGGGATTTAAGATCACACCGTCCCATGCTATGAAGATCACCTATGCCAAG
AAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT