TTPAL ORF clone FXC11480

KOP
KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC11480

How to Order Order Information

Clone info.

Species

human

Clone Name

pF1KB3746 Sequence (with vector) Restriction Map

Product ID

FXC11480

HaloTag Clone PID

FHC11480

ORF Sequence

DNA sequence (1026 bp)
Protein sequence (342 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529057]

Gene

KIBB3746

Symbol

TTPAL

Alias : C20orf121

Description

tocopherol (alpha) transfer protein-like, transcript variant 1

Original Clone ID

hh03659

Features of the cloned ORF sequence

Description

Length: 1026 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 342 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13332.2 1e-137 100.0 TTPAL CCDS6176.1 5.7e-33 39.6 CLVS1 CCDS34525.1 6.1e-33 38.5 CLVS2 CCDS6178.1 3.1e-29 39.2 TTPA CCDS32324.1 2.7e-27 33.7 RLBP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001071 80 102 PR00180 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001071 127 151 PR00180 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001071 203 224 PR00180 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001071 236 255 PR00180 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001071 268 277 PR00180 Cellular retinaldehyde binding/alpha-tocopherol transport HMMPfam IPR008273 66 102 PF03765 Cellular retinaldehyde-binding/triple function IPR001251 157 277 PF00650 Cellular retinaldehyde-binding/triple function HMMSmart IPR001251 121 279 SM00516 Cellular retinaldehyde-binding/triple function ProfileScan IPR001251 117 282 PS50191 Cellular retinaldehyde-binding/triple function
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011520172 317 136880,180090,607475,607476 33.7 81.9 NP_000317 317 136880,180090,607475,607476 33.7 81.9 XP_016877949 326 136880,180090,607475,607476 33.7 81.9 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB3746 Download

>KIBB3746  1026 bp
ATGTCCGAAGAAAGTGACTCTCTGAGAACCAGCCCTTCTGTGGCCTCACTCTCTGAAAAT
GAGCTGCCACCACCACCTGAGCCTCCGGGCTATGTGTGCTCACTGACAGAAGACCTGGTC
ACCAAAGCCCGGGAAGAGCTGCAGGAAAAGCCGGAATGGAGACTTCGAGATGTGCAGGCC
CTTCGTGACATGGTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTC
CTGCTGCGCTTCCTCCGAGCCCGCAAGTTTGATTACGACCGGGCCCTGCAGCTCCTCGTC
AACTACCACAGCTGTAGAAGAAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATCAGCC
TTAAAAGATGTCCTTGCTTCCGGGTTCCTCACCGTGCTGCCCCACACTGACCCCAGGGGC
TGCCATGTCGTCTGCATCCGCCCAGACAGATGGATACCAAGCAACTATCCAATTACTGAA
AACATCCGAGCCATATACTTGACCTTAGAAAAACTCATTCAGTCTGAAGAAACCCAGGTG
AATGGAATTGTAATTCTTGCAGACTACAAAGGAGTGAGTTTATCAAAAGCATCTCACTTT
GGCCCTTTTATAGCCAAAAAGGTGATTGGCATCCTCCAGGATGGTTTCCCCATTCGGATA
AAAGCAGTCCATGTGGTGAATGAACCTCGAATATTTAAAGGCATTTTTGCCATCATAAAA
CCATTTCTAAAGGAGAAAATAGCAAACAGATTCTTCCTCCATGGGTCTGACTTGAACTCT
CTCCACACAAACCTTCCAAGAAGCATCCTCCCCAAGGAGTATGGGGGCACGGCTGGGGAG
CTGGACACTGCCACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGAAAGAG
TTCTGCCAACCTGTTCCTGCCTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGAGGGC
CTGACCTCAGATGCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCTGTACTCC
TGCTAC

ORF Protein

Cloned ORF protein sequence for pF1KB3746 Download

>KIBB3746  342 aa
MSEESDSLRTSPSVASLSENELPPPPEPPGYVCSLTEDLVTKAREELQEKPEWRLRDVQA
LRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDRALQLLVNYHSCRRSWPEVFNNLKPSA
LKDVLASGFLTVLPHTDPRGCHVVCIRPDRWIPSNYPITENIRAIYLTLEKLIQSEETQV
NGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIK
PFLKEKIANRFFLHGSDLNSLHTNLPRSILPKEYGGTAGELDTATWNAVLLASEDDFVKE
FCQPVPACDSILGQTLLPEGLTSDAQCDDSLRAVKSQLYSCY

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB3746 Download

>pF1KB3746  4139 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCGAAGAA
AGTGACTCTCTGAGAACCAGCCCTTCTGTGGCCTCACTCTCTGAAAATGAGCTGCCACCA
CCACCTGAGCCTCCGGGCTATGTGTGCTCACTGACAGAAGACCTGGTCACCAAAGCCCGG
GAAGAGCTGCAGGAAAAGCCGGAATGGAGACTTCGAGATGTGCAGGCCCTTCGTGACATG
GTGCGGAAGGAGTACCCCAACCTGAGCACATCCCTCGACGATGCCTTCCTGCTGCGCTTC
CTCCGAGCCCGCAAGTTTGATTACGACCGGGCCCTGCAGCTCCTCGTCAACTACCACAGC
TGTAGAAGAAGCTGGCCCGAAGTCTTCAATAACTTGAAGCCATCAGCCTTAAAAGATGTC
CTTGCTTCCGGGTTCCTCACCGTGCTGCCCCACACTGACCCCAGGGGCTGCCATGTCGTC
TGCATCCGCCCAGACAGATGGATACCAAGCAACTATCCAATTACTGAAAACATCCGAGCC
ATATACTTGACCTTAGAAAAACTCATTCAGTCTGAAGAAACCCAGGTGAATGGAATTGTA
ATTCTTGCAGACTACAAAGGAGTGAGTTTATCAAAAGCATCTCACTTTGGCCCTTTTATA
GCCAAAAAGGTGATTGGCATCCTCCAGGATGGTTTCCCCATTCGGATAAAAGCAGTCCAT
GTGGTGAATGAACCTCGAATATTTAAAGGCATTTTTGCCATCATAAAACCATTTCTAAAG
GAGAAAATAGCAAACAGATTCTTCCTCCATGGGTCTGACTTGAACTCTCTCCACACAAAC
CTTCCAAGAAGCATCCTCCCCAAGGAGTATGGGGGCACGGCTGGGGAGCTGGACACTGCC
ACCTGGAACGCGGTACTGCTGGCTTCAGAAGACGATTTTGTGAAAGAGTTCTGCCAACCT
GTTCCTGCCTGTGACAGCATCCTGGGCCAGACGCTGCTGCCCGAGGGCCTGACCTCAGAT
GCACAGTGTGACGACTCCTTGCGAGCTGTGAAGTCACAGCTGTACTCCTGCTACGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT