ZNF398 ORF clone FXC10443

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Flexi ORF Clone FXC10443

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Clone info.

Species

human

Clone Name

pF1KA1339 Sequence (with vector) Restriction Map

Product ID

FXC10443

HaloTag Clone PID

FHC10443

Original Clone PID

ORK10443

ORF Sequence

DNA sequence (1926 bp)
Protein sequence (642 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527270]

Gene

KIAA1339

Symbol

ZNF398

Alias : P51, P71, ZER6

Description

zinc finger protein 398, transcript variant 1

Original Clone ID

fj00071s1

Features of the cloned ORF sequence

Description

Length: 1926 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 642 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5894.1 2.4e-149 100.0 ZNF398 CCDS47739.1 1.8e-110 100.0 ZNF398 CCDS5895.1 5.3e-46 43.4 ZNF282 CCDS55282.1 6.4e-30 34.2 ZNF250 CCDS34972.1 1e-29 33.7 ZNF250 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022137 37 115 PF12417 Protein of unknown function DUF3669 IPR001909 143 183 PF01352 Krueppel-associated box IPR007087 427 449 PF00096 Zinc finger IPR007087 511 533 PF00096 Zinc finger IPR007087 539 561 PF00096 Zinc finger IPR007087 567 590 PF00096 Zinc finger HMMSmart IPR001909 143 203 SM00349 Krueppel-associated box IPR015880 343 364 SM00355 Zinc finger IPR015880 398 420 SM00355 Zinc finger IPR015880 427 449 SM00355 Zinc finger IPR015880 455 477 SM00355 Zinc finger IPR015880 483 505 SM00355 Zinc finger IPR015880 511 533 SM00355 Zinc finger IPR015880 539 561 SM00355 Zinc finger IPR015880 567 590 SM00355 Zinc finger ProfileScan IPR001909 143 214 PS50805 Krueppel-associated box IPR007087 370 397 PS50157 Zinc finger IPR007087 398 425 PS50157 Zinc finger IPR007087 427 454 PS50157 Zinc finger IPR007087 455 482 PS50157 Zinc finger IPR007087 483 510 PS50157 Zinc finger IPR007087 511 538 PS50157 Zinc finger IPR007087 539 566 PS50157 Zinc finger IPR007087 567 592 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_003566 671 603397 43.4 94.5 NP_036388 495 602386 39.2 88.0 XP_016868136 492 602386 39.3 85.4 XP_005250112 535 602386 39.3 85.4 XP_016868135 494 602386 39.2 88.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1339 Download

>KIAA1339  1926 bp
ATGGCTGAGGCGGCCCCGGCCCCGACATCTGAATGGGACTCCGAGTGCCTTACATCCCTG
CAGCCCCTTCCTCTTCCTACACCCCCAGCAGCAAATGAGGCACACCTGCAGACAGCAGCT
ATCTCTCTGTGGACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAAGGTGGAGATCCAC
AGCCGGCGACTCCTACACCTGGAAGGTCGGACAGGGACAGCAGAGAAGAAACTAGCCAGC
TGTGAAAAGACAGTTACCGAGCTTGGGAACCAGCTGGAGGGCAAGTGGGCCGTGCTGGGA
ACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACTTGGAGAACCTGCTG
CGCAACAGGAACTTCTGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGATATCCCAAAG
GTGCCTGTGGCATTTGATGATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAAAATTA
GAAGAATGGCAAAAGGAACTTTACAAGAATATCATGAAGGGCAACTACGAGTCTCTCATC
TCCATGGATTATGCTATAAATCAACCTGATGTCTTATCTCAGATTCAACCAGAAGGGGAA
CATAATACAGAGGACCAGGCAGGGCCAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAA
GAGCCTGGTATTTCAACATCAGATATTCTGTCTTGGATTAAACAAGAAGAAGAGCCTCAG
GTTGGGGCCCCACCGGAGTCCAAGGAGAGTGACGTGTACAAAAGCACTTATGCTGATGAA
GAGCTTGTCATCAAAGCTGAAGGCCTTGCTAGATCCTCGTTGTGCCCTGAGGTTCCAGTC
CCTTTCTCTTCTCCACCAGCAGCAGCAAAGGATGCTTTTTCAGATGTGGCTTTCAAAAGC
CAGCAGTCTACATCCATGACACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAGCCTCT
GAGGGACAAGTGACTTTTACTCAGTTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAG
CAGGTGTTCTCATGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCAC
CAATGTAGCCATGCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTACT
CCACAGGCGGACCTCAGCAGCACCTCCCAGGACCATGCCAGCGAGACACCCCCCACCTGC
CCACACTGTGCCAGGACTTTTACTCACCCATCAAGACTTACCTACCATCTTCGGGTCCAT
AACAGCACTGAGCGTCCTTTCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACCAGGCT
CGACTCACCAGCCACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCCGCTGTGCCCAGTGC
GGCAGGAGCTTCAGCTTGAAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAG
CGCCCTTTCTCCTGCCCTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCCTGATCCGC
CACCAGATGATCCACACAGGCGAGCGTCCTTACCCCTGCACTGACTGCAGTAAGAGCTTC
ATGCGCAAGGAGCACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGGCCCTTCAGT
TGTCCTCACTGTGGCAAGAGCTTCATCCGCAAGCACCACCTAATGAAACACCAGCGCATC
CACACCGGGGAGCGGCCCTACCCCTGCTCCTACTGTGGCAGGAGCTTCCGCTACAAACAG
ACACTCAAGGACCACCTCCGTTCAGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCA
TCAGGTCAGCCACCCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAACTTCTGGCCTG
GGTGTCAACACTGAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGGGAGTGGAGGGGGA
GTTTTG

ORF Protein

Cloned ORF protein sequence for pF1KA1339 Download

>KIAA1339  642 aa
MAEAAPAPTSEWDSECLTSLQPLPLPTPPAANEAHLQTAAISLWTVVAAVQAIERKVEIH
SRRLLHLEGRTGTAEKKLASCEKTVTELGNQLEGKWAVLGTLLQEYGLLQRRLENLENLL
RNRNFWILRLPPGIKGDIPKVPVAFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLI
SMDYAINQPDVLSQIQPEGEHNTEDQAGPEESEIPTDPSEEPGISTSDILSWIKQEEEPQ
VGAPPESKESDVYKSTYADEELVIKAEGLARSSLCPEVPVPFSSPPAAAKDAFSDVAFKS
QQSTSMTPFGRPATDLPEASEGQVTFTQLGSYPLPPPVGEQVFSCHHCGKNLSQDMLLTH
QCSHATEHPLPCAQCPKHFTPQADLSSTSQDHASETPPTCPHCARTFTHPSRLTYHLRVH
NSTERPFPCPDCPKRFADQARLTSHRRAHASERPFRCAQCGRSFSLKISLLLHQRGHAQE
RPFSCPQCGIDFNGHSALIRHQMIHTGERPYPCTDCSKSFMRKEHLLNHRRLHTGERPFS
CPHCGKSFIRKHHLMKHQRIHTGERPYPCSYCGRSFRYKQTLKDHLRSGHNGGCGGDSDP
SGQPPNPPGPLITGLETSGLGVNTEGLETNQWYGEGSGGGVL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1339 Download

>pF1KA1339  5039 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCTGAGGCG
GCCCCGGCCCCGACATCTGAATGGGACTCCGAGTGCCTTACATCCCTGCAGCCCCTTCCT
CTTCCTACACCCCCAGCAGCAAATGAGGCACACCTGCAGACAGCAGCTATCTCTCTGTGG
ACAGTGGTGGCCGCCGTGCAGGCTATAGAGAGGAAGGTGGAGATCCACAGCCGGCGACTC
CTACACCTGGAAGGTCGGACAGGGACAGCAGAGAAGAAACTAGCCAGCTGTGAAAAGACA
GTTACCGAGCTTGGGAACCAGCTGGAGGGCAAGTGGGCCGTGCTGGGAACCCTGCTGCAG
GAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACTTGGAGAACCTGCTGCGCAACAGGAAC
TTCTGGATCCTGCGGCTCCCTCCAGGTATTAAGGGAGATATCCCAAAGGTGCCTGTGGCA
TTTGATGATGTCTCCATCTACTTTTCCACTCCAGAGTGGGAAAAATTAGAAGAATGGCAA
AAGGAACTTTACAAGAATATCATGAAGGGCAACTACGAGTCTCTCATCTCCATGGATTAT
GCTATAAATCAACCTGATGTCTTATCTCAGATTCAACCAGAAGGGGAACATAATACAGAG
GACCAGGCAGGGCCAGAGGAAAGTGAGATTCCCACAGACCCCAGTGAAGAGCCTGGTATT
TCAACATCAGATATTCTGTCTTGGATTAAACAAGAAGAAGAGCCTCAGGTTGGGGCCCCA
CCGGAGTCCAAGGAGAGTGACGTGTACAAAAGCACTTATGCTGATGAAGAGCTTGTCATC
AAAGCTGAAGGCCTTGCTAGATCCTCGTTGTGCCCTGAGGTTCCAGTCCCTTTCTCTTCT
CCACCAGCAGCAGCAAAGGATGCTTTTTCAGATGTGGCTTTCAAAAGCCAGCAGTCTACA
TCCATGACACCTTTTGGACGTCCAGCCACTGACCTGCCTGAAGCCTCTGAGGGACAAGTG
ACTTTTACTCAGTTGGGTAGCTATCCCCTCCCACCTCCAGTTGGCGAGCAGGTGTTCTCA
TGCCACCACTGTGGCAAGAATCTCAGCCAAGACATGTTGCTGACCCACCAATGTAGCCAT
GCTACTGAGCACCCCTTACCCTGTGCCCAGTGCCCTAAGCACTTTACTCCACAGGCGGAC
CTCAGCAGCACCTCCCAGGACCATGCCAGCGAGACACCCCCCACCTGCCCACACTGTGCC
AGGACTTTTACTCACCCATCAAGACTTACCTACCATCTTCGGGTCCATAACAGCACTGAG
CGTCCTTTCCCCTGTCCTGATTGCCCCAAGCGCTTTGCTGACCAGGCTCGACTCACCAGC
CACCGGAGAGCTCATGCAAGCGAAAGGCCCTTCCGCTGTGCCCAGTGCGGCAGGAGCTTC
AGCTTGAAAATCAGCCTCCTGCTCCACCAGCGGGGTCATGCACAAGAGCGCCCTTTCTCC
TGCCCTCAGTGTGGCATTGACTTCAACGGCCACTCGGCCCTGATCCGCCACCAGATGATC
CACACAGGCGAGCGTCCTTACCCCTGCACTGACTGCAGTAAGAGCTTCATGCGCAAGGAG
CACCTGCTGAACCACCGGCGGCTGCACACAGGCGAGCGGCCCTTCAGTTGTCCTCACTGT
GGCAAGAGCTTCATCCGCAAGCACCACCTAATGAAACACCAGCGCATCCACACCGGGGAG
CGGCCCTACCCCTGCTCCTACTGTGGCAGGAGCTTCCGCTACAAACAGACACTCAAGGAC
CACCTCCGTTCAGGCCACAATGGAGGCTGTGGGGGTGATAGTGACCCATCAGGTCAGCCA
CCCAACCCACCAGGTCCCCTCATAACTGGGCTTGAAACTTCTGGCCTGGGTGTCAACACT
GAAGGTCTAGAGACCAACCAGTGGTATGGGGAAGGGAGTGGAGGGGGAGTTTTGGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAA
AATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGG
ATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACC
GCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAAC
TGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCA
CCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGT
GGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACC
GGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCG
AACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCC
CGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCAC
GAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCT
CTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGC
CAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTT
TCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATAC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT