SIX2 ORF clone FXC06833

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Flexi ORF Clone FXC06833

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Clone info.

Species

human

Clone Name

pF1KB8939 Sequence (with vector) Restriction Map

Product ID

FXC06833

HaloTag Clone PID

FHC06833

ORF Sequence

DNA sequence (873 bp)
Protein sequence (291 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464209]

Gene

KIBB8939

Symbol

SIX2

Description

SIX homeobox 2

Original Clone ID

cp00974

Features of the cloned ORF sequence

Description

Length: 873 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 291 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1822.1 8.6e-65 100.0 SIX2 CCDS9748.1 2.3e-45 74.7 SIX1 CCDS1821.1 9.3e-29 61.2 SIX3 CCDS9747.1 4.4e-28 58.1 SIX6 CCDS9749.2 8.7e-25 50.0 SIX4 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001356 130 180 PF00046 Homeobox HMMSmart IPR001356 125 186 SM00389 Homeobox ProfileScan IPR001356 122 182 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_058628 291 604994 100.0 100.0 XP_005264157 293 604994 99.3 100.0 NP_005973 284 113650,601205,605192,608389 74.7 100.0 NP_031400 246 206900,212550,606326 58.1 80.4 XP_005267816 773 606342 50.0 97.6 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8939 Download

>KIBB8939  873 bp
ATGTCCATGCTGCCCACCTTCGGCTTCACGCAGGAGCAAGTGGCGTGCGTGTGCGAGGTG
CTGCAGCAGGGCGGCAACATCGAGCGGCTGGGCCGCTTCCTGTGGTCGCTGCCCGCCTGC
GAGCACCTTCACAAGAATGAAAGCGTGCTCAAGGCCAAGGCCGTGGTGGCCTTCCACCGC
GGCAACTTCCGCGAGCTCTACAAGATCCTGGAGAGCCACCAGTTCTCGCCGCACAACCAC
GCCAAGCTGCAGCAGCTGTGGCTCAAGGCACACTACATCGAGGCGGAGAAGCTGCGCGGC
CGACCCCTGGGCGCCGTGGGCAAATACCGCGTGCGCCGCAAATTCCCGCTGCCGCGCTCC
ATCTGGGACGGCGAGGAGACCAGCTACTGCTTCAAGGAAAAGAGTCGCAGCGTGCTGCGC
GAGTGGTACGCGCACAACCCCTACCCTTCACCCCGCGAGAAGCGTGAGCTGGCGGAGGCC
ACGGGCCTCACCACCACACAGGTCAGCAACTGGTTCAAGAACCGGCGGCAGCGCGACCGG
GCGGCCGAGGCCAAGGAAAGGGAGAACAACGAGAACTCCAATTCTAACAGCCACAACCCG
CTGAATGGCAGCGGCAAGTCGGTGTTAGGCAGCTCGGAGGATGAGAAGACTCCATCGGGG
ACGCCAGACCACTCATCATCCAGCCCCGCACTGCTCCTCAGCCCGCCGCCCCCTGGGCTG
CCGTCCCTGCACAGCCTGGGCCACCCTCCGGGCCCCAGCGCAGTGCCAGTGCCGGTGCCA
GGCGGAGGTGGAGCGGACCCACTGCAACACCACCATGGCCTGCAGGACTCCATCCTCAAC
CCCATGTCAGCCAACCTCGTGGACCTGGGCTCC

ORF Protein

Cloned ORF protein sequence for pF1KB8939 Download

>KIBB8939  291 aa
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLSPPPPGL
PSLHSLGHPPGPSAVPVPVPGGGGADPLQHHHGLQDSILNPMSANLVDLGS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8939 Download

>pF1KB8939  3986 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCATGCTG
CCCACCTTCGGCTTCACGCAGGAGCAAGTGGCGTGCGTGTGCGAGGTGCTGCAGCAGGGC
GGCAACATCGAGCGGCTGGGCCGCTTCCTGTGGTCGCTGCCCGCCTGCGAGCACCTTCAC
AAGAATGAAAGCGTGCTCAAGGCCAAGGCCGTGGTGGCCTTCCACCGCGGCAACTTCCGC
GAGCTCTACAAGATCCTGGAGAGCCACCAGTTCTCGCCGCACAACCACGCCAAGCTGCAG
CAGCTGTGGCTCAAGGCACACTACATCGAGGCGGAGAAGCTGCGCGGCCGACCCCTGGGC
GCCGTGGGCAAATACCGCGTGCGCCGCAAATTCCCGCTGCCGCGCTCCATCTGGGACGGC
GAGGAGACCAGCTACTGCTTCAAGGAAAAGAGTCGCAGCGTGCTGCGCGAGTGGTACGCG
CACAACCCCTACCCTTCACCCCGCGAGAAGCGTGAGCTGGCGGAGGCCACGGGCCTCACC
ACCACACAGGTCAGCAACTGGTTCAAGAACCGGCGGCAGCGCGACCGGGCGGCCGAGGCC
AAGGAAAGGGAGAACAACGAGAACTCCAATTCTAACAGCCACAACCCGCTGAATGGCAGC
GGCAAGTCGGTGTTAGGCAGCTCGGAGGATGAGAAGACTCCATCGGGGACGCCAGACCAC
TCATCATCCAGCCCCGCACTGCTCCTCAGCCCGCCGCCCCCTGGGCTGCCGTCCCTGCAC
AGCCTGGGCCACCCTCCGGGCCCCAGCGCAGTGCCAGTGCCGGTGCCAGGCGGAGGTGGA
GCGGACCCACTGCAACACCACCATGGCCTGCAGGACTCCATCCTCAACCCCATGTCAGCC
AACCTCGTGGACCTGGGCTCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT