PACSIN2 ORF clone FXC06261

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Flexi ORF Clone FXC06261

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Clone info.

Species

human

Clone Name

pF1KB8651 Sequence (with vector) Restriction Map

Product ID

FXC06261

HaloTag Clone PID

FHC06261

ORF Sequence

DNA sequence (1458 bp)
Protein sequence (486 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB587486]

Gene

KIBB8651

Symbol

PACSIN2

Alias : SDPII

Description

protein kinase C and casein kinase substrate in neurons 2, transcript variant 2

Original Clone ID

oc00308

Features of the cloned ORF sequence

Description

Length: 1458 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 486 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS43023.1 2.3e-109 100.0 PACSIN2 CCDS54536.1 7.7e-77 91.6 PACSIN2 CCDS4793.1 4.3e-54 64.1 PACSIN1 CCDS31481.1 3.3e-44 51.8 PACSIN3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001452 429 439 PR00452 Src homology-3 domain IPR001452 443 458 PR00452 Src homology-3 domain IPR001452 473 485 PR00452 Src homology-3 domain HMMPfam IPR001060 16 103 PF00611 Fps/Fes/Fer/CIP4 homology IPR001452 432 479 PF00018 Src homology-3 domain HMMSmart IPR001060 16 104 SM00055 Fps/Fes/Fer/CIP4 homology IPR001452 429 486 SM00326 Src homology-3 domain ProfileScan IPR001060 11 75 PS50133 Fps/Fes/Fer/CIP4 homology IPR001452 426 486 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001171899 486 604960 100.0 100.0 NP_009160 486 604960 100.0 100.0 XP_016884053 486 604960 100.0 100.0 XP_011528151 488 604960 99.6 100.0 XP_011528153 488 604960 99.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8651 Download

>KIBB8651  1458 bp
ATGTCTGTCACATATGATGATTCCGTTGGAGTAGAAGTGTCCAGCGACAGCTTCTGGGAG
GTCGGGAACTACAAGCGGACTGTGAAGCGGATCGACGATGGCCACCGCCTGTGCAGCGAC
CTCATGAACTGCCTGCATGAGCGGGCGCGCATCGAGAAGGCGTATGCGCAGCAGCTCACT
GAGTGGGCCCGGCGCTGGAGGCAGCTCGTGGAGAAAGGGCCCCAGTACGGGACCGTGGAG
AAGGCCTGGATGGCCTTCATGTCCGAGGCAGAGAGGGTGAGCGAGCTGCACCTCGAGGTG
AAGGCCTCACTGATGAACGATGACTTCGAGAAGATCAAGAACTGGCAGAAGGAAGCCTTT
CACAAGCAGATGATGGGCGGCTTCAAGGAGACCAAGGAAGCTGAGGACGGCTTTCGGAAG
GCACAGAAGCCCTGGGCCAAGAAGCTGAAAGAGGTAGAAGCAGCAAAGAAAGCCCACCAT
GCAGCGTGCAAAGAGGAGAAGCTGGCTATCTCACGAGAAGCCAACAGCAAGGCAGACCCA
TCCCTCAACCCTGAACAGCTCAAGAAATTGCAAGACAAAATAGAAAAGTGCAAGCAAGAT
GTTCTTAAGACCAAAGAGAAGTATGAGAAGTCCCTGAAGGAACTCGACCAGGGCACACCC
CAGTACATGGAGAACATGGAGCAGGTGTTTGAGCAGTGCCAGCAGTTCGAGGAGAAACGC
CTTCGCTTCTTCCGGGAGGTTCTGCTGGAGGTTCAGAAGCACCTAGACCTGTCCAATGTG
GCTGGCTACAAAGCCATTTACCATGACCTGGAGCAGAGCATCAGAGCAGCTGATGCAGTG
GAGGACCTGAGGTGGTTCCGAGCCAATCACGGGCCGGGCATGGCCATGAACTGGCCGCAG
TTTGAGGAGTGGTCCGCAGACCTGAATCGAACCCTCAGCCGGAGAGAGAAGAAGAAGGCC
ACTGACGGCGTCACCCTGACGGGCATCAACCAGACAGGCGACCAGTCTCTGCCGAGTAAG
CCCAGCAGCACCCTTAATGTCCCGAGCAACCCCGCCCAGTCTGCGCAGTCACAGTCCAGC
TACAACCCCTTCGAGGATGAGGACGACACGGGCAGCACCGTCAGTGAGAAGGACGACACT
AAGGCCAAAAATGTGAGCAGCTACGAGAAGACCCAGAGCTATCCCACCGACTGGTCAGAC
GATGAGTCTAACAACCCCTTCTCCTCCACGGATGCCAATGGGGACTCGAATCCATTCGAC
GACGACGCCACCTCGGGGACGGAAGTGCGAGTCCGGGCCCTGTATGACTATGAGGGGCAG
GAGCATGATGAGCTGAGCTTCAAGGCTGGGGATGAGCTGACCAAGATGGAGGACGAGGAT
GAGCAGGGCTGGTGCAAGGGACGCTTGGACAACGGGCAAGTTGGCCTATACCCGGCAAAT
TATGTGGAGGCGATCCAG

ORF Protein

Cloned ORF protein sequence for pF1KB8651 Download

>KIBB8651  486 aa
MSVTYDDSVGVEVSSDSFWEVGNYKRTVKRIDDGHRLCSDLMNCLHERARIEKAYAQQLT
EWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAF
HKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREANSKADP
SLNPEQLKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKR
LRFFREVLLEVQKHLDLSNVAGYKAIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQ
FEEWSADLNRTLSRREKKKATDGVTLTGINQTGDQSLPSKPSSTLNVPSNPAQSAQSQSS
YNPFEDEDDTGSTVSEKDDTKAKNVSSYEKTQSYPTDWSDDESNNPFSSTDANGDSNPFD
DDATSGTEVRVRALYDYEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPAN
YVEAIQ

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8651 Download

>pF1KB8651  4571 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCTGTCACA
TATGATGATTCCGTTGGAGTAGAAGTGTCCAGCGACAGCTTCTGGGAGGTCGGGAACTAC
AAGCGGACTGTGAAGCGGATCGACGATGGCCACCGCCTGTGCAGCGACCTCATGAACTGC
CTGCATGAGCGGGCGCGCATCGAGAAGGCGTATGCGCAGCAGCTCACTGAGTGGGCCCGG
CGCTGGAGGCAGCTCGTGGAGAAAGGGCCCCAGTACGGGACCGTGGAGAAGGCCTGGATG
GCCTTCATGTCCGAGGCAGAGAGGGTGAGCGAGCTGCACCTCGAGGTGAAGGCCTCACTG
ATGAACGATGACTTCGAGAAGATCAAGAACTGGCAGAAGGAAGCCTTTCACAAGCAGATG
ATGGGCGGCTTCAAGGAGACCAAGGAAGCTGAGGACGGCTTTCGGAAGGCACAGAAGCCC
TGGGCCAAGAAGCTGAAAGAGGTAGAAGCAGCAAAGAAAGCCCACCATGCAGCGTGCAAA
GAGGAGAAGCTGGCTATCTCACGAGAAGCCAACAGCAAGGCAGACCCATCCCTCAACCCT
GAACAGCTCAAGAAATTGCAAGACAAAATAGAAAAGTGCAAGCAAGATGTTCTTAAGACC
AAAGAGAAGTATGAGAAGTCCCTGAAGGAACTCGACCAGGGCACACCCCAGTACATGGAG
AACATGGAGCAGGTGTTTGAGCAGTGCCAGCAGTTCGAGGAGAAACGCCTTCGCTTCTTC
CGGGAGGTTCTGCTGGAGGTTCAGAAGCACCTAGACCTGTCCAATGTGGCTGGCTACAAA
GCCATTTACCATGACCTGGAGCAGAGCATCAGAGCAGCTGATGCAGTGGAGGACCTGAGG
TGGTTCCGAGCCAATCACGGGCCGGGCATGGCCATGAACTGGCCGCAGTTTGAGGAGTGG
TCCGCAGACCTGAATCGAACCCTCAGCCGGAGAGAGAAGAAGAAGGCCACTGACGGCGTC
ACCCTGACGGGCATCAACCAGACAGGCGACCAGTCTCTGCCGAGTAAGCCCAGCAGCACC
CTTAATGTCCCGAGCAACCCCGCCCAGTCTGCGCAGTCACAGTCCAGCTACAACCCCTTC
GAGGATGAGGACGACACGGGCAGCACCGTCAGTGAGAAGGACGACACTAAGGCCAAAAAT
GTGAGCAGCTACGAGAAGACCCAGAGCTATCCCACCGACTGGTCAGACGATGAGTCTAAC
AACCCCTTCTCCTCCACGGATGCCAATGGGGACTCGAATCCATTCGACGACGACGCCACC
TCGGGGACGGAAGTGCGAGTCCGGGCCCTGTATGACTATGAGGGGCAGGAGCATGATGAG
CTGAGCTTCAAGGCTGGGGATGAGCTGACCAAGATGGAGGACGAGGATGAGCAGGGCTGG
TGCAAGGGACGCTTGGACAACGGGCAAGTTGGCCTATACCCGGCAAATTATGTGGAGGCG
ATCCAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT