OTOP2 ORF clone FXC06247

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC06247

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Clone info.

Species

human

Clone Name

pF1KE0371 Sequence (with vector) Restriction Map

Product ID

FXC06247

HaloTag Clone PID

FHC06247

ORF Sequence

DNA sequence (1686 bp)
Protein sequence (562 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527196]

Gene

KIEE0371

Symbol

OTOP2

Description

otopetrin 2

Original Clone ID

oc01071

Features of the cloned ORF sequence

Description

Length: 1686 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 562 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11708.1 0 100.0 OTOP2 CCDS3372.1 1.5e-50 34.2 OTOP1 CCDS11709.1 6.7e-30 43.0 OTOP3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004878 102 219 PF03189 Otopetrin IPR004878 230 439 PF03189 Otopetrin IPR004878 484 548 PF03189 Otopetrin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 28 GRLLSVLLAVNVLLLACTLISGG 50 PRIMARY 23 2 58 YDTDVFALLTAMMLLATLWILFY 80 PRIMARY 23 3 101 IWLRGGLVLFGICTLIMDVFKTG 123 PRIMARY 23 4 134 AIKILHPLIQAVFVIIQTYFLWV 156 PRIMARY 23 5 165 HLDLTWCGLMFTLTTNLAIWMAA 187 SECONDARY 23 6 226 CLCSTAVCQIFQQGYFYLYPFNI 248 SECONDARY 23 7 291 AGPVLGLLLFVVGLAVFIIYEVQ 313 PRIMARY 23 8 325 LVIYYSFNIVCLGLTTLVSLSGS 347 SECONDARY 23 9 369 VALLMGAALGQYAISYYSIVAVV 391 SECONDARY 23 10 493 LKDISLFLLLCNVILWIMPAFGA 515 PRIMARY 23 11 526 DFYGYSLWAVIVNICLPFGIFYR 548 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_835454 562 607827 100.0 100.0 XP_011523781 562 607827 100.0 100.0 NP_819056 612 607806 34.2 97.7 XP_011523046 567 607828 43.0 95.4 NP_001258934 578 607828 43.0 95.4 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0371 Download

>KIEE0371  1686 bp
ATGTCCGAGGAGCTGGCCCAGGGCCCCAAGGAGAGCCCCCCGGCGCCGCGTGCGGGCCCC
AGGGAGGTGTGGAAGAAGGGTGGCCGCCTGCTGTCGGTGCTGCTGGCGGTGAACGTGCTG
CTCCTCGCCTGCACGCTCATCAGCGGCGGAGCCTTCAACAAGGTGGCCGTGTACGACACC
GACGTGTTCGCGCTGCTCACTGCGATGATGCTGCTGGCAACGCTCTGGATCCTCTTCTAC
CTCCTCCGAACCGTGCGCTGCCCCTGCGCGGTACCCTACCGGGACGCGCACGCTGGCCCC
ATCTGGCTCCGAGGTGGGCTGGTGCTGTTTGGAATCTGCACCCTCATCATGGATGTCTTC
AAGACCGGCTACTACTCCAGTTTCTTTGAGTGCCAGTCAGCCATCAAGATCCTGCACCCC
CTCATCCAGGCTGTGTTTGTCATCATCCAGACCTACTTTCTCTGGGTCTCTGCTAAAGAC
TGCGTTCACGTCCACCTGGATCTGACCTGGTGTGGTCTCATGTTCACACTCACCACCAAC
CTGGCCATCTGGATGGCGGCCGTGGTGGATGAATCTGTGCACCAATCCCACTCCTACAGC
AGTTCTCACAGCAACGCCAGCCACGCCCGTCTCATCTCTGACCAGCATGCAGACAACCCG
GTCGGAGGAGACTCCTGCCTCTGCAGCACGGCCGTCTGCCAGATCTTCCAGCAGGGGTAC
TTCTACCTATATCCCTTCAACATCGAGTACAGCCTCTTCGCCTCCACCATGCTGTATGTC
ATGTGGAAGAATGTGGGTAGATTCCTGGCCTCCACCCCTGGCCACAGCCACACCCCAACC
CCTGTCAGCCTCTTCCGGGAGACCTTTTTTGCTGGCCCGGTTCTGGGCCTGCTGCTCTTC
GTGGTGGGGCTGGCTGTCTTCATCATCTACGAGGTTCAAGTGAGCGGGGACGGGAGCCGC
ACCAGGCAGGCCCTGGTCATCTACTACAGCTTCAACATTGTCTGCTTGGGACTCACCACC
TTGGTCAGCCTGAGCGGCTCCATCATCTACCGTTTTGACCGCCGGGCCATGGACCACCAT
AAGAACCCCACGCGCACTCTGGACGTGGCCCTGCTGATGGGTGCCGCCCTGGGTCAGTAC
GCCATCTCTTACTACTCCATCGTGGCTGTGGTGGCGGGCACACCCCAGGACCTGCTGGCA
GGGCTCAACCTCACCCATGCACTGCTCATGATCGCCCAGCACACCTTCCAGAACATGTTT
ATCATCGAGAGCCTTCACCGAGGACCGCCCGGGGCTGAGCCTCACAGTACCCACCCCAAG
GAGCCCTGCCAAGACCTCACCTTCACCAACCTGGATGCCCTCCACACGTTGTCCGCCTGC
CCACCCAACCCCGGGCTGGTTAGCCCCAGCCCTTCAGACCAGCGGGAAGCAGTGGCCATC
GTCTCAACCCCCAGAAGCCAGTGGAGACGCCAGTGCCTAAAAGACATTTCTCTGTTTCTC
CTACTCTGCAATGTCATTCTGTGGATCATGCCTGCCTTCGGGGCCCGCCCTCATTTCAGC
AACACAGTGGAGGTGGATTTCTACGGCTACTCCCTCTGGGCGGTCATCGTCAACATCTGC
CTCCCTTTCGGCATCTTCTACCGCATGCACGCTGTGTCCAGCCTGCTGGAGGTCTACGTG
CTGTCC

ORF Protein

Cloned ORF protein sequence for pF1KE0371 Download

>KIEE0371  562 aa
MSEELAQGPKESPPAPRAGPREVWKKGGRLLSVLLAVNVLLLACTLISGGAFNKVAVYDT
DVFALLTAMMLLATLWILFYLLRTVRCPCAVPYRDAHAGPIWLRGGLVLFGICTLIMDVF
KTGYYSSFFECQSAIKILHPLIQAVFVIIQTYFLWVSAKDCVHVHLDLTWCGLMFTLTTN
LAIWMAAVVDESVHQSHSYSSSHSNASHARLISDQHADNPVGGDSCLCSTAVCQIFQQGY
FYLYPFNIEYSLFASTMLYVMWKNVGRFLASTPGHSHTPTPVSLFRETFFAGPVLGLLLF
VVGLAVFIIYEVQVSGDGSRTRQALVIYYSFNIVCLGLTTLVSLSGSIIYRFDRRAMDHH
KNPTRTLDVALLMGAALGQYAISYYSIVAVVAGTPQDLLAGLNLTHALLMIAQHTFQNMF
IIESLHRGPPGAEPHSTHPKEPCQDLTFTNLDALHTLSACPPNPGLVSPSPSDQREAVAI
VSTPRSQWRRQCLKDISLFLLLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAVIVNIC
LPFGIFYRMHAVSSLLEVYVLS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0371 Download

>pF1KE0371  4799 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTCCGAGGAG
CTGGCCCAGGGCCCCAAGGAGAGCCCCCCGGCGCCGCGTGCGGGCCCCAGGGAGGTGTGG
AAGAAGGGTGGCCGCCTGCTGTCGGTGCTGCTGGCGGTGAACGTGCTGCTCCTCGCCTGC
ACGCTCATCAGCGGCGGAGCCTTCAACAAGGTGGCCGTGTACGACACCGACGTGTTCGCG
CTGCTCACTGCGATGATGCTGCTGGCAACGCTCTGGATCCTCTTCTACCTCCTCCGAACC
GTGCGCTGCCCCTGCGCGGTACCCTACCGGGACGCGCACGCTGGCCCCATCTGGCTCCGA
GGTGGGCTGGTGCTGTTTGGAATCTGCACCCTCATCATGGATGTCTTCAAGACCGGCTAC
TACTCCAGTTTCTTTGAGTGCCAGTCAGCCATCAAGATCCTGCACCCCCTCATCCAGGCT
GTGTTTGTCATCATCCAGACCTACTTTCTCTGGGTCTCTGCTAAAGACTGCGTTCACGTC
CACCTGGATCTGACCTGGTGTGGTCTCATGTTCACACTCACCACCAACCTGGCCATCTGG
ATGGCGGCCGTGGTGGATGAATCTGTGCACCAATCCCACTCCTACAGCAGTTCTCACAGC
AACGCCAGCCACGCCCGTCTCATCTCTGACCAGCATGCAGACAACCCGGTCGGAGGAGAC
TCCTGCCTCTGCAGCACGGCCGTCTGCCAGATCTTCCAGCAGGGGTACTTCTACCTATAT
CCCTTCAACATCGAGTACAGCCTCTTCGCCTCCACCATGCTGTATGTCATGTGGAAGAAT
GTGGGTAGATTCCTGGCCTCCACCCCTGGCCACAGCCACACCCCAACCCCTGTCAGCCTC
TTCCGGGAGACCTTTTTTGCTGGCCCGGTTCTGGGCCTGCTGCTCTTCGTGGTGGGGCTG
GCTGTCTTCATCATCTACGAGGTTCAAGTGAGCGGGGACGGGAGCCGCACCAGGCAGGCC
CTGGTCATCTACTACAGCTTCAACATTGTCTGCTTGGGACTCACCACCTTGGTCAGCCTG
AGCGGCTCCATCATCTACCGTTTTGACCGCCGGGCCATGGACCACCATAAGAACCCCACG
CGCACTCTGGACGTGGCCCTGCTGATGGGTGCCGCCCTGGGTCAGTACGCCATCTCTTAC
TACTCCATCGTGGCTGTGGTGGCGGGCACACCCCAGGACCTGCTGGCAGGGCTCAACCTC
ACCCATGCACTGCTCATGATCGCCCAGCACACCTTCCAGAACATGTTTATCATCGAGAGC
CTTCACCGAGGACCGCCCGGGGCTGAGCCTCACAGTACCCACCCCAAGGAGCCCTGCCAA
GACCTCACCTTCACCAACCTGGATGCCCTCCACACGTTGTCCGCCTGCCCACCCAACCCC
GGGCTGGTTAGCCCCAGCCCTTCAGACCAGCGGGAAGCAGTGGCCATCGTCTCAACCCCC
AGAAGCCAGTGGAGACGCCAGTGCCTAAAAGACATTTCTCTGTTTCTCCTACTCTGCAAT
GTCATTCTGTGGATCATGCCTGCCTTCGGGGCCCGCCCTCATTTCAGCAACACAGTGGAG
GTGGATTTCTACGGCTACTCCCTCTGGGCGGTCATCGTCAACATCTGCCTCCCTTTCGGC
ATCTTCTACCGCATGCACGCTGTGTCCAGCCTGCTGGAGGTCTACGTGCTGTCCGTTTAA
ACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGA
TCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATA
ACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGG
AACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAG
CCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCA
GTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCG
CTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTG
CCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTC
TTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGG
TCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAG
AGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTC
CGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTG
AATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGC
GCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTG
CCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCT
GATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCG
AAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGAT
CTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGT
ATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATG
GTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGC
TATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCT
GACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTAT
CGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGA
CGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGA
TAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGC
CGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACG
CTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGG
AAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTT
TCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGT
GTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTG
CGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACT
GGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTT
CTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCT
GCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCAC
CGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATT
TCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACG
TTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTC
CGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAAT
GGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTAT
TCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCAT
TTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGG
GATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTC
CGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATC
AGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCC
ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTC
TCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAG
ACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATC
CGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCC
CGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTG
CGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT