TRMT2A ORF clone FXC05472

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Flexi ORF Clone FXC05472

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Clone info.

Species

human

Clone Name

pF1KE0342 Sequence (with vector) Restriction Map

Product ID

FXC05472

HaloTag Clone PID

FHC05472

ORF Sequence

DNA sequence (1875 bp)
Protein sequence (625 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527162]

Gene

KIEE0342

Symbol

TRMT2A

Alias : HTF9C

Description

tRNA methyltransferase 2 homolog A (S. cerevisiae), transcript variant 1

Original Clone ID

oc01042

Features of the cloned ORF sequence

Description

Length: 1875 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 625 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13774.1 0 100.0 TRMT2A CCDS58793.1 9.1e-199 100.0 TRMT2A CCDS82693.1 8.1e-164 97.2 TRMT2A CCDS14477.1 2.1e-52 37.3 TRMT2B CCDS55464.1 8e-46 42.9 TRMT2B The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR010280 401 588 PF05958 (Uracil-5)-methyltransferase ProfileScan IPR000504 73 146 PS50102 RNA recognition motif domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_892029 625 611151 100.0 100.0 NP_073564 625 611151 100.0 100.0 NP_001244923 562 611151 100.0 87.8 NP_001317968 643 611151 97.2 100.0 XP_011528441 643 611151 97.2 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0342 Download

>KIEE0342  1875 bp
ATGAGTGAGAACCTCGACAACGAGGGCCCGAAGCCCATGGAGAGCTGTGGCCAGGAGAGC
AGCAGTGCCCTGAGCTGCCCTACCGTCTCGGTGCCCCCTGCAGCCCCGGCAGCCCTGGAG
GAGGTGGAGAAAGAGGGCGCTGGGGCGGCTACAGGGCCGGGGCCTCAGCCCGGGCTCTAC
AGCTACATCAGGGATGACTTGTTTACCTCTGAGATCTTTAAACTGGAGCTGCAGAACGTG
CCTCGCCACGCCAGCTTCAGCGACGTCCGGCGCTTCCTGGGCCGCTTTGGTCTGCAGCCC
CACAAAACCAAACTCTTTGGGCAACCACCCTGCGCCTTTGTGACATTCCGCAGCGCTGCA
GAGAGGGACAAGGCCCTGCGCGTTTTGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGT
GTGCGCCTGGCCCGGCCCAAGGCCGACCCCATGGCCAGGAGGAGGCGACAGGAGGGTGAG
AGTGAGCCACCAGTAACACGAGTGGCCGACGTGGTGACCCCTCTATGGACAGTGCCCTAT
GCTGAGCAGCTTGAGCGGAAGCAGCTGGAGTGCGAGCAGGTGCTGCAGAAACTTGCCAAG
GAAATCGGGAGCACCAACCGTGCCTTGCTGCCCTGGCTGCTCGAGCAGAGGCACAAGCAC
AACAAGGCCTGCTGCCCGCTGGAGGGGGTCAGGCCATCACCCCAGCAGACTGAGTATCGT
AATAAGTGTGAGTTTCTGGTTGGCGTCGGGGTGGATGGGGAGGATAACACCGTGGGCTGT
CGGCTCGGCAAGTACAAGGGCGGGACGTGTGCTGTGGCAGCCCCGTTTGACACCGTGCAC
ATCCCCGAAGCCACCAAGCAGGTGGTGAAGGCCTTCCAGGAGTTCATCCGGTCCACTCCA
TACTCGGCATACGACCCAGAGACGTACACAGGCCACTGGAAGCAGCTGACTGTGCGCACC
AGCCGCCGCCACCAGGCCATGGCCATTGCCTACTTCCACCCCCAGAAGCTGAGCCCTGAG
GAGCTGGCAGAGCTGAAGACCTCCCTAGCGCAGCACTTCACAGCAGGGCCAGGCAGGGCC
AGTGGAGTGACCTGCCTCTACTTCGTGGAGGAGGGACAGCGAAAGACTCCTAGCCAGGAG
GGCCTGCCCCTGGAGCATGTGGCTGGGGACCGGTGCATCCACGAGGACCTGCTAGGGCTG
ACCTTCCGGATCTCTCCACACGCCTTCTTCCAGGTGAACACACCCGCAGCCGAGGTGCTC
TACACAGTCATCCAGGACTGGGCCCAATTGGATGCGGGGAGCATGGTGCTGGACGTGTGC
TGTGGCACCGGCACCATTGGCCTGGCCCTGGCCCGGAAGGTAAAGAGGGTCATTGGGGTC
GAGCTATGCCCAGAGGCTGTGGAGGACGCCCGGGTGAACGCCCAGGACAATGAGTTGAGT
AATGTGGAGTTCCACTGCGGGAGGGCCGAGGACCTGGTGCCCACCCTGGTGAGCAGACTG
GCCTCCCAGCACCTCGTGGCCATCCTGGACCCACCCCGTGCTGGCTTGCATTCCAAGGTG
ATCCTGGCCATCCGGAGAGCTAAGAACCTCAGGCGGCTGCTGTACGTCTCATGCAACCCC
CGGGCAGCCATGGGCAACTTTGTGGACCTCTGCAGAGCCCCATCTAACCGGGTGAAGGGC
ATTCCCTTCCGGCCGGTCAAGGCTGTGGCAGTGGACCTGTTCCCGCAGACCCCGCACTGT
GAGATGCTCATCCTGTTTGAGAGGGTGGAGCACCCCAATGGCACAGGGGTCTTGGGGCCC
CACAGCCCTCCAGCTCAACCCACACCAGGACCCCCAGATAACACCCTACAAGAAACTGGG
ACCTTCCCCTCATCC

ORF Protein

Cloned ORF protein sequence for pF1KE0342 Download

>KIEE0342  625 aa
MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
HSPPAQPTPGPPDNTLQETGTFPSS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0342 Download

>pF1KE0342  4988 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGAGTGAGAAC
CTCGACAACGAGGGCCCGAAGCCCATGGAGAGCTGTGGCCAGGAGAGCAGCAGTGCCCTG
AGCTGCCCTACCGTCTCGGTGCCCCCTGCAGCCCCGGCAGCCCTGGAGGAGGTGGAGAAA
GAGGGCGCTGGGGCGGCTACAGGGCCGGGGCCTCAGCCCGGGCTCTACAGCTACATCAGG
GATGACTTGTTTACCTCTGAGATCTTTAAACTGGAGCTGCAGAACGTGCCTCGCCACGCC
AGCTTCAGCGACGTCCGGCGCTTCCTGGGCCGCTTTGGTCTGCAGCCCCACAAAACCAAA
CTCTTTGGGCAACCACCCTGCGCCTTTGTGACATTCCGCAGCGCTGCAGAGAGGGACAAG
GCCCTGCGCGTTTTGCATGGTGCCCTCTGGAAAGGCCGCCCACTCAGTGTGCGCCTGGCC
CGGCCCAAGGCCGACCCCATGGCCAGGAGGAGGCGACAGGAGGGTGAGAGTGAGCCACCA
GTAACACGAGTGGCCGACGTGGTGACCCCTCTATGGACAGTGCCCTATGCTGAGCAGCTT
GAGCGGAAGCAGCTGGAGTGCGAGCAGGTGCTGCAGAAACTTGCCAAGGAAATCGGGAGC
ACCAACCGTGCCTTGCTGCCCTGGCTGCTCGAGCAGAGGCACAAGCACAACAAGGCCTGC
TGCCCGCTGGAGGGGGTCAGGCCATCACCCCAGCAGACTGAGTATCGTAATAAGTGTGAG
TTTCTGGTTGGCGTCGGGGTGGATGGGGAGGATAACACCGTGGGCTGTCGGCTCGGCAAG
TACAAGGGCGGGACGTGTGCTGTGGCAGCCCCGTTTGACACCGTGCACATCCCCGAAGCC
ACCAAGCAGGTGGTGAAGGCCTTCCAGGAGTTCATCCGGTCCACTCCATACTCGGCATAC
GACCCAGAGACGTACACAGGCCACTGGAAGCAGCTGACTGTGCGCACCAGCCGCCGCCAC
CAGGCCATGGCCATTGCCTACTTCCACCCCCAGAAGCTGAGCCCTGAGGAGCTGGCAGAG
CTGAAGACCTCCCTAGCGCAGCACTTCACAGCAGGGCCAGGCAGGGCCAGTGGAGTGACC
TGCCTCTACTTCGTGGAGGAGGGACAGCGAAAGACTCCTAGCCAGGAGGGCCTGCCCCTG
GAGCATGTGGCTGGGGACCGGTGCATCCACGAGGACCTGCTAGGGCTGACCTTCCGGATC
TCTCCACACGCCTTCTTCCAGGTGAACACACCCGCAGCCGAGGTGCTCTACACAGTCATC
CAGGACTGGGCCCAATTGGATGCGGGGAGCATGGTGCTGGACGTGTGCTGTGGCACCGGC
ACCATTGGCCTGGCCCTGGCCCGGAAGGTAAAGAGGGTCATTGGGGTCGAGCTATGCCCA
GAGGCTGTGGAGGACGCCCGGGTGAACGCCCAGGACAATGAGTTGAGTAATGTGGAGTTC
CACTGCGGGAGGGCCGAGGACCTGGTGCCCACCCTGGTGAGCAGACTGGCCTCCCAGCAC
CTCGTGGCCATCCTGGACCCACCCCGTGCTGGCTTGCATTCCAAGGTGATCCTGGCCATC
CGGAGAGCTAAGAACCTCAGGCGGCTGCTGTACGTCTCATGCAACCCCCGGGCAGCCATG
GGCAACTTTGTGGACCTCTGCAGAGCCCCATCTAACCGGGTGAAGGGCATTCCCTTCCGG
CCGGTCAAGGCTGTGGCAGTGGACCTGTTCCCGCAGACCCCGCACTGTGAGATGCTCATC
CTGTTTGAGAGGGTGGAGCACCCCAATGGCACAGGGGTCTTGGGGCCCCACAGCCCTCCA
GCTCAACCCACACCAGGACCCCCAGATAACACCCTACAAGAAACTGGGACCTTCCCCTCA
TCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT