HCLS1 ORF clone FXC05400

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Flexi ORF Clone FXC05400

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Clone info.

Species

human

Clone Name

pF1KB7742 Sequence (with vector) Restriction Map

Product ID

FXC05400

HaloTag Clone PID

FHC05400

ORF Sequence

DNA sequence (1458 bp)
Protein sequence (486 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463725]

Gene

KIBB7742

Symbol

HCLS1

Alias : CTTNL, HS1, lckBP1, p75

Description

hematopoietic cell-specific Lyn substrate 1, transcript variant 1

Original Clone ID

cs00242

Features of the cloned ORF sequence

Description

Length: 1458 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 486 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS3003.1 1.9e-91 99.6 HCLS1 CCDS77800.1 5.4e-65 92.0 HCLS1 CCDS8197.1 1.1e-27 44.3 CTTN CCDS53676.1 1.3e-27 43.6 CTTN CCDS41680.1 2.1e-27 41.0 CTTN The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000108 275 292 PR00499 Neutrophil cytosol factor 2 p67phox IPR001452 431 441 PR00452 Src homology-3 domain IPR000108 433 453 PR00499 Neutrophil cytosol factor 2 p67phox IPR001452 445 460 PR00452 Src homology-3 domain IPR000108 453 469 PR00499 Neutrophil cytosol factor 2 p67phox IPR001452 462 471 PR00452 Src homology-3 domain IPR000108 469 482 PR00499 Neutrophil cytosol factor 2 p67phox IPR001452 473 485 PR00452 Src homology-3 domain HMMPfam IPR003134 82 118 PF02218 Hs1/Cortactin IPR003134 119 155 PF02218 Hs1/Cortactin IPR003134 156 192 PF02218 Hs1/Cortactin IPR003134 193 213 PF02218 Hs1/Cortactin IPR001452 434 479 PF00018 Src homology-3 domain HMMSmart IPR001452 431 486 SM00326 Src homology-3 domain ProfileScan IPR003134 79 115 PS51090 Hs1/Cortactin IPR003134 116 152 PS51090 Hs1/Cortactin IPR003134 153 189 PS51090 Hs1/Cortactin IPR003134 190 212 PS51090 Hs1/Cortactin IPR001452 428 486 PS50002 Src homology-3 domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_005326 486 601306 99.8 100.0 NP_001278970 449 601306 92.2 100.0 XP_006718510 476 164765 45.6 99.6 NP_612632 513 164765 44.3 99.6 NP_001171669 634 164765 43.6 97.5 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7742 Download

>KIBB7742  1458 bp
ATGTGGAAGTCTGTAGTGGGCCATGATGTGTCTGTTTCCGTGGAGACCCAGGGTGATGAT
TGGGACACAGATCCTGACTTTGTGAATGACATCTCTGAAAAGGAGCAACGATGGGGAGCC
AAGACCATCGAGGGGTCTGGACGCACAGAACACATCAACATCCACCAGCTGAGGAACAAA
GTATCAGAGGAGCATGATGTTCTCAGGAAGAAAGAGATGGAGTCAGGGCCCAAAGCATCC
CATGGCTATGGAGGTCGGTTTGGAGTAGAAAGAGACCGAATGGACAAGAGTGCAGTGGGC
CATGAGTATGTTGCCGAGGTGGAGAAGCACTCTTCTCAGACGGATGCTGCCAAAGGCTTT
GGGGGCAAGTACGGAGTTGAGAGGGACAGGGCAGACAAGTCAGCAGTCGGCTTTGATTAT
AAAGGAGAAGTGGAGAAGCATACATCTCAGAAAGATTACTCTCGTGGCTTTGGTGGCCGG
TACGGGGTGGAGAAGGATAAATGGGACAAAGCAGCTCTGGGATATGACTACAAGGGAGAG
ACGGAGAAACACGAGTCCCAGAGAGATTATGCCAAGGGCTTTGGTGGCCAGTATGGAATC
CAGAAGGACCGAGTGGATAAGAGCGCTGTCGGCTTCAATGAAATGGAGGCCCCGACCACA
GCTTATAAGAAGACGACGCCCATAGAAGCCGCTTCTAGTGGTGCCCGTGGGCTGAAGGCG
AAATTTGAGTCCATGGCTGAGGAGAAGAGGAAGCGAGAGGAAGAGGAGAAGGCACAGCAG
GTGGCCAGGAGGCAACAGGAGCGAAAGGCTGTGACAAAGAGGAGCCCTGAGGCTCCACAG
CCAGTGATAGCTATGGAAGAGCCAGCAGTACCGGCCCCACTGCCCAAGAAAATCTCCTCA
GAGGCCTGGCCTCCAGTTGGGACTCCTCCATCATCAGAGTCTGAGCCTGTGAGAACCAGC
AGGGAACACCCAGTGCCCTTGCTGCCCATTAGGCAGACTCTCCCGGAGGACAATGAGGAG
CCCCCAGCTCTGCCCCCTAGGACTCTGGAAGGCCTCCAGGTGGAGGAAGAGCCAGTGTAC
GAAGCAGAGCCTGAGCCTGAGCCCGAGCCTGAGCCCGAGCCTGAGAATGACTATGAGGAC
GTTGAGGAGATGGACAGGCATGAGCAGGAGGATGAACCAGAGGGGGACTATGAGGAGGTG
CTCGAGCCTGAAGATTCTTCTTTTTCTTCTGCTCTGGCTGGATCATCAGGCTGCCCGGCT
GGGGCTGGGGCTGGGGCTGTGGCTCTGGGGATCTCAGCTGTGGCTCTATATGATTACCAA
GGAGAGGGAAGTGATGAGCTTTCCTTTGATCCGGACGACGTAATCACTGACATTGAGATG
GTGGACGAGGGCTGGTGGCGGGGACGTTGCCATGGCCACTTTGGACTCTTCCCTGCAAAT
TATGTCAAGCTTCTGGAG

ORF Protein

Cloned ORF protein sequence for pF1KB7742 Download

>KIBB7742  486 aa
MWKSVVGHDVSVSVETQGDDWDTDPDFVNDISEKEQRWGAKTIEGSGRTEHINIHQLRNK
VSEEHDVLRKKEMESGPKASHGYGGRFGVERDRMDKSAVGHEYVAEVEKHSSQTDAAKGF
GGKYGVERDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDKAALGYDYKGE
TEKHESQRDYAKGFGGQYGIQKDRVDKSAVGFNEMEAPTTAYKKTTPIEAASSGARGLKA
KFESMAEEKRKREEEEKAQQVARRQQERKAVTKRSPEAPQPVIAMEEPAVPAPLPKKISS
EAWPPVGTPPSSESEPVRTSREHPVPLLPIRQTLPEDNEEPPALPPRTLEGLQVEEEPVY
EAEPEPEPEPEPEPENDYEDVEEMDRHEQEDEPEGDYEEVLEPEDSSFSSALAGSSGCPA
GAGAGAVALGISAVALYDYQGEGSDELSFDPDDVITDIEMVDEGWWRGRCHGHFGLFPAN
YVKLLE

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7742 Download

>pF1KB7742  4571 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGTGGAAGTCT
GTAGTGGGCCATGATGTGTCTGTTTCCGTGGAGACCCAGGGTGATGATTGGGACACAGAT
CCTGACTTTGTGAATGACATCTCTGAAAAGGAGCAACGATGGGGAGCCAAGACCATCGAG
GGGTCTGGACGCACAGAACACATCAACATCCACCAGCTGAGGAACAAAGTATCAGAGGAG
CATGATGTTCTCAGGAAGAAAGAGATGGAGTCAGGGCCCAAAGCATCCCATGGCTATGGA
GGTCGGTTTGGAGTAGAAAGAGACCGAATGGACAAGAGTGCAGTGGGCCATGAGTATGTT
GCCGAGGTGGAGAAGCACTCTTCTCAGACGGATGCTGCCAAAGGCTTTGGGGGCAAGTAC
GGAGTTGAGAGGGACAGGGCAGACAAGTCAGCAGTCGGCTTTGATTATAAAGGAGAAGTG
GAGAAGCATACATCTCAGAAAGATTACTCTCGTGGCTTTGGTGGCCGGTACGGGGTGGAG
AAGGATAAATGGGACAAAGCAGCTCTGGGATATGACTACAAGGGAGAGACGGAGAAACAC
GAGTCCCAGAGAGATTATGCCAAGGGCTTTGGTGGCCAGTATGGAATCCAGAAGGACCGA
GTGGATAAGAGCGCTGTCGGCTTCAATGAAATGGAGGCCCCGACCACAGCTTATAAGAAG
ACGACGCCCATAGAAGCCGCTTCTAGTGGTGCCCGTGGGCTGAAGGCGAAATTTGAGTCC
ATGGCTGAGGAGAAGAGGAAGCGAGAGGAAGAGGAGAAGGCACAGCAGGTGGCCAGGAGG
CAACAGGAGCGAAAGGCTGTGACAAAGAGGAGCCCTGAGGCTCCACAGCCAGTGATAGCT
ATGGAAGAGCCAGCAGTACCGGCCCCACTGCCCAAGAAAATCTCCTCAGAGGCCTGGCCT
CCAGTTGGGACTCCTCCATCATCAGAGTCTGAGCCTGTGAGAACCAGCAGGGAACACCCA
GTGCCCTTGCTGCCCATTAGGCAGACTCTCCCGGAGGACAATGAGGAGCCCCCAGCTCTG
CCCCCTAGGACTCTGGAAGGCCTCCAGGTGGAGGAAGAGCCAGTGTACGAAGCAGAGCCT
GAGCCTGAGCCCGAGCCTGAGCCCGAGCCTGAGAATGACTATGAGGACGTTGAGGAGATG
GACAGGCATGAGCAGGAGGATGAACCAGAGGGGGACTATGAGGAGGTGCTCGAGCCTGAA
GATTCTTCTTTTTCTTCTGCTCTGGCTGGATCATCAGGCTGCCCGGCTGGGGCTGGGGCT
GGGGCTGTGGCTCTGGGGATCTCAGCTGTGGCTCTATATGATTACCAAGGAGAGGGAAGT
GATGAGCTTTCCTTTGATCCGGACGACGTAATCACTGACATTGAGATGGTGGACGAGGGC
TGGTGGCGGGGACGTTGCCATGGCCACTTTGGACTCTTCCCTGCAAATTATGTCAAGCTT
CTGGAGGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGG
CATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCAC
CGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTT
GCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTA
TCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGT
CCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTT
CTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCT
TCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAAC
TGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAG
ACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCC
GCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGAT
GCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTG
TCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACG
GGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTA
TTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTA
TCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTC
GACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTC
GATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGG
CTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTG
CCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGT
GTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGC
GGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGC
ATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGA
CCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCAC
AGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAA
CCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCA
CAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGC
GTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATA
CCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTA
TCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCA
GCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGA
CTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGG
TGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGG
TATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGG
CAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAG
AAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAA
CGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGAT
CCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAA
ACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGG
TTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTG
GTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGC
GTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAA
ACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGAT
ACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAG
CGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGG
TAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGG
CTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGA
GTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGC
GGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGG
ATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATG
TATCCGCTCAT