VAX2 ORF clone FXC03879

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Flexi ORF Clone FXC03879

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Clone info.

Species

human

Clone Name

pF1KB7590 Sequence (with vector) Restriction Map

Product ID

FXC03879

HaloTag Clone PID

FHC03879

ORF Sequence

DNA sequence (870 bp)
Protein sequence (290 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527952]

Gene

KIBB7590

Symbol

VAX2

Alias : DRES93

Description

ventral anterior homeobox 2

Original Clone ID

cs00090

Features of the cloned ORF sequence

Description

Length: 870 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 290 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS1911.1 6.5e-70 100.0 VAX2 CCDS44483.1 2.6e-23 57.6 VAX1 CCDS7597.1 9.2e-14 62.6 VAX1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR020479 124 135 PR00024 Homeobox IPR000047 131 140 PR00031 Helix-turn-helix motif IPR020479 139 149 PR00024 Homeobox IPR000047 140 156 PR00031 Helix-turn-helix motif IPR020479 149 158 PR00024 Homeobox HMMPfam IPR001356 103 159 PF00046 Homeobox HMMSmart IPR001356 102 164 SM00389 Homeobox ProfileScan IPR001356 100 160 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_036608 290 604295 100.0 100.0 NP_001980 407 142996 34.1 93.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7590 Download

>KIBB7590  870 bp
ATGGGCGATGGGGGCGCCGAGCGCGACCGGGGCCCCGCGCGCCGGGCGGAGTCTGGTGGC
GGCGGTGGGCGCTGCGGAGACCGCAGCGGAGCGGGGGACTTGCGAGCTGATGGCGGTGGC
CACAGCCCAACGGAGGTGGCCGGGACCTCAGCCTCCAGTCCCGCAGGCTCCAGGGAGAGT
GGAGCCGACAGCGACGGGCAGCCCGGGCCCGGCGAGGCAGACCACTGCCGCCGCATACTG
GTGCGAGATGCCAAAGGGACAATTCGGGAAATTGTCCTGCCTAAGGGCCTGGACCTGGAC
CGGCCCAAGCGGACACGTACATCCTTCACTGCCGAGCAGCTGTACCGCCTGGAGATGGAG
TTCCAGCGCTGCCAGTATGTGGTGGGCCGCGAGCGCACTGAGCTGGCCCGCCAGCTGAAC
CTCTCCGAGACCCAGGTGAAGGTCTGGTTCCAGAACCGCCGCACCAAGCAGAAGAAAGAC
CAGAGCAGAGACCTGGAGAAGCGGGCGTCCTCCTCAGCCTCCGAGGCCTTTGCCACCTCC
AACATTCTGCGGCTGCTGGAGCAGGGCCGGCTGCTCTCTGTGCCCAGGGCCCCTAGCCTC
CTGGCGCTGACCCCTAGCCTGCCAGGCCTACCTGCCAGCCACAGGGGCACCTCCTTAGGT
GACCCCAGGAACTCCTCCCCACGCCTCAACCCGCTGTCCTCGGCCTCAGCGTCCCCCCCA
CTGCCGCCCCCTCTGCCAGCTGTCTGCTTTTCCTCGGCCCCGCTCCTGGATCTGCCTGCC
GGCTACGAACTGGGTTCCTCGGCCTTCGAGCCATACAGCTGGCTAGAACGGAAAGTGGGC
AGCGCCAGCAGCTGCAAGAAAGCTAACACT

ORF Protein

Cloned ORF protein sequence for pF1KB7590 Download

>KIBB7590  290 aa
MGDGGAERDRGPARRAESGGGGGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRES
GADSDGQPGPGEADHCRRILVRDAKGTIREIVLPKGLDLDRPKRTRTSFTAEQLYRLEME
FQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKDQSRDLEKRASSSASEAFATS
NILRLLEQGRLLSVPRAPSLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPP
LPPPLPAVCFSSAPLLDLPAGYELGSSAFEPYSWLERKVGSASSCKKANT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7590 Download

>pF1KB7590  3983 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCGATGGG
GGCGCCGAGCGCGACCGGGGCCCCGCGCGCCGGGCGGAGTCTGGTGGCGGCGGTGGGCGC
TGCGGAGACCGCAGCGGAGCGGGGGACTTGCGAGCTGATGGCGGTGGCCACAGCCCAACG
GAGGTGGCCGGGACCTCAGCCTCCAGTCCCGCAGGCTCCAGGGAGAGTGGAGCCGACAGC
GACGGGCAGCCCGGGCCCGGCGAGGCAGACCACTGCCGCCGCATACTGGTGCGAGATGCC
AAAGGGACAATTCGGGAAATTGTCCTGCCTAAGGGCCTGGACCTGGACCGGCCCAAGCGG
ACACGTACATCCTTCACTGCCGAGCAGCTGTACCGCCTGGAGATGGAGTTCCAGCGCTGC
CAGTATGTGGTGGGCCGCGAGCGCACTGAGCTGGCCCGCCAGCTGAACCTCTCCGAGACC
CAGGTGAAGGTCTGGTTCCAGAACCGCCGCACCAAGCAGAAGAAAGACCAGAGCAGAGAC
CTGGAGAAGCGGGCGTCCTCCTCAGCCTCCGAGGCCTTTGCCACCTCCAACATTCTGCGG
CTGCTGGAGCAGGGCCGGCTGCTCTCTGTGCCCAGGGCCCCTAGCCTCCTGGCGCTGACC
CCTAGCCTGCCAGGCCTACCTGCCAGCCACAGGGGCACCTCCTTAGGTGACCCCAGGAAC
TCCTCCCCACGCCTCAACCCGCTGTCCTCGGCCTCAGCGTCCCCCCCACTGCCGCCCCCT
CTGCCAGCTGTCTGCTTTTCCTCGGCCCCGCTCCTGGATCTGCCTGCCGGCTACGAACTG
GGTTCCTCGGCCTTCGAGCCATACAGCTGGCTAGAACGGAAAGTGGGCAGCGCCAGCAGC
TGCAAGAAAGCTAACACTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAG
TCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTT
GGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTT
GAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGC
CCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGC
GTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTG
CGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCG
GCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCC
TGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGA
TCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCA
GGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATC
GGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTC
AAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGG
CTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGG
GACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCT
GCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCT
ACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAA
GCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAA
CTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGC
GATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGT
GGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCT
GAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCC
GATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGG
GGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAAT
ACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCA
AAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCC
TGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATA
AAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCC
GCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTC
ACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGA
ACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCC
GGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAG
GTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAG
GACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAG
CTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCA
GATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGA
CGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGAT
CTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGC
TGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCC
TGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCA
GTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCG
TTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAG
CCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCT
TTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCC
TGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCG
TAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAA
TAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGA
ACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGC
CCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGG
CCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATA
CATTCAAATATGTATCCGCTCAT