OTP ORF clone FXC03768

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KOP Flexi HaloTag ORF List search

Flexi ORF Clone FXC03768

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Clone info.

Species

human

Clone Name

pF1KB7988 Sequence (with vector) Restriction Map

Product ID

FXC03768

HaloTag Clone PID

FHC03768

ORF Sequence

DNA sequence (975 bp)
Protein sequence (325 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB527841]

Gene

KIBB7988

Symbol

OTP

Description

orthopedia homeobox

Original Clone ID

cs00488

Features of the cloned ORF sequence

Description

Length: 975 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 325 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS4039.1 3.7e-82 100.0 OTP CCDS14215.1 5.2e-11 35.4 ARX The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000047 133 142 PR00031 Helix-turn-helix motif IPR000047 142 158 PR00031 Helix-turn-helix motif HMMPfam IPR001356 105 161 PF00046 Homeobox IPR003654 302 321 PF03826 Paired-like homeodomain protein HMMSmart IPR001356 104 166 SM00389 Homeobox ProfileScan IPR001356 102 162 PS50071 Homeobox IPR003654 306 319 PS50803 Paired-like homeodomain protein
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115485 325 604529 100.0 100.0 NP_038463 346 601881,611038 34.3 95.7 NP_002644 314 119800,186550,602149 32.6 89.2 NP_000316 324 137600,180500,180550,601542,604229 31.2 92.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7988 Download

>KIBB7988  975 bp
ATGCTGTCTCATGCCGACCTCCTGGACGCCAGGCTAGGTATGAAAGATGCCGCCGAGCTT
CTGGGCCACCGGGAGGCGGTGAAGTGTAGGCTGGGCGTGGGGGGCTCCGACCCCGGGGGC
CATCCGGGGGACCTGGCGCCCAACTCTGACCCAGTGGAGGGAGCCACTCTGCTGCCCGGG
GAGGACATCACCACAGTGGGCTCTACTCCGGCCTCGCTGGCGGTGAGCGCCAAAGACCCG
GACAAGCAGCCCGGGCCCCAGGGCGGCCCGAACCCCAGCCAAGCCGGCCAGCAGCAGGGC
CAACAGAAGCAGAAGCGCCACCGGACGCGCTTCACCCCCGCACAGCTCAACGAGTTGGAG
AGGAGCTTCGCCAAGACTCACTACCCCGACATCTTTATGCGTGAGGAGCTGGCACTGCGT
ATCGGGCTGACCGAGTCCCGAGTGCAGGTCTGGTTCCAGAACCGACGCGCCAAGTGGAAG
AAGCGCAAGAAGACGACCAACGTGTTCCGTGCGCCCGGCACACTGCTGCCCACGCCAGGC
CTGCCTCAGTTCCCGTCGGCTGCCGCCGCCGCTGCCGCCGCCATGGGCGACAGCCTGTGC
TCTTTCCACGCCAACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCACAGCTG
CCTCTGCCGCCGGCGCTGGGCAGGCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTGCAGC
CTGGCGGCCGGTCCGCCGCCCAACTCCATGGGCCTGTCCAACAGCCTGGCGGGTTCCAAC
GGCGCGGGGCTGCAGTCGCACCTCTACCAGCCCGCCTTCCCCGGCATGGTGCCCGCCTCC
CTCCCCGGCCCCAGCAACGTCTCCGGTTCGCCCCAGCTCTGCAGCTCCCCGGACAGCAGC
GACGTGTGGCGGGGCACCAGCATCGCCTCCCTCCGCCGCAAGGCGCTAGAGCACACAGTC
TCTATGAGCTTCACT

ORF Protein

Cloned ORF protein sequence for pF1KB7988 Download

>KIBB7988  325 aa
MLSHADLLDARLGMKDAAELLGHREAVKCRLGVGGSDPGGHPGDLAPNSDPVEGATLLPG
EDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQQGQQKQKRHRTRFTPAQLNELE
RSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPG
LPQFPSAAAAAAAAMGDSLCSFHANDTRWAAAAMPGVSQLPLPPALGRQQAMAQSLSQCS
LAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPDSS
DVWRGTSIASLRRKALEHTVSMSFT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7988 Download

>pF1KB7988  4088 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCTGTCTCAT
GCCGACCTCCTGGACGCCAGGCTAGGTATGAAAGATGCCGCCGAGCTTCTGGGCCACCGG
GAGGCGGTGAAGTGTAGGCTGGGCGTGGGGGGCTCCGACCCCGGGGGCCATCCGGGGGAC
CTGGCGCCCAACTCTGACCCAGTGGAGGGAGCCACTCTGCTGCCCGGGGAGGACATCACC
ACAGTGGGCTCTACTCCGGCCTCGCTGGCGGTGAGCGCCAAAGACCCGGACAAGCAGCCC
GGGCCCCAGGGCGGCCCGAACCCCAGCCAAGCCGGCCAGCAGCAGGGCCAACAGAAGCAG
AAGCGCCACCGGACGCGCTTCACCCCCGCACAGCTCAACGAGTTGGAGAGGAGCTTCGCC
AAGACTCACTACCCCGACATCTTTATGCGTGAGGAGCTGGCACTGCGTATCGGGCTGACC
GAGTCCCGAGTGCAGGTCTGGTTCCAGAACCGACGCGCCAAGTGGAAGAAGCGCAAGAAG
ACGACCAACGTGTTCCGTGCGCCCGGCACACTGCTGCCCACGCCAGGCCTGCCTCAGTTC
CCGTCGGCTGCCGCCGCCGCTGCCGCCGCCATGGGCGACAGCCTGTGCTCTTTCCACGCC
AACGACACCCGCTGGGCGGCGGCCGCCATGCCTGGCGTGTCACAGCTGCCTCTGCCGCCG
GCGCTGGGCAGGCAGCAGGCCATGGCGCAGTCGCTGTCCCAGTGCAGCCTGGCGGCCGGT
CCGCCGCCCAACTCCATGGGCCTGTCCAACAGCCTGGCGGGTTCCAACGGCGCGGGGCTG
CAGTCGCACCTCTACCAGCCCGCCTTCCCCGGCATGGTGCCCGCCTCCCTCCCCGGCCCC
AGCAACGTCTCCGGTTCGCCCCAGCTCTGCAGCTCCCCGGACAGCAGCGACGTGTGGCGG
GGCACCAGCATCGCCTCCCTCCGCCGCAAGGCGCTAGAGCACACAGTCTCTATGAGCTTC
ACTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA
ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG
TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA
AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT
TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT
GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT
CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC
CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT
ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC
TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT
CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA
ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA
AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA
AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT
TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT