OR13H1 ORF clone FXC03540

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Flexi ORF Clone FXC03540

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Clone info.

Species

human

Clone Name

pF1KE0879 Sequence (with vector) Restriction Map

Product ID

FXC03540

HaloTag Clone PID

FHC03540

ORF Sequence

DNA sequence (924 bp)
Protein sequence (308 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB529233]

Gene

KIEE0879

Symbol

OR13H1

Alias : ORX1

Description

olfactory receptor, family 13, subfamily H, member 1

Original Clone ID

cp01279

Features of the cloned ORF sequence

Description

Length: 924 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 308 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35396.1 2e-80 100.0 OR13H1 CCDS35093.1 1.5e-36 47.1 OR13C9 CCDS35094.1 1.9e-36 47.4 OR13D1 CCDS35092.1 2.4e-36 46.5 OR13C2 CCDS35089.1 6.7e-36 45.5 OR13C3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 26 50 PR00237 GPCR IPR000276 59 80 PR00237 GPCR IPR000725 92 103 PR00245 Olfactory receptor IPR000276 104 126 PR00237 GPCR IPR000725 129 141 PR00245 Olfactory receptor IPR000725 175 191 PR00245 Olfactory receptor IPR000276 198 221 PR00237 GPCR IPR000725 235 244 PR00245 Olfactory receptor IPR000276 271 297 PR00237 GPCR IPR000725 282 293 PR00245 Olfactory receptor HMMPfam IPR000276 41 289 PF00001 GPCR ProfileScan IPR017452 41 289 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MAMDNVTAVFQFLLIGISN 19 SECONDARY 19 2 27 FFTLVLIIYLSTLLGNGFMIFLI 49 PRIMARY 23 3 103 VSLALATAECLLLAAMAYDRVVA 125 SECONDARY 23 4 139 PVCVCLVATSWGTSLVLTAMLIL 161 PRIMARY 23 5 201 TSIFTLLLPFGFVLLSYIRIAMA 223 PRIMARY 23 6 237 FTTCGSHLTVVTIFYGSAISMY 258 SECONDARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_011514321 317 608497 46.3 99.4 NP_036501 317 608497 46.3 99.4 XP_011514322 317 608497 46.3 99.4 NP_003691 308 608494 46.9 99.4 NP_009091 312 600578 44.3 98.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KE0879 Download

>KIEE0879  924 bp
ATGGCCATGGACAATGTCACAGCAGTGTTTCAGTTTCTCCTTATTGGCATTTCTAACTAT
CCTCAATGGAGAGACACGTTTTTCACATTAGTGCTGATAATTTACCTCAGCACATTGTTG
GGGAATGGATTTATGATCTTTCTTATTCACTTTGACCCCAACCTCCACACTCCAATCTAC
TTCTTCCTTAGTAACCTGTCTTTCTTAGACCTTTGTTATGGAACAGCTTCCATGCCCCAG
GCTTTGGTGCATTGTTTCTCTACCCATCCCTACCTCTCTTATCCCCGATGTTTGGCTCAA
ACGAGTGTCTCCTTGGCTTTGGCCACAGCAGAGTGCCTCCTACTGGCTGCCATGGCCTAT
GACCGTGTGGTTGCTATCAGCAATCCCCTGCGTTATTCAGTGGTTATGAATGGCCCAGTA
TGTGTCTGCTTGGTTGCTACCTCATGGGGGACATCACTTGTGCTCACTGCCATGCTCATC
CTATCCCTGAGGCTTCACTTCTGTGGGGCTAATGTCATCAACCATTTTGCCTGTGAGATT
CTCTCCCTCATTAAGCTGACCTGTTCTGATACCAGCCTCAATGAATTTATGATCCTCATC
ACCAGTATCTTCACCCTGCTGCTACCATTTGGGTTTGTTCTCCTCTCCTACATACGAATT
GCTATGGCTATCATAAGGATTCGCTCACTCCAGGGCAGGCTCAAGGCCTTTACCACATGT
GGCTCTCACCTGACCGTGGTGACAATCTTCTATGGGTCAGCCATCTCCATGTATATGAAA
ACTCAGTCCAAGTCCTACCCTGACCAGGACAAGTTTATCTCAGTGTTTTATGGAGCTTTG
ACACCCATGTTGAACCCCCTGATATATAGCCTGAGAAAAAAAGATGTTAAACGGGCAATA
AGGAAAGTTATGTTGAAAAGGACA

ORF Protein

Cloned ORF protein sequence for pF1KE0879 Download

>KIEE0879  308 aa
MAMDNVTAVFQFLLIGISNYPQWRDTFFTLVLIIYLSTLLGNGFMIFLIHFDPNLHTPIY
FFLSNLSFLDLCYGTASMPQALVHCFSTHPYLSYPRCLAQTSVSLALATAECLLLAAMAY
DRVVAISNPLRYSVVMNGPVCVCLVATSWGTSLVLTAMLILSLRLHFCGANVINHFACEI
LSLIKLTCSDTSLNEFMILITSIFTLLLPFGFVLLSYIRIAMAIIRIRSLQGRLKAFTTC
GSHLTVVTIFYGSAISMYMKTQSKSYPDQDKFISVFYGALTPMLNPLIYSLRKKDVKRAI
RKVMLKRT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KE0879 Download

>pF1KE0879  4037 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCCATGGAC
AATGTCACAGCAGTGTTTCAGTTTCTCCTTATTGGCATTTCTAACTATCCTCAATGGAGA
GACACGTTTTTCACATTAGTGCTGATAATTTACCTCAGCACATTGTTGGGGAATGGATTT
ATGATCTTTCTTATTCACTTTGACCCCAACCTCCACACTCCAATCTACTTCTTCCTTAGT
AACCTGTCTTTCTTAGACCTTTGTTATGGAACAGCTTCCATGCCCCAGGCTTTGGTGCAT
TGTTTCTCTACCCATCCCTACCTCTCTTATCCCCGATGTTTGGCTCAAACGAGTGTCTCC
TTGGCTTTGGCCACAGCAGAGTGCCTCCTACTGGCTGCCATGGCCTATGACCGTGTGGTT
GCTATCAGCAATCCCCTGCGTTATTCAGTGGTTATGAATGGCCCAGTATGTGTCTGCTTG
GTTGCTACCTCATGGGGGACATCACTTGTGCTCACTGCCATGCTCATCCTATCCCTGAGG
CTTCACTTCTGTGGGGCTAATGTCATCAACCATTTTGCCTGTGAGATTCTCTCCCTCATT
AAGCTGACCTGTTCTGATACCAGCCTCAATGAATTTATGATCCTCATCACCAGTATCTTC
ACCCTGCTGCTACCATTTGGGTTTGTTCTCCTCTCCTACATACGAATTGCTATGGCTATC
ATAAGGATTCGCTCACTCCAGGGCAGGCTCAAGGCCTTTACCACATGTGGCTCTCACCTG
ACCGTGGTGACAATCTTCTATGGGTCAGCCATCTCCATGTATATGAAAACTCAGTCCAAG
TCCTACCCTGACCAGGACAAGTTTATCTCAGTGTTTTATGGAGCTTTGACACCCATGTTG
AACCCCCTGATATATAGCCTGAGAAAAAAAGATGTTAAACGGGCAATAAGGAAAGTTATG
TTGAAAAGGACAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACC
TGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGC
TGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGG
TTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTC
TAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTC
CCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACT
GGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCG
TGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAA
GTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGAT
CAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCT
CCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGC
TCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACC
GACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCC
ACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGG
CTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAG
AAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGC
CCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGT
CTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTC
GCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCC
TGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGG
CTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAG
CTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCG
CAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCG
AAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTT
ATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGC
CAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGA
GCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATA
CCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTAC
CGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTG
TAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCC
CGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAG
ACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGT
AGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGT
ATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTG
ATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTAC
GCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCA
GTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCAC
CTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGAT
GGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACC
CTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTT
CGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAG
CGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCG
AGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAG
CCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGG
CAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGC
CGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAAC
GAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTC
TCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAG
GGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCC
TGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCA
AATATGTATCCGCTCAT