HOXD13 ORF clone FXC03260

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Flexi ORF Clone FXC03260

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Clone info.

Species

human

Clone Name

pF1KB9705 Sequence (with vector) Restriction Map

Product ID

FXC03260

HaloTag Clone PID

FHC03260

ORF Sequence

DNA sequence (1005 bp)
Protein sequence (335 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463753]

Gene

KIBB9705

Symbol

HOXD13

Alias : BDE, BDSD, HOX4I, SPD, SPD1

Description

homeobox D13

Original Clone ID

cp00288

Features of the cloned ORF sequence

Description

Length: 1005 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 335 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2264.2 1.9e-68 100.0 HOXD13 CCDS5412.1 1.6e-25 50.1 HOXA13 CCDS8865.1 9.7e-22 48.3 HOXC13 CCDS11536.1 5.1e-17 47.8 HOXB13 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR022067 78 167 PF12284 Hox protein A13 N-terminal IPR001356 269 325 PF00046 Homeobox HMMSmart IPR001356 268 330 SM00389 Homeobox ProfileScan IPR001356 266 326 PS50071 Homeobox
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_000513 388 140000,142959,176305 50.1 97.9 NP_059106 330 142976,614931 48.3 96.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB9705 Download

>KIBB9705  1005 bp
ATGGACGGGCTGCGGGCAGACGGCGGGGGCGCCGGTGGCGCCCCGGCCTCTTCCTCCTCC
TCATCGGTGGCGGCGGCGGCGGCGTCAGGCCAGTGCCGCGGCTTTCTCTCCGCGCCTGTG
TTCGCCGGGACGCATTCGGGGCGGGCGGCGGCGGCGGCAGCGGCGGCTGCGGCGGCGGCA
GCGGCAGCCTCCGGCTTTGCGTACCCCGGGACCTCTGAGCGCACGGGCTCTTCCTCGTCG
TCGTCCTCTTCTGCCGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCA
GCACCCACGCCTGCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTGGGCTACGGC
TACCACTTCGGCAACGGCTACTACAGCTGCCGTATGTCGCACGGCGTGGGCTTACAGCAG
AATGCGCTCAAGTCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTACATG
GACGTGTCAGGCCTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAG
GAGGTATCCTTCTACCAGGGCTATACGAGCCCTTACCAGCACGTGCCCGGCTATATCGAC
ATGGTGTCCACTTTCGGCTCCGGGGAGCCTCGGCACGAGGCCTACATCTCCATGGAGGGG
TACCAGTCCTGGACGCTGGCTAACGGGTGGAACAGCCAGGTGTACTGCACCAAGGACCAG
CCACAGGGGTCCCACTTTTGGAAATCTTCCTTTCCAGGGGATGTGGCTCTAAATCAGCCG
GACATGTGCGTCTACCGAAGAGGGAGGAAGAAGAGAGTGCCTTACACCAAACTGCAGCTT
AAAGAACTGGAGAACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGT
ATCTCGGCTGCTACGAACCTATCTGAGAGACAAGTGACCATTTGGTTTCAGAACCGAAGA
GTGAAGGACAAGAAAATTGTCTCCAAGCTCAAAGATACTGTCTCC

ORF Protein

Cloned ORF protein sequence for pF1KB9705 Download

>KIBB9705  335 aa
MDGLRADGGGAGGAPASSSSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAA
AAASGFAYPGTSERTGSSSSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPALGYG
YHFGNGYYSCRMSHGVGLQQNALKSSPHASLGGFPVEKYMDVSGLASSSVPANEVPARAK
EVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVYCTKDQ
PQGSHFWKSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRR
ISAATNLSERQVTIWFQNRRVKDKKIVSKLKDTVS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB9705 Download

>pF1KB9705  4118 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGACGGGCTG
CGGGCAGACGGCGGGGGCGCCGGTGGCGCCCCGGCCTCTTCCTCCTCCTCATCGGTGGCG
GCGGCGGCGGCGTCAGGCCAGTGCCGCGGCTTTCTCTCCGCGCCTGTGTTCGCCGGGACG
CATTCGGGGCGGGCGGCGGCGGCGGCAGCGGCGGCTGCGGCGGCGGCAGCGGCAGCCTCC
GGCTTTGCGTACCCCGGGACCTCTGAGCGCACGGGCTCTTCCTCGTCGTCGTCCTCTTCT
GCCGTTGTAGCGGCGCGCCCGGAGGCTCCCCCAGCCAAAGAGTGCCCAGCACCCACGCCT
GCAGCGGCCGCTGCAGCGCCCCCGAGCGCTCCAGCGCTGGGCTACGGCTACCACTTCGGC
AACGGCTACTACAGCTGCCGTATGTCGCACGGCGTGGGCTTACAGCAGAATGCGCTCAAG
TCATCGCCGCACGCCTCGCTGGGAGGCTTTCCCGTGGAGAAGTACATGGACGTGTCAGGC
CTGGCGAGCAGCAGCGTACCGGCCAACGAGGTGCCAGCGCGAGCCAAGGAGGTATCCTTC
TACCAGGGCTATACGAGCCCTTACCAGCACGTGCCCGGCTATATCGACATGGTGTCCACT
TTCGGCTCCGGGGAGCCTCGGCACGAGGCCTACATCTCCATGGAGGGGTACCAGTCCTGG
ACGCTGGCTAACGGGTGGAACAGCCAGGTGTACTGCACCAAGGACCAGCCACAGGGGTCC
CACTTTTGGAAATCTTCCTTTCCAGGGGATGTGGCTCTAAATCAGCCGGACATGTGCGTC
TACCGAAGAGGGAGGAAGAAGAGAGTGCCTTACACCAAACTGCAGCTTAAAGAACTGGAG
AACGAGTATGCCATTAACAAATTCATTAACAAGGACAAGCGGCGGCGTATCTCGGCTGCT
ACGAACCTATCTGAGAGACAAGTGACCATTTGGTTTCAGAACCGAAGAGTGAAGGACAAG
AAAATTGTCTCCAAGCTCAAAGATACTGTCTCCGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCA
CTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTG
AGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCA
TAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAA
CCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCC
TGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGC
GCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCT
GGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCG
TCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAG
GATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTA
CGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGG
AAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTT
TGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTT
TTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAG
ATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT