DDX47 ORF clone FXC02943

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Flexi ORF Clone FXC02943

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Clone info.

Species

human

Clone Name

pF1KB8694 Sequence (with vector) Restriction Map

Product ID

FXC02943

HaloTag Clone PID

FHC02943

ORF Sequence

DNA sequence (1365 bp)
Protein sequence (455 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB462951]

Gene

KIBB8694

Symbol

DDX47

Alias : E4-DBP, HQ0256, MSTP162, RRP3

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, transcript variant 1

Original Clone ID

oc00357

Features of the cloned ORF sequence

Description

Length: 1365 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 455 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8655.1 2.9e-186 99.8 DDX47 CCDS8656.1 5e-99 89.0 DDX47 CCDS12390.1 3.1e-74 44.4 DDX49 CCDS13416.1 8.2e-54 37.2 DDX27 CCDS8342.1 3.2e-44 33.9 DDX10 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011545 48 215 PF00270 DNA/RNA helicase IPR001650 282 358 PF00271 Helicase HMMSmart IPR014001 43 241 SM00487 DEAD-like helicase IPR001650 277 358 SM00490 Helicase ProfileScan IPR014014 24 52 PS51195 RNA helicase IPR014001 55 226 PS51192 DEAD-like helicase IPR001650 237 397 PS51194 Helicase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057439 455 615428 99.8 100.0 NP_957518 406 615428 89.0 100.0 NP_060365 796 616621 37.2 90.3 NP_004389 875 601235 33.9 89.7 NP_055555 411 268305,608546 31.9 81.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8694 Download

>KIBB8694  1365 bp
ATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAG
GAGGAAACTAAAACATTTAAAGACCTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGAC
CAGTTGGGATGGACAAAACCCACCAAGATTCAGATTGAAGCTATTCCTTTGGCCTTACAA
GGTCGTGATATCATTGGGCTTGCAGAAACTGGCCCTGGAAAGACAGGCGCCTTTGCTTTG
CCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCTAGTTCTTACCCCG
ACTCGGGAGCTGGCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCCTCTATTGGA
GTGCAGAGTGCTGTGATTGTAGGTGGAATTGATTCAATGTCTCAATCTTTGGCCCTTGCA
AAAAAACCACATATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATACG
AAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAATACTG
AATATGGATTTTGAGACAGAGGTTGACAAGATCCTCAAAGTGATTCCTCGAGATCGGAAA
ACATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTG
AAGAATCCTGTGAAATGTGCCGTTTCCTCTAAATACCAGACAGTTGAAAAATTACAGCAA
TATTATATTTTTATTCCCTCTAAATTCAAGGATACCTACCTGGTTTATATTCTAAATGAA
TTGGCTGGAAACTCCTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCT
TTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGAGT
AAGCGCCTAGGATCCCTTAATAAGTTTAAGGCCAAGGCCCGTTCCATTCTTCTAGCAACT
GACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATT
CCTACCCATTCCAAGGATTACATCCATCGAGTAGGTCGAACAGCTAGAGCTGGGCGCTCC
GGAAAGGCTATTACTTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACAC
TTAATTGGGAAGAAACTACCAGGTTTTCCAACACAGGATGATGAGGTTATGATGCTGACA
GAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAATGGAGTTAAGGGAGCATGGAGAAAAG
AAGAAACGCTCGCGAGAGGATGCTGGAGATAATGATGACACAGAGGGTGCTATTGGTGTC
AGGAACAAGGTGGCTGGAGGAAAAATGAAGAAGCGGAAAGGCCGT

ORF Protein

Cloned ORF protein sequence for pF1KB8694 Download

>KIBB8694  455 aa
MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ
GRDIIGLAETGPGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGSSIG
VQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL
NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQ
YYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQS
KRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRS
GKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEK
KKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8694 Download

>pF1KB8694  4478 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCACCC
GAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAGGAGGAAACTAAA
ACATTTAAAGACCTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGG
ACAAAACCCACCAAGATTCAGATTGAAGCTATTCCTTTGGCCTTACAAGGTCGTGATATC
ATTGGGCTTGCAGAAACTGGCCCTGGAAAGACAGGCGCCTTTGCTTTGCCCATTCTAAAC
GCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCTAGTTCTTACCCCGACTCGGGAGCTG
GCCTTTCAGATCTCAGAGCAGTTTGAAGCCCTGGGGTCCTCTATTGGAGTGCAGAGTGCT
GTGATTGTAGGTGGAATTGATTCAATGTCTCAATCTTTGGCCCTTGCAAAAAAACCACAT
ATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATACGAAAGGTTTCAAC
TTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAATACTGAATATGGATTTT
GAGACAGAGGTTGACAAGATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTC
TCTGCCACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTG
AAATGTGCCGTTTCCTCTAAATACCAGACAGTTGAAAAATTACAGCAATATTATATTTTT
ATTCCCTCTAAATTCAAGGATACCTACCTGGTTTATATTCTAAATGAATTGGCTGGAAAC
TCCTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCTTTGCTACTGCGA
AATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGAGTAAGCGCCTAGGA
TCCCTTAATAAGTTTAAGGCCAAGGCCCGTTCCATTCTTCTAGCAACTGACGTTGCCAGC
CGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACCCATTCC
AAGGATTACATCCATCGAGTAGGTCGAACAGCTAGAGCTGGGCGCTCCGGAAAGGCTATT
ACTTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGGGAAG
AAACTACCAGGTTTTCCAACACAGGATGATGAGGTTATGATGCTGACAGAACGCGTCGCT
GAAGCCCAAAGGTTTGCCCGAATGGAGTTAAGGGAGCATGGAGAAAAGAAGAAACGCTCG
CGAGAGGATGCTGGAGATAATGATGACACAGAGGGTGCTATTGGTGTCAGGAACAAGGTG
GCTGGAGGAAAAATGAAGAAGCGGAAAGGCCGTGTTTAAACGAATTCGAGCTCGGTACCC
GGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCG
AAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGC
CTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGC
TGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTT
TCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGG
TCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCG
CCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGT
AAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGG
CGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAA
GATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGG
GCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGC
CCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCA
GCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTC
ACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCA
TCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCAT
ACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCA
CGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGG
CTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTC
GTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCT
GGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCT
ACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTAC
GGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTC
TGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAG
GATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTC
GTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTT
TCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTT
GCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGAT
ACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGC
ACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAA
GTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGG
CTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAG
ATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAG
GTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAA
CGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTT
GTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACG
GTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTC
TGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGC
TGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGT
GGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCA
GGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTG
ATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTAC
TGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGT
AGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAT
AAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTC
AGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAA
CTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCT
GTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACG
TTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATC
AAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGT
TTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT