ZSCAN21 ORF clone FXC02732

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Flexi ORF Clone FXC02732

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Clone info.

Species

human

Clone Name

pF1KB8295 Sequence (with vector) Restriction Map

Product ID

FXC02732

HaloTag Clone PID

FHC02732

ORF Sequence

DNA sequence (1419 bp)
Protein sequence (473 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464370]

Gene

KIBB8295

Symbol

ZSCAN21

Alias : NY-REN-21, ZNF38, Zipro1

Description

zinc finger and SCAN domain containing 21

Original Clone ID

oc00071

Features of the cloned ORF sequence

Description

Length: 1419 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 473 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS5681.1 2.1e-120 100.0 ZSCAN21 CCDS42427.1 1.4e-46 46.2 ZSCAN30 CCDS78119.1 6.6e-37 43.4 ZSCAN26 CCDS4643.1 9.5e-37 42.1 ZNF165 CCDS14649.1 6.1e-31 40.2 ZNF449 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003309 40 133 PF02023 Transcription regulator SCAN IPR007087 277 299 PF00096 Zinc finger IPR007087 305 327 PF00096 Zinc finger IPR007087 360 382 PF00096 Zinc finger IPR007087 388 410 PF00096 Zinc finger IPR007087 416 438 PF00096 Zinc finger HMMSmart IPR003309 41 153 SM00431 Transcription regulator SCAN IPR015880 277 299 SM00355 Zinc finger IPR015880 305 327 SM00355 Zinc finger IPR015880 333 354 SM00355 Zinc finger IPR015880 360 382 SM00355 Zinc finger IPR015880 388 410 SM00355 Zinc finger IPR015880 416 438 SM00355 Zinc finger IPR015880 444 466 SM00355 Zinc finger ProfileScan IPR003309 45 127 PS50804 Transcription regulator SCAN IPR007087 277 304 PS50157 Zinc finger IPR007087 305 332 PS50157 Zinc finger IPR007087 333 359 PS50157 Zinc finger IPR007087 360 387 PS50157 Zinc finger IPR007087 388 415 PS50157 Zinc finger IPR007087 416 443 PS50157 Zinc finger IPR007087 444 471 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) XP_005250625 473 601261 100.0 100.0 NP_666019 473 601261 100.0 100.0 XP_006716176 473 601261 100.0 100.0 XP_016868073 473 601261 100.0 100.0 XP_016866753 478 616474 43.4 89.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB8295 Download

>KIBB8295  1419 bp
ATGATGACCAAGGTACTAGGCATGGCCCCAGTTCTGGGCCCTAGGCCTCCACAGGAGCAG
GTGGGGCCTCTGATGGTAAAAGTCGAGGAGAAAGAAGAGAAAGGCAAGTACCTTCCTAGC
CTGGAGATGTTCCGCCAGCGCTTCAGGCAGTTTGGGTACCATGATACCCCTGGACCCCGA
GAGGCCCTGAGCCAACTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCCGAGATCCACACC
AAGGAGCAGATCCTGGAGCTACTGGTGCTGGAGCAGTTCCTGACCATCCTGCCCCAGGAG
CTCCAGGCCTGGGTGCAGGAGCATTGCCCGGAGAGCGCTGAAGAGGCTGTCACTCTCCTC
GAAGATCTGGAGCGGGAACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAA
CAGAAACCGGTGTGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGC
ATGCAGCCACAGCCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATC
CAAGAGTCTGGTGAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGA
TTGAGTACCCAGCACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTC
AAAGGGGATATAATTTCTGTGATTATCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAG
TGCGTAAACCTTGAAAATGAAAAAGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAG
AAAGGTAGAGAATCAGTTCCTACTAAACCTACCCCAGGAGAGAGACGTTATATATGTGCT
GAATGTGGCAAAGCCTTTAGTAATAGCTCAAATCTCACCAAACACAGGAGAACACACACT
GGGGAGAAACCTTACGTGTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCAAACCTC
ACCCTCCACTACAGAACACACTTGGTGGACCGGCCCTATGACTGTAAGTGTGGAAAAGCT
TTTGGGCAGAGCTCAGACCTTCTTAAACATCAGAGAATGCACACAGAAGAGGCGCCATAT
CAGTGCAAAGATTGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCGG
ATCCACACTGGGGAGAAGCCTTATCAGTGTAACGAATGTGGGAAGAGCTTCAGTCAGCAT
GCGGGCCTCAGCTCCCACCAGAGACTCCACACCGGAGAGAAGCCATATAAGTGTAAGGAG
TGTGGGAAAGCCTTCAACCACAGCTCCAACTTCAATAAACACCACAGAATCCACACCGGG
GAAAAGCCCTACTGGTGTCATCACTGTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCC
AAACATCAGCGAGTCCACACTGGAGAGGGAGAAGCACCG

ORF Protein

Cloned ORF protein sequence for pF1KB8295 Download

>KIBB8295  473 aa
MMTKVLGMAPVLGPRPPQEQVGPLMVKVEEKEEKGKYLPSLEMFRQRFRQFGYHDTPGPR
EALSQLRVLCCEWLRPEIHTKEQILELLVLEQFLTILPQELQAWVQEHCPESAEEAVTLL
EDLERELDEPGHQVSTPPNEQKPVWEKISSSGTAKESPSSMQPQPLETSHKYESWGPLYI
QESGEEQEFAQDPRKVRDCRLSTQHEESADEQKGSEAEGLKGDIISVIIANKPEASLERQ
CVNLENEKGTKPPLQEAGSKKGRESVPTKPTPGERRYICAECGKAFSNSSNLTKHRRTHT
GEKPYVCTKCGKAFSHSSNLTLHYRTHLVDRPYDCKCGKAFGQSSDLLKHQRMHTEEAPY
QCKDCGKAFSGKGSLIRHYRIHTGEKPYQCNECGKSFSQHAGLSSHQRLHTGEKPYKCKE
CGKAFNHSSNFNKHHRIHTGEKPYWCHHCGKTFCSKSNLSKHQRVHTGEGEAP

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB8295 Download

>pF1KB8295  4532 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGACCAAG
GTACTAGGCATGGCCCCAGTTCTGGGCCCTAGGCCTCCACAGGAGCAGGTGGGGCCTCTG
ATGGTAAAAGTCGAGGAGAAAGAAGAGAAAGGCAAGTACCTTCCTAGCCTGGAGATGTTC
CGCCAGCGCTTCAGGCAGTTTGGGTACCATGATACCCCTGGACCCCGAGAGGCCCTGAGC
CAACTCCGGGTGCTCTGCTGTGAGTGGCTGAGGCCCGAGATCCACACCAAGGAGCAGATC
CTGGAGCTACTGGTGCTGGAGCAGTTCCTGACCATCCTGCCCCAGGAGCTCCAGGCCTGG
GTGCAGGAGCATTGCCCGGAGAGCGCTGAAGAGGCTGTCACTCTCCTCGAAGATCTGGAG
CGGGAACTGGATGAGCCAGGACACCAGGTCTCAACTCCTCCAAACGAACAGAAACCGGTG
TGGGAGAAGATATCCTCCTCAGGAACTGCAAAGGAATCCCCGAGCAGCATGCAGCCACAG
CCCTTGGAGACCAGTCACAAATACGAGTCTTGGGGGCCCCTGTACATCCAAGAGTCTGGT
GAGGAGCAGGAGTTCGCTCAAGATCCAAGAAAGGTCCGAGATTGCAGATTGAGTACCCAG
CACGAGGAATCAGCAGATGAGCAGAAAGGTTCTGAAGCAGAGGGGCTCAAAGGGGATATA
ATTTCTGTGATTATCGCCAATAAACCTGAGGCCAGCTTAGAGAGGCAGTGCGTAAACCTT
GAAAATGAAAAAGGAACAAAACCCCCTCTTCAAGAGGCAGGCTCCAAGAAAGGTAGAGAA
TCAGTTCCTACTAAACCTACCCCAGGAGAGAGACGTTATATATGTGCTGAATGTGGCAAA
GCCTTTAGTAATAGCTCAAATCTCACCAAACACAGGAGAACACACACTGGGGAGAAACCT
TACGTGTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCAAACCTCACCCTCCACTAC
AGAACACACTTGGTGGACCGGCCCTATGACTGTAAGTGTGGAAAAGCTTTTGGGCAGAGC
TCAGACCTTCTTAAACATCAGAGAATGCACACAGAAGAGGCGCCATATCAGTGCAAAGAT
TGTGGCAAGGCTTTCAGCGGGAAAGGCAGCCTCATTCGTCACTATCGGATCCACACTGGG
GAGAAGCCTTATCAGTGTAACGAATGTGGGAAGAGCTTCAGTCAGCATGCGGGCCTCAGC
TCCCACCAGAGACTCCACACCGGAGAGAAGCCATATAAGTGTAAGGAGTGTGGGAAAGCC
TTCAACCACAGCTCCAACTTCAATAAACACCACAGAATCCACACCGGGGAAAAGCCCTAC
TGGTGTCATCACTGTGGAAAGACCTTCTGTAGCAAGTCCAATCTTTCCAAACATCAGCGA
GTCCACACTGGAGAGGGAGAAGCACCGGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT