ZNF200 ORF clone FXC02550

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Flexi ORF Clone FXC02550

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Clone info.

Species

human

Clone Name

pF1KB7658 Sequence (with vector) Restriction Map

Product ID

FXC02550

HaloTag Clone PID

FHC02550

ORF Sequence

DNA sequence (1182 bp)
Protein sequence (394 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB464381]

Gene

KIBB7658

Symbol

ZNF200

Description

zinc finger protein 200, transcript variant 4

Original Clone ID

cs00158

Features of the cloned ORF sequence

Description

Length: 1182 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 394 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS45395.1 3.7e-99 100.0 ZNF200 CCDS10497.1 1.1e-98 99.7 ZNF200 CCDS42112.1 5.3e-98 99.5 ZNF200 CCDS10505.1 6.2e-19 36.1 ZNF597 CCDS12495.1 3.5e-18 49.7 ZNF567 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR007087 251 273 PF00096 Zinc finger IPR007087 279 301 PF00096 Zinc finger IPR007087 335 357 PF00096 Zinc finger HMMSmart IPR015880 251 273 SM00355 Zinc finger IPR015880 279 301 SM00355 Zinc finger IPR015880 307 329 SM00355 Zinc finger IPR015880 335 357 SM00355 Zinc finger IPR015880 363 385 SM00355 Zinc finger ProfileScan IPR007087 251 278 PS50157 Zinc finger IPR007087 279 306 PS50157 Zinc finger IPR007087 307 334 PS50157 Zinc finger IPR007087 335 362 PS50157 Zinc finger IPR007087 363 390 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001138920 394 603231 100.0 100.0 NP_001138919 394 603231 100.0 100.0 NP_001138918 394 603231 100.0 100.0 NP_932354 395 603231 99.7 100.0 XP_005255613 395 603231 99.7 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7658 Download

>KIBB7658  1182 bp
ATGATGGCTGCAAAAGTGGTTCCTATGCCCCCAAAGCCAAAGCAGTCCTTTATACTGAGA
GTTCCGCCAGACTCCAAGCTGGGCCAAGACCTACTTCGAGATGCCACTAACGGGCCCAAG
ACCATCCACCAGCTAGTGCTGGAGCACTTCCTCACCTTCTTGCCCAAGCCAAGCCTGGTC
CAGCCCAGTCAGAAAGTCAAGGAGACCTTGGTTATTATGAAAGATGTGAGCTCAAGCCTT
CAGAACAGAGTGCATCCTCGTCCCTTGGTGAAGCTTCTGCCCAAAGGAGTCCAAAAGGAA
CAAGAGACAGTGTCTCTGTATTTGAAAGCTAACCCTGAGGAGCTGGTGGTCTTTGAGGAT
TTGAATGTATTTCACTGCCAGGAAGAATGTGTGAGCTTGGATCCTACTCAACAACTCACG
TCAGAGAAGGAAGATGACAGCAGTGTCGGGGAAATGATGTTACTGGTCAATGGCAGTAAT
CCTGAAGGTGAAGATCCTGAGAGGGAACCTGTAGAAAATGAAGATTATAGAGAAAAGTCT
TCAGATGATGATGAAATGGATTCTTCCTTGGTCTCTCAGCAGCCTCCCGATAACCAGGAA
AAGGAACGACTAAATACATCCATTCCACAAAAAAGGAAAATGAGAAATCTGTTAGTTACC
ATTGAGAATGATACTCCTCTAGAGGAACTCTCAAAATATGTAGACATCAGTATTATTGCC
CTTACTCGAAATCGGAGGACAAGGAGATGGTACACTTGTCCACTGTGTGGGAAACAGTTT
AATGAAAGTTCTTACCTCATTTCCCACCAGAGGACCCACACTGGAGAAAAACCCTATGAC
TGTAATCACTGTGGGAAAAGCTTCAATCATAAAACAAACCTCAATAAACATGAGCGAATT
CATACAGGAGAGAAACCTTATTCCTGTTCTCAGTGTGGAAAAAACTTCCGTCAGAATTCT
CATCGGAGTCGTCATGAAGGAATCCATATAAGGGAGAAGATATTTAAGTGTCCAGAATGT
GGGAAAACCTTCCCAAAGAATGAGGAGTTTGTGCTTCATCTGCAGAGTCATGAGGCTGAG
AGACCATATGGTTGCAAAAAATGTGGGAGAAGATTTGGTCGGCTGTCAAACTGTACCCGG
CATGAGAAAACCCACTCAGCCTGTAAGACCCGAAAGCAGAAG

ORF Protein

Cloned ORF protein sequence for pF1KB7658 Download

>KIBB7658  394 aa
MMAAKVVPMPPKPKQSFILRVPPDSKLGQDLLRDATNGPKTIHQLVLEHFLTFLPKPSLV
QPSQKVKETLVIMKDVSSSLQNRVHPRPLVKLLPKGVQKEQETVSLYLKANPEELVVFED
LNVFHCQEECVSLDPTQQLTSEKEDDSSVGEMMLLVNGSNPEGEDPEREPVENEDYREKS
SDDDEMDSSLVSQQPPDNQEKERLNTSIPQKRKMRNLLVTIENDTPLEELSKYVDISIIA
LTRNRRTRRWYTCPLCGKQFNESSYLISHQRTHTGEKPYDCNHCGKSFNHKTNLNKHERI
HTGEKPYSCSQCGKNFRQNSHRSRHEGIHIREKIFKCPECGKTFPKNEEFVLHLQSHEAE
RPYGCKKCGRRFGRLSNCTRHEKTHSACKTRKQK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7658 Download

>pF1KB7658  4295 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGATGGCTGCA
AAAGTGGTTCCTATGCCCCCAAAGCCAAAGCAGTCCTTTATACTGAGAGTTCCGCCAGAC
TCCAAGCTGGGCCAAGACCTACTTCGAGATGCCACTAACGGGCCCAAGACCATCCACCAG
CTAGTGCTGGAGCACTTCCTCACCTTCTTGCCCAAGCCAAGCCTGGTCCAGCCCAGTCAG
AAAGTCAAGGAGACCTTGGTTATTATGAAAGATGTGAGCTCAAGCCTTCAGAACAGAGTG
CATCCTCGTCCCTTGGTGAAGCTTCTGCCCAAAGGAGTCCAAAAGGAACAAGAGACAGTG
TCTCTGTATTTGAAAGCTAACCCTGAGGAGCTGGTGGTCTTTGAGGATTTGAATGTATTT
CACTGCCAGGAAGAATGTGTGAGCTTGGATCCTACTCAACAACTCACGTCAGAGAAGGAA
GATGACAGCAGTGTCGGGGAAATGATGTTACTGGTCAATGGCAGTAATCCTGAAGGTGAA
GATCCTGAGAGGGAACCTGTAGAAAATGAAGATTATAGAGAAAAGTCTTCAGATGATGAT
GAAATGGATTCTTCCTTGGTCTCTCAGCAGCCTCCCGATAACCAGGAAAAGGAACGACTA
AATACATCCATTCCACAAAAAAGGAAAATGAGAAATCTGTTAGTTACCATTGAGAATGAT
ACTCCTCTAGAGGAACTCTCAAAATATGTAGACATCAGTATTATTGCCCTTACTCGAAAT
CGGAGGACAAGGAGATGGTACACTTGTCCACTGTGTGGGAAACAGTTTAATGAAAGTTCT
TACCTCATTTCCCACCAGAGGACCCACACTGGAGAAAAACCCTATGACTGTAATCACTGT
GGGAAAAGCTTCAATCATAAAACAAACCTCAATAAACATGAGCGAATTCATACAGGAGAG
AAACCTTATTCCTGTTCTCAGTGTGGAAAAAACTTCCGTCAGAATTCTCATCGGAGTCGT
CATGAAGGAATCCATATAAGGGAGAAGATATTTAAGTGTCCAGAATGTGGGAAAACCTTC
CCAAAGAATGAGGAGTTTGTGCTTCATCTGCAGAGTCATGAGGCTGAGAGACCATATGGT
TGCAAAAAATGTGGGAGAAGATTTGGTCGGCTGTCAAACTGTACCCGGCATGAGAAAACC
CACTCAGCCTGTAAGACCCGAAAGCAGAAGGTTTAAACGAATTCGAGCTCGGTACCCGGG
GATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAA
GGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTC
TAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGT
CCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCT
CTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCA
GCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCC
TGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAG
GTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGC
AGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGAT
GGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCA
CAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCG
GTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCG
CGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACT
GAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCT
CACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACG
CTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGC
ACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTC
GCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTC
GTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGA
TTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACC
CGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGT
ATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGA
GCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTC
AAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGC
AAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAG
GCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCC
GACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGT
TCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCT
TTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGG
CTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCT
TGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGAT
TAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGG
CTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAA
AAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGT
TTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTC
TACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATT
ATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGG
ATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGG
GGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGC
GCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATC
GCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGT
CTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGA
GGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAA
ACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGA
AGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTG
CCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTT
GTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTG
CGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAA
TTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTA
TTTTTCTAAATACATTCAAATATGTATCCGCTCAT