RFX4 ORF clone FXC02374

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Flexi ORF Clone FXC02374

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Clone info.

Species

human

Clone Name

pF1KB7282 Sequence (with vector) Restriction Map

Product ID

FXC02374

HaloTag Clone PID

FHC02374

Original Clone PID

ORK02374

ORF Sequence

DNA sequence (2115 bp)
Protein sequence (705 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463215]

Gene

KIBB7282

Symbol

RFX4

Alias : NYD-SP10

Description

regulatory factor X, 4 (influences HLA class II expression)

Original Clone ID

fk07246

Features of the cloned ORF sequence

Description

Length: 2115 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 705 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS9108.1 8.9e-128 91.4 RFX4 CCDS9106.1 9.9e-128 95.9 RFX4 CCDS55880.1 1e-127 95.9 RFX4 CCDS5113.1 4e-19 36.8 RFX6 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR003150 59 126 PF02257 DNA-binding RFX
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115880 641 603958 91.4 86.2 NP_998759 735 603958 95.9 100.0 NP_001193620 744 603958 95.9 98.3 XP_011533891 892 612659,615710 35.6 86.1 NP_775831 928 612659,615710 36.8 86.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7282 Download

>KIBB7282  2115 bp
ATGCATTGTGGGTTACTGGAGGAACCCGACATGGATTCCACAGAGAGCTGGATTGAAAGA
TGTCTCAACGAAAGTGAAAACAAACGTTATTCCAGCCACACATCTCTGGGGAATGTTTCT
AATGATGAAAATGAGGAAAAAGAAAATAATAGAGCATCCAAGCCCCACTCCACTCCTGCT
ACTCTGCAATGGCTGGAGGAGAACTATGAGATTGCAGAGGGGGTCTGCATCCCTCGCAGT
GCCCTCTATATGCATTACCTGGATTTCTGCGAGAAGAATGATACCCAACCTGTCAATGCT
GCCAGCTTTGGAAAGATCATAAGGCAGCAGTTTCCTCAGTTAACCACCAGAAGACTCGGG
ACCCGAGGACAGTCAAAGTACCATTACTATGGCATTGCAGTGAAAGAAAGCTCCCAATAT
TATGATGTGATGTATTCCAAGAAAGGAGCTGCCTGGGTGAGTGAGACGGGCAAGAAAGAA
GTGAGCAAACAGACAGTGGCATATTCACCCCGGTCCAAACTCGGAACACTGCTGCCAGAA
TTTCCCAATGTCAAAGATCTAAATCTGCCAGCCAGCCTGCCTGAGGAGAAGGTTTCTACC
TTTATTATGATGTACAGAACACACTGTCAGAGAATACTGGGCTCCTCCACGGTGGTGAAC
ATTGTCGGCGTGTGTGACTCCATCCTCTACAAAGCTATCTCCGGGGTGCTGATGCCCACT
GTGCTGCAGGCATTACCTGACAGCTTAACTCAGGTGATTCGAAAGTTTGCCAAGCAACTG
GATGAGTGGCTAAAAGTGGCTCTCCACGACCTCCCAGAAAACTTGCGAAACATCAAGTTC
GAATTGTCGAGAAGGTTCTCCCAAATTCTGAGACGGCAAACATCACTAAATCATCTCTGC
CAGGCATCTCGAACAGTGATCCACAGTGCAGACATCACGTTCCAAATGCTGGAAGACTGG
AGGAACGTGGACCTGAACAGCATCACCAAGCAAACCCTTTACACCATGGAAGACTCTCGC
GATGAGCACCGGAAACTCATCACCCAATTATATCAGGAGTTTGACCATCTCTTGGAGGAG
CAGTCTCCCATCGAGTCCTACATTGAGTGGCTGGATACCATGGTTGACCGCTGTGTTGTG
AAGGTGGCTGCCAAGAGACAAGGGTCCTTGAAGAAAGTGGCCCAGCAGTTCCTCTTGATG
TGGTCCTGTTTCGGCACAAGGGTGATCCGGGACATGACCTTGCACAGCGCCCCCAGCTTC
GGGTCTTTTCACCTAATTCACTTAATGTTTGATGACTACGTGCTCTACCTGTTAGAATCT
CTGCACTGTCAGGAGCGGGCCAATGAGCTCATGCGAGCCATGAAGGGAGAAGGAAGCACT
GCAGAAGTCCGAGAAGAGATCATCTTGACAGAGGCTGCCGCACCAACCCCTTCACCAGTG
CCATCGTTTTCTCCAGCAAAATCTGCCACATCTGTGGAAGTGCCACCTCCCTCTTCCCCT
GTTAGCAATCCTTCCCCTGAGTACACTGGCCTCAGCACTACAGGAGCAATGCAGTCTTAC
ACGTGGTCTCTAACATACACAGTGACGACGGCTGCTGGGTCCCCAGCTGAGAACTCCCAA
CAGCTGCCCTGTATGAGGAACACTCATGTGCCTTCTTCCTCCGTCACACACAGGATACCA
GTTTATCCCCACAGAGAGGAACATGGATACACGGGAAGCTATAACTATGGGAGCTATGGC
AACCAGCATCCTCACCCCATGCAGAGCCAGTATCCGGCCCTCCCTCATGACACAGCTATC
TCTGGGCCACTCCACTATGCCCCTTACCACAGGAGCTCTGCACAGTACCCTTTTAATAGC
CCCACTTCCCGGATGGAACCTTGTTTGATGAGCAGTACTCCCAGACTGCATCCTACCCCA
GTCACTCCCCGCTGGCCAGAGGTGCCCTCAGCCAACACGTGCTACACAAGCCCGTCTGTG
CATTCTGCGAGGTACGGAAACTCTAGTGACATGTATACACCTCTGACAACGCGCAGGAAT
TCTGAATATGAGCACATGCAACACTTTCCTGGCTTTGCTTACATCAACGGAGAGGCCTCT
ACAGGATGGGCTAAA

ORF Protein

Cloned ORF protein sequence for pF1KB7282 Download

>KIBB7282  705 aa
MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILGSSTVVNIVGVCDSILYKAISGVLMPT
VLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLC
QASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEE
QSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSF
GSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPV
PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQ
QLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAI
SGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSV
HSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWAK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7282 Download

>pF1KB7282  5228 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCATTGTGGG
TTACTGGAGGAACCCGACATGGATTCCACAGAGAGCTGGATTGAAAGATGTCTCAACGAA
AGTGAAAACAAACGTTATTCCAGCCACACATCTCTGGGGAATGTTTCTAATGATGAAAAT
GAGGAAAAAGAAAATAATAGAGCATCCAAGCCCCACTCCACTCCTGCTACTCTGCAATGG
CTGGAGGAGAACTATGAGATTGCAGAGGGGGTCTGCATCCCTCGCAGTGCCCTCTATATG
CATTACCTGGATTTCTGCGAGAAGAATGATACCCAACCTGTCAATGCTGCCAGCTTTGGA
AAGATCATAAGGCAGCAGTTTCCTCAGTTAACCACCAGAAGACTCGGGACCCGAGGACAG
TCAAAGTACCATTACTATGGCATTGCAGTGAAAGAAAGCTCCCAATATTATGATGTGATG
TATTCCAAGAAAGGAGCTGCCTGGGTGAGTGAGACGGGCAAGAAAGAAGTGAGCAAACAG
ACAGTGGCATATTCACCCCGGTCCAAACTCGGAACACTGCTGCCAGAATTTCCCAATGTC
AAAGATCTAAATCTGCCAGCCAGCCTGCCTGAGGAGAAGGTTTCTACCTTTATTATGATG
TACAGAACACACTGTCAGAGAATACTGGGCTCCTCCACGGTGGTGAACATTGTCGGCGTG
TGTGACTCCATCCTCTACAAAGCTATCTCCGGGGTGCTGATGCCCACTGTGCTGCAGGCA
TTACCTGACAGCTTAACTCAGGTGATTCGAAAGTTTGCCAAGCAACTGGATGAGTGGCTA
AAAGTGGCTCTCCACGACCTCCCAGAAAACTTGCGAAACATCAAGTTCGAATTGTCGAGA
AGGTTCTCCCAAATTCTGAGACGGCAAACATCACTAAATCATCTCTGCCAGGCATCTCGA
ACAGTGATCCACAGTGCAGACATCACGTTCCAAATGCTGGAAGACTGGAGGAACGTGGAC
CTGAACAGCATCACCAAGCAAACCCTTTACACCATGGAAGACTCTCGCGATGAGCACCGG
AAACTCATCACCCAATTATATCAGGAGTTTGACCATCTCTTGGAGGAGCAGTCTCCCATC
GAGTCCTACATTGAGTGGCTGGATACCATGGTTGACCGCTGTGTTGTGAAGGTGGCTGCC
AAGAGACAAGGGTCCTTGAAGAAAGTGGCCCAGCAGTTCCTCTTGATGTGGTCCTGTTTC
GGCACAAGGGTGATCCGGGACATGACCTTGCACAGCGCCCCCAGCTTCGGGTCTTTTCAC
CTAATTCACTTAATGTTTGATGACTACGTGCTCTACCTGTTAGAATCTCTGCACTGTCAG
GAGCGGGCCAATGAGCTCATGCGAGCCATGAAGGGAGAAGGAAGCACTGCAGAAGTCCGA
GAAGAGATCATCTTGACAGAGGCTGCCGCACCAACCCCTTCACCAGTGCCATCGTTTTCT
CCAGCAAAATCTGCCACATCTGTGGAAGTGCCACCTCCCTCTTCCCCTGTTAGCAATCCT
TCCCCTGAGTACACTGGCCTCAGCACTACAGGAGCAATGCAGTCTTACACGTGGTCTCTA
ACATACACAGTGACGACGGCTGCTGGGTCCCCAGCTGAGAACTCCCAACAGCTGCCCTGT
ATGAGGAACACTCATGTGCCTTCTTCCTCCGTCACACACAGGATACCAGTTTATCCCCAC
AGAGAGGAACATGGATACACGGGAAGCTATAACTATGGGAGCTATGGCAACCAGCATCCT
CACCCCATGCAGAGCCAGTATCCGGCCCTCCCTCATGACACAGCTATCTCTGGGCCACTC
CACTATGCCCCTTACCACAGGAGCTCTGCACAGTACCCTTTTAATAGCCCCACTTCCCGG
ATGGAACCTTGTTTGATGAGCAGTACTCCCAGACTGCATCCTACCCCAGTCACTCCCCGC
TGGCCAGAGGTGCCCTCAGCCAACACGTGCTACACAAGCCCGTCTGTGCATTCTGCGAGG
TACGGAAACTCTAGTGACATGTATACACCTCTGACAACGCGCAGGAATTCTGAATATGAG
CACATGCAACACTTTCCTGGCTTTGCTTACATCAACGGAGAGGCCTCTACAGGATGGGCT
AAAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT
GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC
TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT
GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG
CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA
GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA
CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA
AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG
ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA
GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT
TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC
GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC
GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC
GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG
GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC
ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC
CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT
CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC
AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG
AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG
GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC
GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC
GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG
ACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCT
CATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAA
GATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAA
AAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCC
GAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTA
GTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCT
GTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACG
ATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAG
CTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGC
CACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGG
AGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTT
TCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATG
GAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCA
CATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTG
AGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC
ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG
CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT
TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA
CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC
GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA
GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC
GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG
TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC
AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG
CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG
GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT
CCGCTCAT