OTOP3 ORF clone FXC02353

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Flexi ORF Clone FXC02353

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Clone info.

Species

human

Clone Name

pF1KB7247 Sequence (with vector) Restriction Map

Product ID

FXC02353

HaloTag Clone PID

FHC02353

ORF Sequence

DNA sequence (1788 bp)
Protein sequence (596 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463989]

Gene

KIBB7247

Symbol

OTOP3

Description

otopetrin 3, transcript variant 1

Original Clone ID

oc00463

Features of the cloned ORF sequence

Description

Length: 1788 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 596 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS11709.1 0 100.0 OTOP3 CCDS11708.1 1.5e-30 43.0 OTOP2 CCDS3372.1 3e-13 32.1 OTOP1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR004878 277 480 PF03189 Otopetrin IPR004878 524 582 PF03189 Otopetrin
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 86 AGQLFSGLLALNVVFLGGAFICS 108 PRIMARY 23 2 117 TLGDVWILLATLKVLSLLWLLYY 139 PRIMARY 23 3 160 LWVRGSLVLFGSCTFCLNIFRVG 182 SECONDARY 23 4 191 KSQLDLVFSVIEMVFIGVQTWVL 213 PRIMARY 23 5 229 RCGLMLTLATNLLLWVLAVTNDS 251 SECONDARY 23 6 292 MLYPFSTEYCLICCAVLFVMWKN 314 PRIMARY 23 7 338 IFGPLLGLLVLLAGVCVFVLFQI 360 PRIMARY 23 8 372 FTLYYAFYVAVLPTMSLACLAGT 394 PRIMARY 23 9 416 VVLLMGAALGQMGIAYFSIVAIV 438 SECONDARY 23 10 448 RLILAYSLLLILQHIAQNLFIIE 470 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_839947 596 607828 100.0 100.0 XP_011523046 567 607828 99.6 94.8 NP_001258934 578 607828 98.6 95.1 XP_011523781 562 607827 43.0 85.7 NP_835454 562 607827 43.0 85.7 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KB7247 Download

>KIBB7247  1788 bp
ATGGGCCGCGGAGCCCGAGCGGCGGCTGCGCAGTCCCGCTGGGGGAGGGCGTCGCGGGCA
TCGGTCTCACCTGGACGGACGATCCGCTCAGCGCCCGCAGTCGGTGAAGCACAGGAGACT
GAAGCAGCCCCGGAGAAGGAGAACCGAGTGGATGTGGGGGCCGAGGAGAGAGCGGCCGCC
ACCCGGCCCCGGCAGAAGTCCTGGCTGGTGAGGCATTTCTCTCTGCTGCTGCGGCGGGAC
CGGCAGGCCCAGAAGGCTGGACAACTCTTCTCGGGGCTCCTGGCCCTGAATGTGGTGTTC
CTGGGTGGCGCCTTCATCTGCAGCATGATCTTCAACAAGGTGGCCGTCACTCTGGGTGAC
GTGTGGATCCTGCTGGCCACGCTGAAGGTCCTCTCCCTGCTTTGGCTTCTCTACTATGTG
GCAAGCACCACCCGCCGACCACACGCCGTGCTCTACCAAGATCCCCACGCGGGGCCCCTC
TGGGTGCGGGGTTCCCTAGTGCTCTTCGGCAGCTGCACCTTCTGCCTCAACATCTTCCGA
GTGGGCTACGATGTGAGCCACATCCGCTGCAAGTCACAGCTGGACCTTGTCTTCTCTGTC
ATCGAGATGGTCTTCATCGGCGTCCAGACCTGGGTGCTCTGGAAACACTGCAAAGACTGT
GTTCGGGTCCAGACCAACTTCACTAGGTGTGGCCTGATGCTGACCCTGGCCACAAACCTG
CTGCTGTGGGTTCTGGCCGTTACCAATGACTCCATGCACCGAGAGATCGAAGCTGAGCTT
GGCATCCTCATGGAAAAATCCACAGGCAATGAGACCAACACCTGTCTGTGCCTCAATGCC
ACCGCGTGTGAAGCTTTCCGGAGAGGCTTCCTGATGCTCTACCCCTTCAGCACTGAGTAC
TGCCTCATCTGCTGTGCTGTGCTGTTTGTCATGTGGAAGAACGTGGGCCGCCACGTGGCA
CCCCACATGGGTGCCCACCCTGCCACCGCACCCTTCCACCTGCACGGGGCCATCTTCGGG
CCGCTGCTGGGCCTGCTGGTGCTGCTGGCAGGTGTGTGCGTCTTTGTGCTCTTCCAAATC
GAGGCCAGTGGCCCTGCCATTGCTTGCCAGTACTTCACCCTCTACTATGCCTTCTATGTG
GCTGTGCTGCCCACCATGAGTCTGGCGTGCCTGGCGGGCACAGCCATACACGGGCTGGAG
GAGAGAGAGCTGGACACGGTCAAGAACCCTACCCGCAGCCTGGATGTGGTGCTGCTAATG
GGTGCTGCACTGGGCCAGATGGGCATCGCCTATTTCTCCATCGTGGCCATTGTGGCCAAG
CGCCCGCATGAGCTGCTCAACCGCCTCATCCTGGCCTACTCGCTGCTGCTCATCCTGCAG
CACATCGCTCAGAACCTCTTCATCATCGAGGGCCTGCACCGGCGCCCACTCTGGGAGACA
GTTCCCGAGGGCCTGGCAGGAAAGCAGGAGGCTGAGCCTCCCCGCAGAGGCTCCTTGCTG
GAGCTGGGCCAGGGCCTGCAGCGGGCCTCACTGGCCTACATCCACTCCTACAGCCACCTC
AACTGGAAGCGGAGGGCACTCAAGGAGATCTCACTCTTCCTCATCCTCTGCAATATCACA
CTGTGGATGATGCCTGCATTTGGCATACACCCGGAGTTTGAGAACGGGCTAGAAAAGGAT
TTCTACGGCTACCAGATATGGTTCGCCATCGTCAACTTCGGCCTGCCTCTGGGGGTCTTC
TACCGCATGCACTCTGTGGGAGGCCTGGTGGAGGTCTACCTGGGGGCC

ORF Protein

Cloned ORF protein sequence for pF1KB7247 Download

>KIBB7247  596 aa
MGRGARAAAAQSRWGRASRASVSPGRTIRSAPAVGEAQETEAAPEKENRVDVGAEERAAA
TRPRQKSWLVRHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVAVTLGD
VWILLATLKVLSLLWLLYYVASTTRRPHAVLYQDPHAGPLWVRGSLVLFGSCTFCLNIFR
VGYDVSHIRCKSQLDLVFSVIEMVFIGVQTWVLWKHCKDCVRVQTNFTRCGLMLTLATNL
LLWVLAVTNDSMHREIEAELGILMEKSTGNETNTCLCLNATACEAFRRGFLMLYPFSTEY
CLICCAVLFVMWKNVGRHVAPHMGAHPATAPFHLHGAIFGPLLGLLVLLAGVCVFVLFQI
EASGPAIACQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTVKNPTRSLDVVLLM
GAALGQMGIAYFSIVAIVAKRPHELLNRLILAYSLLLILQHIAQNLFIIEGLHRRPLWET
VPEGLAGKQEAEPPRRGSLLELGQGLQRASLAYIHSYSHLNWKRRALKEISLFLILCNIT
LWMMPAFGIHPEFENGLEKDFYGYQIWFAIVNFGLPLGVFYRMHSVGGLVEVYLGA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KB7247 Download

>pF1KB7247  4901 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGGCCGCGGA
GCCCGAGCGGCGGCTGCGCAGTCCCGCTGGGGGAGGGCGTCGCGGGCATCGGTCTCACCT
GGACGGACGATCCGCTCAGCGCCCGCAGTCGGTGAAGCACAGGAGACTGAAGCAGCCCCG
GAGAAGGAGAACCGAGTGGATGTGGGGGCCGAGGAGAGAGCGGCCGCCACCCGGCCCCGG
CAGAAGTCCTGGCTGGTGAGGCATTTCTCTCTGCTGCTGCGGCGGGACCGGCAGGCCCAG
AAGGCTGGACAACTCTTCTCGGGGCTCCTGGCCCTGAATGTGGTGTTCCTGGGTGGCGCC
TTCATCTGCAGCATGATCTTCAACAAGGTGGCCGTCACTCTGGGTGACGTGTGGATCCTG
CTGGCCACGCTGAAGGTCCTCTCCCTGCTTTGGCTTCTCTACTATGTGGCAAGCACCACC
CGCCGACCACACGCCGTGCTCTACCAAGATCCCCACGCGGGGCCCCTCTGGGTGCGGGGT
TCCCTAGTGCTCTTCGGCAGCTGCACCTTCTGCCTCAACATCTTCCGAGTGGGCTACGAT
GTGAGCCACATCCGCTGCAAGTCACAGCTGGACCTTGTCTTCTCTGTCATCGAGATGGTC
TTCATCGGCGTCCAGACCTGGGTGCTCTGGAAACACTGCAAAGACTGTGTTCGGGTCCAG
ACCAACTTCACTAGGTGTGGCCTGATGCTGACCCTGGCCACAAACCTGCTGCTGTGGGTT
CTGGCCGTTACCAATGACTCCATGCACCGAGAGATCGAAGCTGAGCTTGGCATCCTCATG
GAAAAATCCACAGGCAATGAGACCAACACCTGTCTGTGCCTCAATGCCACCGCGTGTGAA
GCTTTCCGGAGAGGCTTCCTGATGCTCTACCCCTTCAGCACTGAGTACTGCCTCATCTGC
TGTGCTGTGCTGTTTGTCATGTGGAAGAACGTGGGCCGCCACGTGGCACCCCACATGGGT
GCCCACCCTGCCACCGCACCCTTCCACCTGCACGGGGCCATCTTCGGGCCGCTGCTGGGC
CTGCTGGTGCTGCTGGCAGGTGTGTGCGTCTTTGTGCTCTTCCAAATCGAGGCCAGTGGC
CCTGCCATTGCTTGCCAGTACTTCACCCTCTACTATGCCTTCTATGTGGCTGTGCTGCCC
ACCATGAGTCTGGCGTGCCTGGCGGGCACAGCCATACACGGGCTGGAGGAGAGAGAGCTG
GACACGGTCAAGAACCCTACCCGCAGCCTGGATGTGGTGCTGCTAATGGGTGCTGCACTG
GGCCAGATGGGCATCGCCTATTTCTCCATCGTGGCCATTGTGGCCAAGCGCCCGCATGAG
CTGCTCAACCGCCTCATCCTGGCCTACTCGCTGCTGCTCATCCTGCAGCACATCGCTCAG
AACCTCTTCATCATCGAGGGCCTGCACCGGCGCCCACTCTGGGAGACAGTTCCCGAGGGC
CTGGCAGGAAAGCAGGAGGCTGAGCCTCCCCGCAGAGGCTCCTTGCTGGAGCTGGGCCAG
GGCCTGCAGCGGGCCTCACTGGCCTACATCCACTCCTACAGCCACCTCAACTGGAAGCGG
AGGGCACTCAAGGAGATCTCACTCTTCCTCATCCTCTGCAATATCACACTGTGGATGATG
CCTGCATTTGGCATACACCCGGAGTTTGAGAACGGGCTAGAAAAGGATTTCTACGGCTAC
CAGATATGGTTCGCCATCGTCAACTTCGGCCTGCCTCTGGGGGTCTTCTACCGCATGCAC
TCTGTGGGAGGCCTGGTGGAGGTCTACCTGGGGGCCGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT