SNPH ORF clone FXC01972

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Flexi ORF Clone FXC01972

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Clone info.

Species

human

Clone Name

pF1KA0374 Sequence (with vector) Restriction Map

Product ID

FXC01972

HaloTag Clone PID

FHC01972

ORF Sequence

DNA sequence (1614 bp)
Protein sequence (538 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB463298]

Gene

KIAA0374

Symbol

SNPH

Description

syntaphilin

Original Clone ID

hh00327

Features of the cloned ORF sequence

Description

Length: 1614 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 538 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS82590.1 2.6e-134 100.0 SNPH CCDS13012.1 5.8e-122 100.0 SNPH CCDS83315.1 5.3e-28 41.8 SYBU CCDS55271.1 5.4e-28 41.8 SYBU CCDS43764.1 6.3e-28 41.8 SYBU The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition None - - - - -
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 468 HYIVDLLAVVVPAVPTVAWLCR 489 PRIMARY 22
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001305163 538 604942 100.0 100.0 NP_055538 494 604942 100.0 91.8 XP_005260946 527 604942 93.7 91.8 XP_011527706 527 604942 93.7 91.8 XP_011527705 571 604942 94.2 99.8 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0374 Download

>KIAA0374  1614 bp
ATGCCGGGCAGCGGCCCCAGCGAGAGGATGACGTGGCCTGGCCCGGCCCTTTCTGCGGGC
CCCCCAACCCGCCCTCTCTCCTCAGCCCCCGGGATACCGCCCATCCCACCCCTTACTCGG
ACCCACAGCCTCATGGCCATGTCCCTGCCAGGAAGTAGACGGACCTCTGCTGGATCACGC
AGGCGCACCTCTCCACCTGTGAGCGTGCGGGATGCCTACGGCACCTCTTCGCTCAGCAGC
AGCAGCAATTCTGGCTCCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCATG
AAATACACGCTGTGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCTG
ACCCCCCTGCAGCAGAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCTGAAGGACACA
CAGGACCGGCTCCAGGACCGGGACACAGAGATTGATGACCTGAAGACGCAGCTGTCACGC
ATGCAGGAGGACTGGATTGAGGAGGAGTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAG
GAGGCCCGAAAGGAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTG
ATTGACAAGGACAAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAAG
CTGGAGACGCTGCTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGC
ACTGGGGAGTCAGCCGGTGGGTCCCCTGCCCGCTCCCTCACCCGCAGCTCCACCTACACC
AAGCTGAGTGACCCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCT
GCTGAGGATGGGGCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGAC
GCGCTGGAAGCCAGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCG
CTGCACAGCTCCTTCGGCCTGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTG
CTGTGTGGCATGGAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACA
GACTTCGTGCAGTACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCAGGCCCAG
GTCTGTGGGACAGACCCTGAGTCAGGGGACAGGTGCCCAGAGCTGGATGCCCACCCTTCA
GGGCCCAGAGACCCCAACTCAGCAGTGGTGGTGACAGTGGGTGATGAGCTAGAGGCCCCA
GAGCCCATCACCCGTGGACCCACCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCAG
TCGGTGAGCGTGGTGTGCCCCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAG
CCCAAGAGCTACTGGAGCCGCCACTACATCGTGGATCTGCTGGCTGTGGTGGTGCCGGCC
GTGCCCACGGTGGCCTGGCTTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATCTACAAC
ATCAGCTCCCTGCTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGC
TGCCGCTCGCTGAGCCAGCCGAGTCCCAGCCCAGCGGGCGGCGGCTCCCAGCTC

ORF Protein

Cloned ORF protein sequence for pF1KA0374 Download

>KIAA0374  538 aa
MPGSGPSERMTWPGPALSAGPPTRPLSSAPGIPPIPPLTRTHSLMAMSLPGSRRTSAGSR
RRTSPPVSVRDAYGTSSLSSSSNSGSYKGSDSSPTPRRSMKYTLCSDNHGIKPPTPEQYL
TPLQQKEVCIRHLKARLKDTQDRLQDRDTEIDDLKTQLSRMQEDWIEEECHRVEAQLALK
EARKEIKQLKQVIDTVKNNLIDKDKGLQKYFVDINIQNKKLETLLHSMEVAQNGMAKEDG
TGESAGGSPARSLTRSSTYTKLSDPAVCGDRQPGDPSSGSAEDGADSGFAAADDTLSRTD
ALEASSLLSSGVDCGTEETSLHSSFGLGPRFPASNTYEKLLCGMEAGVQASCMQERAIQT
DFVQYQPDLDTILEKVTQAQVCGTDPESGDRCPELDAHPSGPRDPNSAVVVTVGDELEAP
EPITRGPTPQRPGANPNPGQSVSVVCPMEEEEEAAVAEKEPKSYWSRHYIVDLLAVVVPA
VPTVAWLCRSQRRQGQPIYNISSLLRGCCTVALHSIRRISCRSLSQPSPSPAGGGSQL

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0374 Download

>pF1KA0374  4727 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCGGGCAGC
GGCCCCAGCGAGAGGATGACGTGGCCTGGCCCGGCCCTTTCTGCGGGCCCCCCAACCCGC
CCTCTCTCCTCAGCCCCCGGGATACCGCCCATCCCACCCCTTACTCGGACCCACAGCCTC
ATGGCCATGTCCCTGCCAGGAAGTAGACGGACCTCTGCTGGATCACGCAGGCGCACCTCT
CCACCTGTGAGCGTGCGGGATGCCTACGGCACCTCTTCGCTCAGCAGCAGCAGCAATTCT
GGCTCCTACAAGGGCAGTGACAGCAGTCCCACGCCAAGGCGCTCCATGAAATACACGCTG
TGCAGTGACAACCATGGCATCAAGCCCCCGACCCCGGAGCAGTACCTGACCCCCCTGCAG
CAGAAGGAGGTGTGCATCCGGCACCTGAAAGCCCGGCTGAAGGACACACAGGACCGGCTC
CAGGACCGGGACACAGAGATTGATGACCTGAAGACGCAGCTGTCACGCATGCAGGAGGAC
TGGATTGAGGAGGAGTGCCACCGCGTGGAGGCCCAGCTGGCCCTGAAGGAGGCCCGAAAG
GAGATCAAGCAGCTCAAGCAGGTCATCGACACTGTCAAGAACAACCTGATTGACAAGGAC
AAGGGGCTGCAGAAGTACTTCGTGGACATCAACATCCAGAACAAGAAGCTGGAGACGCTG
CTGCACAGCATGGAGGTGGCCCAGAATGGCATGGCCAAGGAGGATGGCACTGGGGAGTCA
GCCGGTGGGTCCCCTGCCCGCTCCCTCACCCGCAGCTCCACCTACACCAAGCTGAGTGAC
CCGGCTGTCTGTGGTGACCGCCAGCCGGGTGATCCCTCCAGCGGCTCTGCTGAGGATGGG
GCAGACAGTGGCTTTGCAGCAGCCGATGACACACTGAGCCGGACGGACGCGCTGGAAGCC
AGCAGCCTGCTGTCGTCGGGGGTGGACTGTGGCACCGAGGAGACCTCGCTGCACAGCTCC
TTCGGCCTGGGCCCCCGCTTCCCTGCCAGCAACACCTATGAGAAGCTGCTGTGTGGCATG
GAGGCTGGTGTGCAGGCCAGCTGCATGCAGGAGCGTGCCATCCAGACAGACTTCGTGCAG
TACCAGCCTGACCTTGACACCATCCTGGAGAAAGTGACCCAGGCCCAGGTCTGTGGGACA
GACCCTGAGTCAGGGGACAGGTGCCCAGAGCTGGATGCCCACCCTTCAGGGCCCAGAGAC
CCCAACTCAGCAGTGGTGGTGACAGTGGGTGATGAGCTAGAGGCCCCAGAGCCCATCACC
CGTGGACCCACCCCACAGCGGCCTGGTGCCAACCCCAACCCTGGCCAGTCGGTGAGCGTG
GTGTGCCCCATGGAAGAGGAGGAGGAGGCTGCCGTGGCTGAGAAGGAGCCCAAGAGCTAC
TGGAGCCGCCACTACATCGTGGATCTGCTGGCTGTGGTGGTGCCGGCCGTGCCCACGGTG
GCCTGGCTTTGCCGCTCCCAGCGGCGCCAGGGCCAGCCCATCTACAACATCAGCTCCCTG
CTGCGGGGCTGCTGCACTGTGGCCTTGCACTCCATCCGCAGGATCAGCTGCCGCTCGCTG
AGCCAGCCGAGTCCCAGCCCAGCGGGCGGCGGCTCCCAGCTCGTTTAAACGAATTCGAGC
TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA
CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC
CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG
TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC
TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT
CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA
GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG
CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG
ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG
CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC
TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG
CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG
GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC
GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT
CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG
CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC
GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG
CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT
GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC
CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA
GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC
GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC
GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGA
CTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACG
TGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAA
TCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGT
GGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAG
AGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAA
CTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAG
TGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCA
GCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACAC
CGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAA
GGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCC
AGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCG
TCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGC
CTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATC
CCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGG
AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT
GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA
AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT
GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA
TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC
GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG
CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT
GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG
AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC
GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG
ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG
CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA
CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT