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SpecieshumanProduct IDFXC01375Cloning SiteSgfI-PmeIGeneKIBB4218SymbolPCDHB14
Alias : PCDH-BETA14Descriptionprotocadherin beta 14Original Clone IDfh04093
Length: 2394 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 798 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS4256.1 0 100.0 PCDHB14 CCDS4244.1 0 78.8 PCDHB2 CCDS4253.1 0 77.0 PCDHB11 CCDS4251.1 0 77.4 PCDHB16 CCDS4245.1 0 76.4 PCDHB3
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition FPrintScan IPR002126 73 92 PR00205 Cadherin IPR002126 242 271 PR00205 Cadherin IPR002126 314 326 PR00205 Cadherin IPR002126 326 345 PR00205 Cadherin IPR002126 449 462 PR00205 Cadherin IPR002126 509 535 PR00205 Cadherin IPR002126 543 560 PR00205 Cadherin HMMPfam IPR013164 30 112 PF08266 Cadherin IPR002126 140 233 PF00028 Cadherin IPR002126 247 337 PF00028 Cadherin IPR002126 355 440 PF00028 Cadherin IPR002126 456 552 PF00028 Cadherin IPR002126 580 661 PF00028 Cadherin HMMSmart IPR002126 155 240 SM00112 Cadherin IPR002126 264 345 SM00112 Cadherin IPR002126 368 449 SM00112 Cadherin IPR002126 473 559 SM00112 Cadherin IPR002126 589 670 SM00112 Cadherin ProfileScan IPR002126 134 242 PS50268 Cadherin IPR002126 243 347 PS50268 Cadherin IPR002126 348 451 PS50268 Cadherin IPR002126 452 561 PS50268 Cadherin IPR002126 576 671 PS50268 Cadherin
Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length SOSUI2 1 13 QVLIFLVLLGLSRAGTESAHY 33 SECONDARY 21 2 689 YLVVALASVSSLFLFSVLLFVAV 711 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_061757 798 606340 100.0 100.0 NP_061759 798 606328 78.8 98.2 NP_061754 797 606337 77.0 99.7 NP_066008 776 606345 77.4 97.0 NP_061760 796 606329 76.4 99.4 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KB4218 Download>KIBB4218 2394 bp ATGGAGATCAGAGGGGCACTCGATCTGCGAAAAAGGCAAGTTCTAATATTCCTTGTTTTG CTGGGATTGTCTCGGGCAGGTACTGAATCTGCACACTATTCTGTGGCAGAGGAAACAGAA ATTGGCTCTTTTGTGGCTAATCTAGCGAGGGACCTAGGGCTGGGGGTGGAGGAGCTGTCT TCACGTGAAGCCCGGGTAGTGTCTGATGATAATAAAAAGTATTTGCACCTTGATTTGCTG ACTGGGAATTTGCTCCTAAATGAGAAACTAGACCGAGACGAGCTGTGTGGCTCCACCGAG CCCTGTGTGCTGCATTTTCAGGTGGTTTTGGAAAACCCTTTACAGTTTTTTCGGTTTGAG CTGTGTGTCAAAGACATAAATGATCACTCCCCTACATTTCTAGACAAGGAAATACTTATT AAAATATCAGAAGGTACCACTGTTGGAGCTACCTTTCTAATGGAGAGTGCTCAAGATTTG GATGTCGGAAGCAACAGTCTCCAAAACTACACAATTAGCCCCAATTCTCACTTCTACATT AAAATTCCCGACAGTAGTGACAGAAAGATATACCCAGAGCTGGTCCTAGATAGAGCTTTA GATTATGAACAGGAAGCTGAACTCAGATTAACACTCACAGCAGTGGATGGTGGATCCCCG CCCAAGTCTGGGACAACTTTGGTTCTCATCAAGGTGTTGGACATCAATGATAATGCCCCT GAGTTTCCTCAGAGTCTCTATGAGGTGCAAGTCCCCGAGGACAGACCCCTTGGCTCCTGG ATTGCCACCATCTCAGCTAAGGATCTGGATGCAGGAAACTATGGAAAAATATCTTACACA TTTTTCCATGCATCAGAAGATATTCGTAAAACATTTGAAATTAATCCAATATCTGGGGAA GTTAATTTGAGATCACCCCTGGATTTTGAAGTAATACAGTCCTACACTATAAATATTCAG GCAACAGATGGTGGGGGTCTTTCAGGAAAATGCACCCTTCTAGTTAAAGTTATGGATATA AACGACAACCCACCAGAAGTGACCATATCGTCGATTACAAAGAGAATTCCAGAGAATGCC TCAGAGACCCTAGTAGCTCTTTTTAGTATCCTAGACCAAGACTCTGGAGACAATGGGAGG ATGATTTGCTCTATTCAAGATAACCTCCCTTTTTTCCTGAAACCGACCTTCAAGAACTTT TTCACTCTAGTTTCTGAAAAAGCACTGGACAGAGAGAGCCAAGCCGAGTACAACATCACG ATCACCGTCACAGACTTGGGGACACCCAGGCTGAAAACCGAGTACAACATAACCGTGCTG CTCTCTGACGTCAATGACAACGCCCCCACCTTCACCCAAACCTCCTACACCCTGTTCGTC CGCGAGAACAACAGCCCCGCCCTGCACATCGGCAGCGTCAGCGCCACAGACAGAGACTCA GGCACCAACGCCCAGGTCAACTACTCGCTGCTGCCGCCCCAGGACCGGCACCTGCCCCTC GCCTCCTTGGTCTCCATCAACGCGGACAATGGCCACCTGTTTGCCCTCAGGTCGCTGGAC TACGAGGCCCTACAGGAGTTCGAGTTTCGCGTGGGCGCCACAGACCGCGGGTCCCCGGCG TTGAGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTC GTGCTGTACCCGCTGCAGAACGGCTCCGCGCCCTGCACCGAGCTGGTGCCCCGGGCGGCC GAGCCGGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCC TGGCTGTCGTACCAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCAC AATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTG GTGGTGCTGGTCAAGGACAATGGCGAGCCTCCTCGCTCGGCCACCGCCACGCTGCACGTG CTCCTGGTGGACGGCTTCTCCCAGCCCTACCTGCCGCTCCCTGAGGCGGCCCCGGCCCAG GCCCAGGCCGACTCCCTCACCGTCTACCTGGTGGTGGCATTGGCCTCGGTGTCGTCGCTC TTCCTCTTCTCGGTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCC TCGGTGGGTCGCTGCTCGGTGCCCGAGGGTCCCTTTCCAGGGCATCTGGTGGACGTGAGC GGCACCGGGACCCTGTCCCAGAGCTACCAATACGAGGTGTGTCTGACAGGAGGTTCCGGG ACAAATGAGTTCAAATTTCTGAAGCCGATTATCCCCAATTTTCAAGTTCATGACACTGGT AGGAATATGGGGGAAATCGAGAACTTTCGAAATAGCTTTGGACTTAACATTCAA
Cloned ORF protein sequence for pF1KB4218 Download>KIBB4218 798 aa MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG RNMGEIENFRNSFGLNIQ
Nucleotide Sequence (with vector) for pF1KB4218 Download>pF1KB4218 5507 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGAGATCAGA GGGGCACTCGATCTGCGAAAAAGGCAAGTTCTAATATTCCTTGTTTTGCTGGGATTGTCT CGGGCAGGTACTGAATCTGCACACTATTCTGTGGCAGAGGAAACAGAAATTGGCTCTTTT GTGGCTAATCTAGCGAGGGACCTAGGGCTGGGGGTGGAGGAGCTGTCTTCACGTGAAGCC CGGGTAGTGTCTGATGATAATAAAAAGTATTTGCACCTTGATTTGCTGACTGGGAATTTG CTCCTAAATGAGAAACTAGACCGAGACGAGCTGTGTGGCTCCACCGAGCCCTGTGTGCTG CATTTTCAGGTGGTTTTGGAAAACCCTTTACAGTTTTTTCGGTTTGAGCTGTGTGTCAAA GACATAAATGATCACTCCCCTACATTTCTAGACAAGGAAATACTTATTAAAATATCAGAA GGTACCACTGTTGGAGCTACCTTTCTAATGGAGAGTGCTCAAGATTTGGATGTCGGAAGC AACAGTCTCCAAAACTACACAATTAGCCCCAATTCTCACTTCTACATTAAAATTCCCGAC AGTAGTGACAGAAAGATATACCCAGAGCTGGTCCTAGATAGAGCTTTAGATTATGAACAG GAAGCTGAACTCAGATTAACACTCACAGCAGTGGATGGTGGATCCCCGCCCAAGTCTGGG ACAACTTTGGTTCTCATCAAGGTGTTGGACATCAATGATAATGCCCCTGAGTTTCCTCAG AGTCTCTATGAGGTGCAAGTCCCCGAGGACAGACCCCTTGGCTCCTGGATTGCCACCATC TCAGCTAAGGATCTGGATGCAGGAAACTATGGAAAAATATCTTACACATTTTTCCATGCA TCAGAAGATATTCGTAAAACATTTGAAATTAATCCAATATCTGGGGAAGTTAATTTGAGA TCACCCCTGGATTTTGAAGTAATACAGTCCTACACTATAAATATTCAGGCAACAGATGGT GGGGGTCTTTCAGGAAAATGCACCCTTCTAGTTAAAGTTATGGATATAAACGACAACCCA CCAGAAGTGACCATATCGTCGATTACAAAGAGAATTCCAGAGAATGCCTCAGAGACCCTA GTAGCTCTTTTTAGTATCCTAGACCAAGACTCTGGAGACAATGGGAGGATGATTTGCTCT ATTCAAGATAACCTCCCTTTTTTCCTGAAACCGACCTTCAAGAACTTTTTCACTCTAGTT TCTGAAAAAGCACTGGACAGAGAGAGCCAAGCCGAGTACAACATCACGATCACCGTCACA GACTTGGGGACACCCAGGCTGAAAACCGAGTACAACATAACCGTGCTGCTCTCTGACGTC AATGACAACGCCCCCACCTTCACCCAAACCTCCTACACCCTGTTCGTCCGCGAGAACAAC AGCCCCGCCCTGCACATCGGCAGCGTCAGCGCCACAGACAGAGACTCAGGCACCAACGCC CAGGTCAACTACTCGCTGCTGCCGCCCCAGGACCGGCACCTGCCCCTCGCCTCCTTGGTC TCCATCAACGCGGACAATGGCCACCTGTTTGCCCTCAGGTCGCTGGACTACGAGGCCCTA CAGGAGTTCGAGTTTCGCGTGGGCGCCACAGACCGCGGGTCCCCGGCGTTGAGCAGCGAG GCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCGCCCTTCGTGCTGTACCCG CTGCAGAACGGCTCCGCGCCCTGCACCGAGCTGGTGCCCCGGGCGGCCGAGCCGGGCTAC CTGGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTGTCGTAC CAGCTGCTCAAGGCCACGGAGCCCGGGCTGTTCGGCGTGTGGGCGCACAATGGCGAGGTG CGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCACAGGCTGGTGGTGCTGGTC AAGGACAATGGCGAGCCTCCTCGCTCGGCCACCGCCACGCTGCACGTGCTCCTGGTGGAC GGCTTCTCCCAGCCCTACCTGCCGCTCCCTGAGGCGGCCCCGGCCCAGGCCCAGGCCGAC TCCCTCACCGTCTACCTGGTGGTGGCATTGGCCTCGGTGTCGTCGCTCTTCCTCTTCTCG GTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGGGCGGCCTCGGTGGGTCGC TGCTCGGTGCCCGAGGGTCCCTTTCCAGGGCATCTGGTGGACGTGAGCGGCACCGGGACC CTGTCCCAGAGCTACCAATACGAGGTGTGTCTGACAGGAGGTTCCGGGACAAATGAGTTC AAATTTCTGAAGCCGATTATCCCCAATTTTCAAGTTCATGACACTGGTAGGAATATGGGG GAAATCGAGAACTTTCGAAATAGCTTTGGACTTAACATTCAAGTTTAAACGAATTCGAGC TCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAA CAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACC CCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGG TTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGC TACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATT CATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCA GCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCG CCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGG ATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATG CTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGC TATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCG CAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAG GACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTC GACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGAT CTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGG CGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATC GAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAG CATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGT GAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGC CGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATA GCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTC GTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGAC GAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGA CTATAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACG TGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAA TCCTTTTTTTCTGCGCGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGT GGTTTGTTTGCCGGATCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAG AGCGCAGATACCAAATACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAA CTCTGTAGCACCGCCTACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAG TGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCA GCGGTCGGGCTGAACGGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACAC CGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAA GGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCC AGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCG TCGATTTTTGTGATGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGC CTTTTTACGGTTCCTGGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATC CCCTGATTCTGTGGATAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGG AACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGT GGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAA AATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCT GCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAA TCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGC GTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAG CGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCAT GCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAG AGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTC GTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGG ATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG CCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAA CTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT
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