HSPA13 ORF clone FXC00993

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Flexi ORF Clone FXC00993

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Clone info.

Species

human

Clone Name

pF1KSDB0037 Sequence (with vector) Restriction Map

Product ID

FXC00993

HaloTag Clone PID

FHC00993

Original Clone PID

ORK00993

ORF Sequence

DNA sequence (1413 bp)
Protein sequence (471 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384374]

Gene

KIBB0037

Symbol

HSPA13

Alias : STCH

Description

heat shock protein 70kDa family, member 13

Original Clone ID

fj14744

Features of the cloned ORF sequence

Description

Length: 1413 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 471 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS13567.1 6.9e-193 100.0 HSPA13 CCDS34413.1 5.5e-43 39.3 HSPA1L CCDS1231.1 3e-42 39.0 HSPA6 CCDS34415.1 4e-42 39.5 HSPA1B CCDS34414.1 4e-42 39.5 HSPA1A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR001023 32 45 PR00301 Heat shock protein Hsp70 IPR001023 62 74 PR00301 Heat shock protein Hsp70 IPR001023 399 415 PR00301 Heat shock protein Hsp70 IPR001023 430 450 PR00301 Heat shock protein Hsp70 HMMPfam IPR013126 33 317 PF00012 Heat shock protein 70 IPR013126 358 450 PF00012 Heat shock protein 70
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MAREMTILGSAVLTLLLAGYLAQ 23 PRIMARY 23 2 29 PTPKVIGIDLGTTYCSVGVFFPG 51 SECONDARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_008879 471 601100 100.0 100.0 NP_005518 641 140559 39.3 90.2 NP_002146 643 140555 39.0 89.4 NP_005337 641 603012 39.5 90.2 NP_005336 641 140550 39.5 90.2 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDB0037 Download

>KIBB0037  1413 bp
ATGGCCAGAGAGATGACGATCTTAGGATCGGCTGTTTTGACTCTCCTGTTGGCCGGCTAT
TTGGCACAACAGTATTTACCATTGCCTACTCCTAAAGTGATTGGTATTGATCTTGGCACC
ACCTATTGTTCTGTTGGGGTGTTTTTTCCTGGCACAGGAAAAGTAAAGGTGATTCCAGAT
GAAAATGGGCATATCAGCATACCCAGCATGGTGTCTTTTACTGACAATGATGTATATGTG
GGATATGAAAGCGTAGAGCTGGCAGATTCAAATCCTCAAAACACAATATATGATGCCAAA
AGATTCATAGGCAAGATTTTTACCGCAGAAGAGTTGGAGGCTGAAATTGGCAGATACCCA
TTTAAGGTTTTAAACAAAAATGGAATGGTTGAGTTTTCTGTGACAAGTAATGAGACCATC
ACAGTGTCCCCAGAATATGTTGGCTCTCGACTATTGTTGAAGTTAAAGGAAATGGCAGAG
GCATATCTTGGAATGCCAGTTGCCAATGCTGTCATTTCTGTACCAGCAGAATTTGATCTA
AAACAGAGAAATTCAACAATTGAAGCTGCTAACCTTGCAGGACTGAAGATTTTGAGGGTA
ATAAATGAACCCACAGCAGCAGCTATGGCCTATGGTCTCCACAAGGCTGACGTCTTCCAC
GTCTTGGTGATAGACTTGGGCGGAGGAACTCTAGATGTGTCTTTACTGAATAAACAAGGA
GGGATGTTTCTAACCCGAGCAATGTCTGGAAACAATAAACTTGGAGGACAGGACTTCAAT
CAGAGATTGCTTCAGTACTTATATAAACAGATCTATCAAACATATGGCTTCGTGCCCTCT
AGGAAAGAGGAAATCCACAGATTGAGACAAGCTGTGGAAATGGTCAAATTAAATCTGACT
CTTCATCAATCTGCTCAGTTGTCAGTATTACTAACGGTGGAGGAGCAGGACAGGAAGGAA
CCTCACAGTAGTGACACTGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGC
GTGAACAGTGGGTTTGGACGTGGCCTTTCTGATAAGAAAAGTGGAGAAAGTCAGGTTTTA
TTTGAAACAGAAATATCACGGAAACTCTTTGATACCCTTAATGAAGACCTCTTTCAGAAA
ATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAGATTGAT
GAGGTGGTTTTAGTTGGGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAG
TTCTTTGGAAAAGATCCCAACACATCTGTAGACCCTGACCTAGCAGTAGTAACGGGAGTG
GCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATT
CCCAATAAGCATTTACAAAAAACCAACTTCAAC

ORF Protein

Cloned ORF protein sequence for pF1KSDB0037 Download

>KIBB0037  471 aa
MAREMTILGSAVLTLLLAGYLAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPD
ENGHISIPSMVSFTDNDVYVGYESVELADSNPQNTIYDAKRFIGKIFTAEELEAEIGRYP
FKVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEAYLGMPVANAVISVPAEFDL
KQRNSTIEAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQG
GMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQTYGFVPSRKEEIHRLRQAVEMVKLNLT
LHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNSGFGRGLSDKKSGESQVL
FETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQE
FFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPNKHLQKTNFN

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDB0037 Download

>pF1KSDB0037  4552 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGCCAGAGAGATGACGATCTTAGGATCGGCTGTTTTGACTCTCCTGTTGGCC
GGCTATTTGGCACAACAGTATTTACCATTGCCTACTCCTAAAGTGATTGGTATTGATCTT
GGCACCACCTATTGTTCTGTTGGGGTGTTTTTTCCTGGCACAGGAAAAGTAAAGGTGATT
CCAGATGAAAATGGGCATATCAGCATACCCAGCATGGTGTCTTTTACTGACAATGATGTA
TATGTGGGATATGAAAGCGTAGAGCTGGCAGATTCAAATCCTCAAAACACAATATATGAT
GCCAAAAGATTCATAGGCAAGATTTTTACCGCAGAAGAGTTGGAGGCTGAAATTGGCAGA
TACCCATTTAAGGTTTTAAACAAAAATGGAATGGTTGAGTTTTCTGTGACAAGTAATGAG
ACCATCACAGTGTCCCCAGAATATGTTGGCTCTCGACTATTGTTGAAGTTAAAGGAAATG
GCAGAGGCATATCTTGGAATGCCAGTTGCCAATGCTGTCATTTCTGTACCAGCAGAATTT
GATCTAAAACAGAGAAATTCAACAATTGAAGCTGCTAACCTTGCAGGACTGAAGATTTTG
AGGGTAATAAATGAACCCACAGCAGCAGCTATGGCCTATGGTCTCCACAAGGCTGACGTC
TTCCACGTCTTGGTGATAGACTTGGGCGGAGGAACTCTAGATGTGTCTTTACTGAATAAA
CAAGGAGGGATGTTTCTAACCCGAGCAATGTCTGGAAACAATAAACTTGGAGGACAGGAC
TTCAATCAGAGATTGCTTCAGTACTTATATAAACAGATCTATCAAACATATGGCTTCGTG
CCCTCTAGGAAAGAGGAAATCCACAGATTGAGACAAGCTGTGGAAATGGTCAAATTAAAT
CTGACTCTTCATCAATCTGCTCAGTTGTCAGTATTACTAACGGTGGAGGAGCAGGACAGG
AAGGAACCTCACAGTAGTGACACTGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGAC
CATCGCGTGAACAGTGGGTTTGGACGTGGCCTTTCTGATAAGAAAAGTGGAGAAAGTCAG
GTTTTATTTGAAACAGAAATATCACGGAAACTCTTTGATACCCTTAATGAAGACCTCTTT
CAGAAAATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAG
ATTGATGAGGTGGTTTTAGTTGGGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATT
CAAGAGTTCTTTGGAAAAGATCCCAACACATCTGTAGACCCTGACCTAGCAGTAGTAACG
GGAGTGGCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTTA
GAAATTCCCAATAAGCATTTACAAAAAACCAACTTCAACTACGTAGTTTAAACGAATTCG
AGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGC
TAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATA
ACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATC
CGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCA
AGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGAC
ATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTA
GCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGG
GCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCA
AGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGC
ATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTC
GGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCA
GCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTG
CAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTG
CTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAG
GATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATG
CGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGC
ATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAA
GAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGAT
GGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAAT
GGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGAC
ATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTC
CTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTT
GACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCAAGCGACGCCCAA
CCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCA
GGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTG
CTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGT
CAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCC
CTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCT
TCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTC
GTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTA
TCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCA
GCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAG
TGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAG
CCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGT
AGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAA
GATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGG
ATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAAT
ACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCT
TCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACG
GTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACC
TGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATG
GTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCAC
GATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGC
AGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGAC
CCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCAT
GCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGC
CTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGG
AGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATA
AACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCT
ACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT