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SpecieshumanProduct IDFXC00968Cloning SiteSgfI-PmeISymbolZNF154
Alias : pHZ-92Descriptionzinc finger protein 154, transcript variant 1
Length: 1311 bp
Restriction map A
Restriction map B
Genomic Structure
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Length: 437 aa
Result of homology search against CCDS protein database (
FASTA output,
Multiple alignment)
Entry Exp ID% symbol CCDS42639.1 1.3e-89 99.8 ZNF154 CCDS12966.1 4.1e-51 63.2 ZNF256 CCDS58688.1 7.2e-48 61.7 ZNF211 CCDS58687.1 7.5e-48 61.7 ZNF211 CCDS12957.1 7.5e-48 61.7 ZNF211
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
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Result of InterProScan
Search method interpro_ID From To Entry Definition HMMPfam IPR001909 14 54 PF01352 Krueppel-associated box IPR007087 161 183 PF00096 Zinc finger IPR007087 189 211 PF00096 Zinc finger IPR007087 217 239 PF00096 Zinc finger IPR007087 245 267 PF00096 Zinc finger IPR007087 273 295 PF00096 Zinc finger IPR007087 301 323 PF00096 Zinc finger IPR007087 329 351 PF00096 Zinc finger IPR007087 357 379 PF00096 Zinc finger IPR007087 385 407 PF00096 Zinc finger IPR007087 413 435 PF00096 Zinc finger HMMSmart IPR001909 14 79 SM00349 Krueppel-associated box IPR015880 161 183 SM00355 Zinc finger IPR015880 189 211 SM00355 Zinc finger IPR015880 217 239 SM00355 Zinc finger IPR015880 245 267 SM00355 Zinc finger IPR015880 273 295 SM00355 Zinc finger IPR015880 301 323 SM00355 Zinc finger IPR015880 329 351 SM00355 Zinc finger IPR015880 357 379 SM00355 Zinc finger IPR015880 385 407 SM00355 Zinc finger IPR015880 413 435 SM00355 Zinc finger ProfileScan IPR001909 14 88 PS50805 Krueppel-associated box IPR007087 161 188 PS50157 Zinc finger IPR007087 189 216 PS50157 Zinc finger IPR007087 217 244 PS50157 Zinc finger IPR007087 245 272 PS50157 Zinc finger IPR007087 273 300 PS50157 Zinc finger IPR007087 301 328 PS50157 Zinc finger IPR007087 329 356 PS50157 Zinc finger IPR007087 357 384 PS50157 Zinc finger IPR007087 385 412 PS50157 Zinc finger IPR007087 413 437 PS50157 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output,
Multiple alignment)
H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_001078853 437 604085 99.8 100.0 NP_005764 627 606956 63.2 91.3 XP_016881627 474 606956 64.9 82.8 NP_001252529 503 601856 61.7 87.2 NP_001252528 555 601856 61.7 87.2 Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.comCloned ORF Nucleotide sequence for pF1KSDA2003 Download>KIAA2003 1311 bp ATGGCAGCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTGACCTTTGAAGATGTGGCC GTACACTTCTCCTGGGAGGAATGGGGTCTCCTTGATGAGGCTCAAAGATGCCTGTACCGT GATGTGATGCTGGAGAACTTGGCTCTTTTAACCTCTCTAGATGTTCATCGTCAGAAGCAG CACCTTGGAGAAAAACATTTCAGAAGCAATGTGGGCAGAGCCTTGTTTGTGAAGACCTGC ACATTCCATGTGTCAGGGGAGCCTTCCACCTGCAGAGAAGTTGGGAAGGACTTCCTGGCC AAGTTGGGATTTCTCCATCAACAGGCTGCTCACACTGGGGAGCAATCAAATAGCAAAAGC GACGGTGGGGCCATCAGTCACAGAGGAAAAACTCATTACAACTGTGGAGAACACACAAAA GCATTCAGCGGTAAACACACACTTGTTCAGCAGCAGAGAACCCTCACTACAGAAAGATGT TACATATGCAGTGAATGTGGGAAATCCTTTAGCAAAAGCTACAGTCTCAATGACCATTGG AGACTTCACACTGGAGAAAAGCCTTATGAATGTCGAGAGTGTGGGAAGTCCTTTAGGCAA AGCTCTAGTCTCATTCAGCACCGGAGAGTTCACACTGCAGTACGACCTCATGAATGTGAT GAATGTGGAAAATTATTTAGCAACAAGTCTAACCTCATTAAACATCGGAGAGTTCACACT GGGGAAAGGCCATATGAGTGCAGTGAATGTGGGAAATCCTTTAGCCAAAGGTCTGCACTC CTTCAACATCGGGGAGTTCACACTGGGGAGAGGCCTTATGAGTGCAGTGAATGTGGGAAG TTTTTTACATATCATTCCAGTCTCATAAAACACCAGAAAGTTCACAGTGGATCCAGGCCT TATGAGTGCAGCGAATGTGGGAAGTCATTTAGCCAAAACTCTAGCCTCATTGAACACCAT AGGGTTCACACTGGAGAAAGGCCTTATAAGTGCAGCGAATGTGGGAAATCCTTTAGCCAA AGGTCTGCACTCCTTCAACATCGGGGAGTTCACACTGGGGAGAGGCCTTATGAGTGCAGT GAATGTGGGAAGTTCTTTCCCTACAGCTCCAGTCTCCGAAAACACCAGAGAGTTCACACT GGATCAAGACCCTATGAGTGCAGTGAATGTGGGAAATCCTTTACTCAAAATTCCGGCCTC ATTAAGCACAGGAGGGTTCACACTGGGGAGAAGCCTTATGAGTGCACGGAATGTGGGAAA TCCTTTAGCCATAACTCCAGCCTTATTAAACATCAGAGAATTCATAGTCGA
Cloned ORF protein sequence for pF1KSDA2003 Download>KIAA2003 437 aa MAAATLRTPTQGTVTFEDVAVHFSWEEWGLLDEAQRCLYRDVMLENLALLTSLDVHRQKQ HLGEKHFRSNVGRALFVKTCTFHVSGEPSTCREVGKDFLAKLGFLHQQAAHTGEQSNSKS DGGAISHRGKTHYNCGEHTKAFSGKHTLVQQQRTLTTERCYICSECGKSFSKSYSLNDHW RLHTGEKPYECRECGKSFRQSSSLIQHRRVHTAVRPHECDECGKLFSNKSNLIKHRRVHT GERPYECSECGKSFSQRSALLQHRGVHTGERPYECSECGKFFTYHSSLIKHQKVHSGSRP YECSECGKSFSQNSSLIEHHRVHTGERPYKCSECGKSFSQRSALLQHRGVHTGERPYECS ECGKFFPYSSSLRKHQRVHTGSRPYECSECGKSFTQNSGLIKHRRVHTGEKPYECTECGK SFSHNSSLIKHQRIHSR
Nucleotide Sequence (with vector) for pF1KSDA2003 Download>pF1KSDA2003 4448 bp GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT AGAACCATGGCAGCGGCCACTCTGAGGACGCCAACTCAGGGCACTGTGACCTTTGAAGAT GTGGCCGTACACTTCTCCTGGGAGGAATGGGGTCTCCTTGATGAGGCTCAAAGATGCCTG TACCGTGATGTGATGCTGGAGAACTTGGCTCTTTTAACCTCTCTAGATGTTCATCGTCAG AAGCAGCACCTTGGAGAAAAACATTTCAGAAGCAATGTGGGCAGAGCCTTGTTTGTGAAG ACCTGCACATTCCATGTGTCAGGGGAGCCTTCCACCTGCAGAGAAGTTGGGAAGGACTTC CTGGCCAAGTTGGGATTTCTCCATCAACAGGCTGCTCACACTGGGGAGCAATCAAATAGC AAAAGCGACGGTGGGGCCATCAGTCACAGAGGAAAAACTCATTACAACTGTGGAGAACAC ACAAAAGCATTCAGCGGTAAACACACACTTGTTCAGCAGCAGAGAACCCTCACTACAGAA AGATGTTACATATGCAGTGAATGTGGGAAATCCTTTAGCAAAAGCTACAGTCTCAATGAC CATTGGAGACTTCACACTGGAGAAAAGCCTTATGAATGTCGAGAGTGTGGGAAGTCCTTT AGGCAAAGCTCTAGTCTCATTCAGCACCGGAGAGTTCACACTGCAGTACGACCTCATGAA TGTGATGAATGTGGAAAATTATTTAGCAACAAGTCTAACCTCATTAAACATCGGAGAGTT CACACTGGGGAAAGGCCATATGAGTGCAGTGAATGTGGGAAATCCTTTAGCCAAAGGTCT GCACTCCTTCAACATCGGGGAGTTCACACTGGGGAGAGGCCTTATGAGTGCAGTGAATGT GGGAAGTTTTTTACATATCATTCCAGTCTCATAAAACACCAGAAAGTTCACAGTGGATCC AGGCCTTATGAGTGCAGCGAATGTGGGAAGTCATTTAGCCAAAACTCTAGCCTCATTGAA CACCATAGGGTTCACACTGGAGAAAGGCCTTATAAGTGCAGCGAATGTGGGAAATCCTTT AGCCAAAGGTCTGCACTCCTTCAACATCGGGGAGTTCACACTGGGGAGAGGCCTTATGAG TGCAGTGAATGTGGGAAGTTCTTTCCCTACAGCTCCAGTCTCCGAAAACACCAGAGAGTT CACACTGGATCAAGACCCTATGAGTGCAGTGAATGTGGGAAATCCTTTACTCAAAATTCC GGCCTCATTAAGCACAGGAGGGTTCACACTGGGGAGAAGCCTTATGAGTGCACGGAATGT GGGAAATCCTTTAGCCATAACTCCAGCCTTATTAAACATCAGAGAATTCATAGTCGATAC GTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCAT GCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGC TGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCT GAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCG CCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCA GATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTA CGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCA AAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGG ATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACA GGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCT TGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCC GCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCC GGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGC GTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTG GGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCC ATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGAC CACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGAT CAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTC AAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCG AATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTG GCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGC GAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATC GCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGAAATGACCG ACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGA ATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCG TAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAA AAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTT TCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCT GTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCT CAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCC CGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTT ATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGC TACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTAT CTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAA ACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAA AAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGA AAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCT TTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACC ATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTG CATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTT TGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTA CAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACC GCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACA GATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGC GGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAG TGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTC AGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTA GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGG CAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATG GCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTAT CCGCTCAT
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