GPR83 ORF clone FXC00859

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Flexi ORF Clone FXC00859

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Clone info.

Species

human

Clone Name

pF1KSDA1540 Sequence (with vector) Restriction Map

Product ID

FXC00859

HaloTag Clone PID

FHC00859

ORF Sequence

DNA sequence (1269 bp)
Protein sequence (423 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384231]

Gene

KIAA1540

Symbol

GPR83

Alias : GIR, GPR72

Description

G protein-coupled receptor 83

Original Clone ID

fj00652

Features of the cloned ORF sequence

Description

Length: 1269 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 423 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS8297.1 5.2e-135 99.8 GPR83 CCDS81616.1 2.4e-79 89.8 GPR83 CCDS7606.1 7.7e-27 36.3 PRLHR CCDS1958.1 1.6e-26 34.3 TACR1 CCDS3664.1 7.8e-26 33.8 TACR3 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition FPrintScan IPR000276 73 97 PR00237 GPCR IPR000611 98 110 PR01012 Neuropeptide Y receptor IPR000276 106 127 PR00237 GPCR IPR000611 128 140 PR01012 Neuropeptide Y receptor IPR000276 151 173 PR00237 GPCR IPR000611 151 166 PR01012 Neuropeptide Y receptor IPR000276 185 206 PR00237 GPCR IPR000276 240 263 PR00237 GPCR IPR000276 290 314 PR00237 GPCR IPR000276 327 353 PR00237 GPCR IPR000611 332 341 PR01012 Neuropeptide Y receptor IPR000611 343 356 PR01012 Neuropeptide Y receptor HMMPfam IPR000276 88 345 PF00001 GPCR ProfileScan IPR017452 88 345 PS50262 GPCR
Prediction of transmembrane (TM) segments Method No. N terminal transmembrane region C terminal type length SOSUI2 1 1 MVPHLLLLCLLPLVRATEPH 20 SECONDARY 20 2 72 ALLIVAYSFIIVFSLFGNVLVCH 94 PRIMARY 23 3 114 AVADIMITLLNTPFTLVRFVNST 136 SECONDARY 23 4 186 GVIYIAVIWTMATFFSLPHAICQ 208 SECONDARY 23 5 240 DLATFILLYILPLLIISVAYARV 262 PRIMARY 23 6 294 LMLVVVLFALCWFPLNCYVLLLS 316 PRIMARY 23
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_057624 423 605569 99.8 100.0 NP_001317274 381 605569 89.8 100.0 NP_001048 398 162321 31.4 80.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1540 Download

>KIAA1540  1269 bp
ATGGTCCCTCACCTCTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAGCCCCAC
GAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGTGCCCAATGCCTCGCAC
TTCTTCTCTTGGAACAACTACACCTTCTCCGACTGGCAGAACTTTGTGGGCAGGAGGCGC
TACGGCGCTGAGTCCCAGAACCCCACGGTGAAAGCCCTGCTCATTGTGGCTTACTCCTTC
ATCATTGTCTTCTCACTCTTTGGCAACGTCCTGGTCTGTCATGTCATCTTCAAGAACCAG
CGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATAATGATC
ACGCTGCTCAACACCCCCTTCACTTTGGTTCGCTTTGTGAACAGCACATGGATATTTGGG
AAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCAGCACTG
ACACTGACAGCCATTGCGGTGGATCGCCACCAGGTCATCATGCACCCCTTGAAACCCCGG
ATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGGACCATGGCTACGTTCTTT
TCACTCCCACATGCTATCTGCCAGAAATTATTTACCTTCAAATACAGTGAGGACATTGTG
CGCTCCCTCTGCCTGCCAGACTTCCCTGAGCCAGCTGACCTCTTCTGGAAGTACCTGGAC
TTGGCCACCTTCATCCTGCTCTACATCCTGCCCCTCCTCATCATCTCTGTGGCCTACGCT
CGTGTGGCCAAGAAACTGTGGCTGTGTAATATGATTGGCGATGTGACCACAGAGCAGTAC
TTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTAGTCCTC
TTTGCCCTCTGCTGGTTCCCCCTCAACTGCTACGTCCTCCTCCTGTCCAGCAAGGTCATC
CGCACCAACAATGCCCTCTACTTTGCCTTCCACTGGTTTGCCATGAGCAGCACCTGCTAT
AACCCCTTCATATACTGCTGGCTGAACGAGAACTTCAGGATTGAGCTAAAGGCATTACTG
AGCATGTGTCAAAGACCTCCCAAGCCTCAGGAGGACAGGCAACCCTCCCCAGTTCCTTCC
TTCAGGGTGGCCTGGACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGCCAATAACCTC
CTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCCATTGTG
ACGATGAGT

ORF Protein

Cloned ORF protein sequence for pF1KSDA1540 Download

>KIAA1540  423 aa
MVPHLLLLCLLPLVRATEPHEGRADEQSAEAALAVPNASHFFSWNNYTFSDWQNFVGRRR
YGAESQNPTVKALLIVAYSFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMI
TLLNTPFTLVRFVNSTWIFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPR
ISITKGVIYIAVIWTMATFFSLPHAICQKLFTFKYSEDIVRSLCLPDFPEPADLFWKYLD
LATFILLYILPLLIISVAYARVAKKLWLCNMIGDVTTEQYFALRRKKKKTIKMLMLVVVL
FALCWFPLNCYVLLLSSKVIRTNNALYFAFHWFAMSSTCYNPFIYCWLNENFRIELKALL
SMCQRPPKPQEDRQPSPVPSFRVAWTEKNDGQRAPLANNLLPTSQLQSGKTDLSSVEPIV
TMS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1540 Download

>pF1KSDA1540  4406 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGTCCCTCACCTCTTGCTGCTCTGTCTCCTCCCCTTGGTGCGAGCCACCGAG
CCCCACGAGGGCCGGGCCGACGAGCAGAGCGCGGAGGCGGCCCTGGCCGTGCCCAATGCC
TCGCACTTCTTCTCTTGGAACAACTACACCTTCTCCGACTGGCAGAACTTTGTGGGCAGG
AGGCGCTACGGCGCTGAGTCCCAGAACCCCACGGTGAAAGCCCTGCTCATTGTGGCTTAC
TCCTTCATCATTGTCTTCTCACTCTTTGGCAACGTCCTGGTCTGTCATGTCATCTTCAAG
AACCAGCGAATGCACTCGGCCACCAGCCTCTTCATCGTCAACCTGGCAGTTGCCGACATA
ATGATCACGCTGCTCAACACCCCCTTCACTTTGGTTCGCTTTGTGAACAGCACATGGATA
TTTGGGAAGGGCATGTGCCATGTCAGCCGCTTTGCCCAGTACTGCTCACTGCACGTCTCA
GCACTGACACTGACAGCCATTGCGGTGGATCGCCACCAGGTCATCATGCACCCCTTGAAA
CCCCGGATCTCAATCACAAAGGGTGTCATCTACATCGCTGTCATCTGGACCATGGCTACG
TTCTTTTCACTCCCACATGCTATCTGCCAGAAATTATTTACCTTCAAATACAGTGAGGAC
ATTGTGCGCTCCCTCTGCCTGCCAGACTTCCCTGAGCCAGCTGACCTCTTCTGGAAGTAC
CTGGACTTGGCCACCTTCATCCTGCTCTACATCCTGCCCCTCCTCATCATCTCTGTGGCC
TACGCTCGTGTGGCCAAGAAACTGTGGCTGTGTAATATGATTGGCGATGTGACCACAGAG
CAGTACTTTGCCCTGCGGCGCAAAAAGAAGAAGACCATCAAGATGTTGATGCTGGTGGTA
GTCCTCTTTGCCCTCTGCTGGTTCCCCCTCAACTGCTACGTCCTCCTCCTGTCCAGCAAG
GTCATCCGCACCAACAATGCCCTCTACTTTGCCTTCCACTGGTTTGCCATGAGCAGCACC
TGCTATAACCCCTTCATATACTGCTGGCTGAACGAGAACTTCAGGATTGAGCTAAAGGCA
TTACTGAGCATGTGTCAAAGACCTCCCAAGCCTCAGGAGGACAGGCAACCCTCCCCAGTT
CCTTCCTTCAGGGTGGCCTGGACAGAGAAGAATGATGGCCAGAGGGCTCCCCTTGCCAAT
AACCTCCTGCCCACCTCCCAACTCCAGTCTGGGAAGACAGACCTGTCATCTGTGGAACCC
ATTGTGACGATGAGTTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTA
GAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGA
GTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGT
CTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAAC
CGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCT
TGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTT
CTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTT
GCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAG
CCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCA
AGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCAC
GCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACA
ATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTT
GTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCG
TGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGA
AGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCT
CCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCG
GCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATG
GAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCC
GAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCAT
GGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGAC
TGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATT
GCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCT
CCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTC
TGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGT
AATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCA
GCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCC
CCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACT
ATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCT
GCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAG
CTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCA
CGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAA
CCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGC
GAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAG
AAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGG
TAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCA
GCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTC
TGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAG
GATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTT
CGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTG
GCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCG
GCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAAC
GCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCG
TAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGA
TCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTT
GCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACG
CCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATC
AAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGG
TGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAAC
GGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGA
AGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAA
ATACATTCAAATATGTATCCGCTCAT