PNKD ORF clone FXC00756

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Flexi ORF Clone FXC00756

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Clone info.

Species

human

Clone Name

pF1KSDA1184 Sequence (with vector) Restriction Map

Product ID

FXC00756

HaloTag Clone PID

FHC00756

ORF Sequence

DNA sequence (1155 bp)
Protein sequence (385 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384130]

Gene

KIAA1184

Symbol

PNKD

Alias : BRP17, DYT8, FKSG19, FPD1, KIPP1184, MR-1, MR-1S, MR1, PDC, PKND1, PNKD1, R1, TAHCCP2

Description

paroxysmal nonkinesigenic dyskinesia, transcript variant 1

Original Clone ID

hg01696a

Features of the cloned ORF sequence

Description

Length: 1155 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 385 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS2411.1 3.7e-172 100.0 PNKD CCDS2413.1 2.1e-137 100.0 PNKD CCDS32366.1 1e-37 40.6 HAGH CCDS10447.2 1.2e-37 40.6 HAGH CCDS32354.1 1.8e-33 43.8 HAGHL The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001279 127 291 PF00753 Beta-lactamase-like HMMSmart IPR001279 129 291 SM00849 Beta-lactamase-like HMMTigr IPR017782 122 381 TIGR03413 Hydroxyacylglutathione hydrolase
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056303 385 118800,609023 100.0 100.0 XP_016859260 356 118800,609023 92.5 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA1184 Download

>KIAA1184  1155 bp
ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTC
CTCCGGGGGATTCTCGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCC
CTGCAAAGCCACAGCTCCCCAGAGGGCAAGGAGGAACCTGAACCCCTATCCCCGGAGCTG
GAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCTGTGGGACTGGCCTGGTAC
AGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAGGGCT
CGGAATCGCTACCCTAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCAATGGAGTGAAG
GTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCGACACCCAGGCC
CAGCTGGCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAG
GAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTGGAGGG
AACCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACGGC
ATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGGTCAGCGTGGGACGGCTTCAG
ATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTACTGGATGGG
GAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTGT
GGGCGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGG
CTAGGGGATGACACCCTTCTGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGCTTT
GCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGG
CAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCCTACAAC
CCGTTCCTGAGAACCCACTGCCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGGGCCCC
ACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTGAAGGAT
ATGCACAAGAGCAAG

ORF Protein

Cloned ORF protein sequence for pF1KSDA1184 Download

>KIAA1184  385 aa
MAAVVAATALKGRGARNARVLRGILAGATANKASHNRTRALQSHSSPEGKEEPEPLSPEL
EYIPRKRGKNPMKAVGLAWYSLYTRTWLGYLFYRQQLRRARNRYPKGHSKTQPRLFNGVK
VLPIPVLSDNYSYLIIDTQAQLAVAVDPSDPRAVQASIEKEGVTLVAILCTHKHWDHSGG
NRDLSRRHRDCRVYGSPQDGIPYLTHPLCHQDVVSVGRLQIRALATPGHTQGHLVYLLDG
EPYKGPSCLFSGDLLFLSGCGRTFEGNAETMLSSLDTVLGLGDDTLLWPGHEYAEENLGF
AGVVEPENLARERKMQWVQRQRLERKGTCPSTLGEERSYNPFLRTHCLALQEALGPGPGP
TGDDDYSRAQLLEELRRLKDMHKSK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA1184 Download

>pF1KSDA1184  4292 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCC
CGCGTCCTCCGGGGGATTCTCGCAGGAGCCACAGCTAACAAGGCTTCTCATAACAGGACC
CGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCAAGGAGGAACCTGAACCCCTATCCCCG
GAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCTGTGGGACTGGCC
TGGTACAGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGC
AGGGCTCGGAATCGCTACCCTAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCAATGGA
GTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACCTCATCATCGACACC
CAGGCCCAGCTGGCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATT
GAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGT
GGAGGGAACCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGTGTACGGGAGCCCTCAG
GACGGCATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGGTCAGCGTGGGACGG
CTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTACTG
GATGGGGAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCT
GGCTGTGGGCGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGGACACTGTG
CTGGGGCTAGGGGATGACACCCTTCTGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTG
GGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGCAGTGGGTG
CAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCC
TACAACCCGTTCCTGAGAACCCACTGCCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCG
GGCCCCACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAGAGCTCCGCCGGCTG
AAGGATATGCACAAGAGCAAGTACGTAGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGCTCACTCAAA
GGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACATGTGAGCAAA
AGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTTCCATAGGCT
CCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCGAAACCCGAC
AGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCC
GACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTC
TCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTG
TGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTATCGTCTTGA
GTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACAGGATTAG
CAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAACTACGGCTA
CACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTTCGGAAAAAG
AGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTTTTTTGTTTG
CAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGATCTTTTCTAC
GGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCATGAGATTATC
AAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT