VPS39 ORF clone FXC00631

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Flexi ORF Clone FXC00631

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Clone info.

Species

human

Clone Name

pF1KSDA0770 Sequence (with vector) Restriction Map

Product ID

FXC00631

HaloTag Clone PID

FHC00631

ORF Sequence

DNA sequence (2625 bp)
Protein sequence (875 aa)

Linker Type

Flexi_RBS type

more Linker info

Vector Type

pF1KM Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB383984]

Gene

KIAA0770

Symbol

VPS39

Alias : TLP, VAM6, hVam6p

Description

vacuolar protein sorting 39 homolog (S. cerevisiae), transcript variant 2

Original Clone ID

hk05040s1

Features of the cloned ORF sequence

Description

Length: 2625 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 875 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10083.1 0 100.0 VPS39 CCDS73710.1 0 98.6 VPS39 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR001180 20 279 PF00780 Citron-like IPR019452 449 551 PF10366 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1 IPR019453 761 868 PF10367 Vacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2 HMMSmart IPR001180 10 289 SM00036 Citron-like ProfileScan IPR001180 15 283 PS50219 Citron-like
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056104 875 612188 100.0 100.0 XP_016877526 860 612188 100.0 97.1 XP_011519706 896 612188 100.0 97.1 NP_001288067 886 612188 98.6 100.0 XP_016877525 871 612188 98.6 97.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KSDA0770 Download

>KIAA0770  2625 bp
ATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAAAGCTGCCTCTGCAAATCGACTGT
CTGGCTGCCTGGGAGGAATGGCTTCTTGTGGGAACCAAACAAGGACATCTTCTTCTCTAT
AGGATTCGGAAGGACGTTGGTTGCAACAGATTTGAAGTGACACTAGAGAAATCCAATAAG
AACTTCTCCAAAAAGATTCAGCAGATCCATGTGGTTTCCCAGTTTAAGATTCTGGTCAGC
TTGTTAGAAAATAACATTTATGTCCATGACCTATTGACATTTCAACAAATCACTACGGTT
TCAAAGGCAAAGGGAGCATCACTGTTTACTTGTGACCTCCAGCACACAGAGACCGGTGAG
GAGGTGTTACGGATGTGTGTGGCAGTAAAAAAGAAGCTGCAGCTCTATTTCTGGAAGGAC
AGGGAATTTCATGAATTGCAGGGGGACTTTAGTGTGCCAGATGTGCCCAAGTCCATGGCG
TGGTGTGAAAATTCTATCTGTGTGGGTTTCAAGAGAGACTACTACCTAATAAGGGTGGAT
GGAAAGGGGTCCATCAAAGAGCTCTTTCCAACAGGAAAACAGCTGGAGCCCTTAGTTGCA
CCTCTGGCAGATGGAAAAGTGGCTGTGGGCCAGGATGATCTCACCGTGGTACTCAATGAG
GAAGGGATCTGCACACAGAAATGTGCCCTGAACTGGACGGACATACCAGTGGCCATGGAG
CACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACATTTGAA
CCGAGGCTTCTGGTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCATTACCTCAGGAGGA
TCAAACATTATCTATGTGGCCAGCAATCATTTTGTTTGGAGACTCATCCCTGTCCCCATG
GCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCA
GAAATGAAAGATGATTCTGACAGTGAAAAGCAGCAACAAATTCATCACATCAAGAACTTG
TATGCCTTCAACCTCTTCTGCCAGAAGCGTTTTGATGAGTCCATGCAGGTCTTTGCTAAA
CTTGGCACAGATCCCACCCATGTGATGGGCCTGTACCCTGACCTGCTGCCCACAGACTAC
AGAAAGCAGTTGCAGTATCCCAACCCATTGCCTGTGCTCTCCGGGGCTGAATTGGAGAAG
GCTCACTTAGCTCTGATTGACTACCTGACACAGAAACGAAGTCAATTGGTAAAGAAGCTG
AATGACTCTGATCACCAGTCAAGCACCTCACCGCTCATGGAAGGCACTCCCACCATCAAA
TCCAAGAAGAAGCTGCTACAAATCATCGACACCACCCTGCTCAAGTGCTATCTCCATACA
AATGTGGCCCTGGTGGCCCCCTTGCTACGCCTGGAGAACAATCACTGCCACATCGAGGAG
AGCGAGCACGTGCTAAAGAAGGCTCACAAGTACAGTGAGCTTATCATCCTGTATGAGAAG
AAGGGGCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCCAACTCC
CCTCTGAAAGGCCACGAGAGGACAGTGCAGTATCTGCAGCATCTGGGCACAGAAAACCTG
CATTTGATTTTCTCCTACTCAGTGTGGGTGCTGAGAGACTTCCCAGAAGATGGCCTGAAG
ATATTTACTGAAGATCTCCCGGAAGTGGAGTCTCTGCCACGTGATCGAGTCCTCGGCTTC
TTAATAGAGAATTTTAAGGGTCTGGCTATTCCTTATCTGGAACACATCATCCATGTTTGG
GAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAGGTGCAA
GGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGCAAAACCCCAGTCCCAGCTGGA
GAGGAAGAGGGTGAGCTGGGAGAATACCGGCAAAAGCTCCTCATGTTCTTGGAGATTTCC
AGCTACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCTTTGATGGCCTCTTAGAAGAA
CGAGCTCTCCTGTTGGGGCGCATGGGGAAACATGAACAAGCTCTTTTCATTTATGTCCAC
ATCTTGAAGGATACAAGGATGGCTGAGGAGTACTGCCACAAACACTATGACCGAAACAAA
GATGGCAACAAAGATGTGTATCTGTCCCTGCTTCGGATGTACCTGTCGCCCCCCAGCATT
CACTGCCTGGGGCCAATCAAGCTGGAACTACTGGAGCCAAAAGCCAACCTCCAGGCCGCT
CTGCAGGTCCTCGAGCTACACCACAGCAAACTGGACACCACCAAGGCCCTCAACCTTCTG
CCAGCAAACACTCAGATCAATGACATACGCATCTTCCTGGAAAAGGTCTTGGAAGAAAAT
GCACAAAAGAAACGGTTCAATCAAGTGCTCAAGAACCTTCTCCATGCAGAATTCCTGAGG
GTCCAGGAAGAGCGGATTTTACACCAGCAGGTGAAGTGCATCATCACAGAGGAGAAGGTG
TGCATGGTGTGTAAGAAGAAGATTGGGAACAGTGCATTTGCAAGATACCCCAATGGAGTG
GTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACT

ORF Protein

Cloned ORF protein sequence for pF1KSDA0770 Download

>KIAA0770  875 aa
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDRNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT

ORF+Vector

Nucleotide Sequence (with vector) for pF1KSDA0770 Download

>pF1KSDA0770  5764 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCTTTCGAAGGAGAT
AGAACCATGCACGACGCTTTCGAGCCAGTGCCGATCCTAGAAAAGCTGCCTCTGCAAATC
GACTGTCTGGCTGCCTGGGAGGAATGGCTTCTTGTGGGAACCAAACAAGGACATCTTCTT
CTCTATAGGATTCGGAAGGACGTTGGTTGCAACAGATTTGAAGTGACACTAGAGAAATCC
AATAAGAACTTCTCCAAAAAGATTCAGCAGATCCATGTGGTTTCCCAGTTTAAGATTCTG
GTCAGCTTGTTAGAAAATAACATTTATGTCCATGACCTATTGACATTTCAACAAATCACT
ACGGTTTCAAAGGCAAAGGGAGCATCACTGTTTACTTGTGACCTCCAGCACACAGAGACC
GGTGAGGAGGTGTTACGGATGTGTGTGGCAGTAAAAAAGAAGCTGCAGCTCTATTTCTGG
AAGGACAGGGAATTTCATGAATTGCAGGGGGACTTTAGTGTGCCAGATGTGCCCAAGTCC
ATGGCGTGGTGTGAAAATTCTATCTGTGTGGGTTTCAAGAGAGACTACTACCTAATAAGG
GTGGATGGAAAGGGGTCCATCAAAGAGCTCTTTCCAACAGGAAAACAGCTGGAGCCCTTA
GTTGCACCTCTGGCAGATGGAAAAGTGGCTGTGGGCCAGGATGATCTCACCGTGGTACTC
AATGAGGAAGGGATCTGCACACAGAAATGTGCCCTGAACTGGACGGACATACCAGTGGCC
ATGGAGCACCAGCCTCCCTACATCATTGCAGTGTTGCCTCGATATGTTGAGATCCGAACA
TTTGAACCGAGGCTTCTGGTCCAAAGCATTGAATTGCAAAGGCCCCGTTTCATTACCTCA
GGAGGATCAAACATTATCTATGTGGCCAGCAATCATTTTGTTTGGAGACTCATCCCTGTC
CCCATGGCAACCCAAATCCAACAACTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAG
CTCGCAGAAATGAAAGATGATTCTGACAGTGAAAAGCAGCAACAAATTCATCACATCAAG
AACTTGTATGCCTTCAACCTCTTCTGCCAGAAGCGTTTTGATGAGTCCATGCAGGTCTTT
GCTAAACTTGGCACAGATCCCACCCATGTGATGGGCCTGTACCCTGACCTGCTGCCCACA
GACTACAGAAAGCAGTTGCAGTATCCCAACCCATTGCCTGTGCTCTCCGGGGCTGAATTG
GAGAAGGCTCACTTAGCTCTGATTGACTACCTGACACAGAAACGAAGTCAATTGGTAAAG
AAGCTGAATGACTCTGATCACCAGTCAAGCACCTCACCGCTCATGGAAGGCACTCCCACC
ATCAAATCCAAGAAGAAGCTGCTACAAATCATCGACACCACCCTGCTCAAGTGCTATCTC
CATACAAATGTGGCCCTGGTGGCCCCCTTGCTACGCCTGGAGAACAATCACTGCCACATC
GAGGAGAGCGAGCACGTGCTAAAGAAGGCTCACAAGTACAGTGAGCTTATCATCCTGTAT
GAGAAGAAGGGGCTCCACGAGAAAGCTCTGCAGGTGCTCGTGGACCAGTCCAAGAAAGCC
AACTCCCCTCTGAAAGGCCACGAGAGGACAGTGCAGTATCTGCAGCATCTGGGCACAGAA
AACCTGCATTTGATTTTCTCCTACTCAGTGTGGGTGCTGAGAGACTTCCCAGAAGATGGC
CTGAAGATATTTACTGAAGATCTCCCGGAAGTGGAGTCTCTGCCACGTGATCGAGTCCTC
GGCTTCTTAATAGAGAATTTTAAGGGTCTGGCTATTCCTTATCTGGAACACATCATCCAT
GTTTGGGAGGAGACAGGCTCTCGGTTCCACAACTGCCTGATCCAGCTATACTGTGAGAAG
GTGCAAGGTCTGATGAAGGAGTATCTCCTGTCCTTCCCTGCAGGCAAAACCCCAGTCCCA
GCTGGAGAGGAAGAGGGTGAGCTGGGAGAATACCGGCAAAAGCTCCTCATGTTCTTGGAG
ATTTCCAGCTACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCTTTGATGGCCTCTTA
GAAGAACGAGCTCTCCTGTTGGGGCGCATGGGGAAACATGAACAAGCTCTTTTCATTTAT
GTCCACATCTTGAAGGATACAAGGATGGCTGAGGAGTACTGCCACAAACACTATGACCGA
AACAAAGATGGCAACAAAGATGTGTATCTGTCCCTGCTTCGGATGTACCTGTCGCCCCCC
AGCATTCACTGCCTGGGGCCAATCAAGCTGGAACTACTGGAGCCAAAAGCCAACCTCCAG
GCCGCTCTGCAGGTCCTCGAGCTACACCACAGCAAACTGGACACCACCAAGGCCCTCAAC
CTTCTGCCAGCAAACACTCAGATCAATGACATACGCATCTTCCTGGAAAAGGTCTTGGAA
GAAAATGCACAAAAGAAACGGTTCAATCAAGTGCTCAAGAACCTTCTCCATGCAGAATTC
CTGAGGGTCCAGGAAGAGCGGATTTTACACCAGCAGGTGAAGTGCATCATCACAGAGGAG
AAGGTGTGCATGGTGTGTAAGAAGAAGATTGGGAACAGTGCATTTGCAAGATACCCCAAT
GGAGTGGTCGTCCATTACTTCTGTTCCAAAGAGGTAAACCCAGCTGACACTTACGTAGTT
TAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGC
TGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCA
ATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGG
AGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGT
AAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGC
CCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTT
CCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAA
TTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCT
TTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGA
CGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTG
GAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTG
TTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCC
CTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCT
TGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAA
GTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATG
GCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAA
GCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGAT
GATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCG
CGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATC
ATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGAC
CGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGG
GCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTC
TATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGTTCGCGAAATGACCGACCA
AGCGACGCCCAACCGGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCA
GGGGATAACGCAGGAAAGAACATGTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAA
AAGGCCGCGTTGCTGGCGTTTTTCCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAAT
CGACGCTCAAGTCAGAGGTGGCGAAACCCGACAGGACTATAAAGATACCAGGCGTTTCCC
CCTGGAAGCTCCCTCGTGCGCTCTCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCC
GCCTTTCTCCCTTCGGGAAGCGTGGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGT
TCGGTGTAGGTCGTTCGCTCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGAC
CGCTGCGCCTTATCCGGTAACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCG
CCACTGGCAGCAGCCACTGGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACA
GAGTTCTTGAAGTGGTGGCCTAACTACGGCTACACTAGAAGGACAGTATTTGGTATCTGC
GCTCTGCTGAAGCCAGTTACCTTCGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAA
ACCACCGCTGGTAGCGGTGGTTTTTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAA
GGATTTCAAGAAGATCCTTTGATCTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAAC
TCACGTTAAGGGATTTTGGTCATGAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTA
TAGTCCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGA
AAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATA
GGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTT
GCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAAT
TAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAG
TACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATT
AAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTG
GTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTG
GGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTC
GAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGAC
AAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGG
ACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCT
TTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGC
TCAT