MEX3B ORF clone FXC00307

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Flexi ORF Clone FXC00307

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Clone info.

Species

human

Clone Name

pF1KA2009 Sequence (with vector) Restriction Map

Product ID

FXC00307

HaloTag Clone PID

FHC00307

Original Clone PID

ORK00307

ORF Sequence

DNA sequence (1707 bp)
Protein sequence (569 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384660]

Gene

KIAA2009

Symbol

MEX3B

Alias : MEX-3B, RKHD3, RNF195

Description

mex-3 RNA binding family member B

Original Clone ID

fk03255

Features of the cloned ORF sequence

Description

Length: 1707 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 569 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10319.1 1.3e-121 100.0 MEX3B CCDS11951.2 8.1e-36 55.0 MEX3C CCDS32865.2 7e-32 53.3 MEX3D CCDS53377.1 4.5e-28 50.3 MEX3A The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR018111 68 127 PF00013 K Homology IPR018111 162 221 PF00013 K Homology HMMSmart IPR004087 64 132 SM00322 K Homology IPR004087 159 226 SM00322 K Homology IPR001841 518 557 SM00184 Zinc finger ProfileScan IPR004088 75 127 PS50084 K Homology IPR004088 160 221 PS50084 K Homology IPR001841 518 558 PS50089 Zinc finger
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_115622 569 611008 100.0 100.0 NP_057710 659 611005 55.0 100.0 XP_016855266 598 611009 53.3 89.6 NP_976049 651 611009 53.3 89.6 NP_001167589 666 611009 53.2 89.3 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA2009 Download

>KIAA2009  1707 bp
ATGCCCAGCTCGCTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGC
AGCAGCGGAGGGGGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAG
CTCTCCCTGCTGGGGCTGGACAGTGACGAGGGCGCCTCTCTGTACGACAGCGAGCCGCGC
AAGAAGAGCGTGAACATGACCGAGTGCGTGCCAGTACCCAGTTCTGAGCATGTCGCCGAG
ATCGTGGGGCGGCAAGGTTGTAAAATCAAAGCGCTGCGGGCGAAGACCAATACTTACATC
AAGACCCCAGTTCGCGGGGAGGAGCCTGTCTTTGTTGTGACGGGCAGGAAGGAGGATGTG
GCCATGGCTCGGAGGGAGATCATCTCTGCTGCCGAGCACTTCTCCATGATCCGCGCCTCC
CGGAATAAGAACACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCTGCCCGGGCAG
ACCACCATCCAAGTGCGGGTACCCTACCGCGTGGTGGGGCTCGTGGTGGGGCCCAAAGGC
GCCACAATCAAGCGCATCCAGCAGCAGACGCACACGTACATCGTGACGCCCAGCCGGGAT
AAGGAGCCGGTGTTCGAGGTGACCGGCATGCCAGAGAACGTGGATCGCGCTCGAGAGGAG
ATTGAGGCGCACATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAACGAC
TTCCACGCCAACGGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGC
CCAGGCAGCCTCTGGAGCAAGCCCACCCCCAGCATCACGCCCACCCCCGGCCGCAAGCCT
TTCTCTAGCTACCGCAACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTAT
TTCGGCGGCGGGACCAGCAGCAGCGCAGCGGCTACCCAGCGCCTGGCGGACTACAGCCCC
CCTAGCCCCGCCCTGAGCTTTGCGCACAACGGAAACAATAACAATAACGGCAATGGGTAC
ACCTACACAGCGGGGGGAGAAGCCTCAGTGCCATCCCCCGACGGCTGCCCCGAGCTGCAG
CCCACTTTTGACCCGGCTCCCGCTCCCCCACCTGGGGCACCACTTATCTGGGCCCAGTTC
GAGCGGTCCCCGGGAGGCGGACCTGCAGCTCCGGTATCTTCTTCCTGCTCTTCTTCTGCA
TCTTCGTCTGCTTCTTCCTCCTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCC
AACGCCAACCTGGGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGC
CTGTCTCCACCCTTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTG
CGCAGCGACCCGGGTGGAGGAGGCCTGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCA
CAGCTGCCTGGCTTGCAGCCGTCGGACACGTCGGGCTCCTCCTCTTCGTCCAGCTCCTCC
TCCAGCTCTTCATCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCCGTG
TGCTTCGAGAGCGAAGTGATTGCCGCGCTGGTGCCCTGTGGCCACAACCTCTTCTGCATG
GAGTGCGCCAATCGCATCTGTGAGAAGAGCGAGCCCGAGTGCCCGGTCTGCCACACCGCG
GTCACTCAGGCCATCCGCATCTTTTCT

ORF Protein

Cloned ORF protein sequence for pF1KA2009 Download

>KIAA2009  569 aa
MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPR
KKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDV
AMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKG
ATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDEND
FHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSY
FGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQ
PTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPS
NANLGLLVHRRLHPGTSCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGA
QLPGLQPSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCM
ECANRICEKSEPECPVCHTAVTQAIRIFS

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA2009 Download

>pF1KA2009  4820 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGCCCAGCTCG
CTGTTCGCAGACCTGGAGCGCAACGGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGAGGG
GGAGAGACCCTGGATGACCAAAGAGCCCTGCAGCTCGCGCTCGACCAGCTCTCCCTGCTG
GGGCTGGACAGTGACGAGGGCGCCTCTCTGTACGACAGCGAGCCGCGCAAGAAGAGCGTG
AACATGACCGAGTGCGTGCCAGTACCCAGTTCTGAGCATGTCGCCGAGATCGTGGGGCGG
CAAGGTTGTAAAATCAAAGCGCTGCGGGCGAAGACCAATACTTACATCAAGACCCCAGTT
CGCGGGGAGGAGCCTGTCTTTGTTGTGACGGGCAGGAAGGAGGATGTGGCCATGGCTCGG
AGGGAGATCATCTCTGCTGCCGAGCACTTCTCCATGATCCGCGCCTCCCGGAATAAGAAC
ACGGCACTCAACGGCGCGGTGCCTGGGCCGCCCAACCTGCCCGGGCAGACCACCATCCAA
GTGCGGGTACCCTACCGCGTGGTGGGGCTCGTGGTGGGGCCCAAAGGCGCCACAATCAAG
CGCATCCAGCAGCAGACGCACACGTACATCGTGACGCCCAGCCGGGATAAGGAGCCGGTG
TTCGAGGTGACCGGCATGCCAGAGAACGTGGATCGCGCTCGAGAGGAGATTGAGGCGCAC
ATTGCTCTGCGTACCGGCGGCATCATTGAGCTCACAGACGAGAACGACTTCCACGCCAAC
GGCACCGATGTGGGCTTCGATCTGCATCATGGGTCCGGCGGGTCCGGCCCAGGCAGCCTC
TGGAGCAAGCCCACCCCCAGCATCACGCCCACCCCCGGCCGCAAGCCTTTCTCTAGCTAC
CGCAACGACAGCTCCAGCTCGCTTGGCAGTGCTTCCACAGACTCTTATTTCGGCGGCGGG
ACCAGCAGCAGCGCAGCGGCTACCCAGCGCCTGGCGGACTACAGCCCCCCTAGCCCCGCC
CTGAGCTTTGCGCACAACGGAAACAATAACAATAACGGCAATGGGTACACCTACACAGCG
GGGGGAGAAGCCTCAGTGCCATCCCCCGACGGCTGCCCCGAGCTGCAGCCCACTTTTGAC
CCGGCTCCCGCTCCCCCACCTGGGGCACCACTTATCTGGGCCCAGTTCGAGCGGTCCCCG
GGAGGCGGACCTGCAGCTCCGGTATCTTCTTCCTGCTCTTCTTCTGCATCTTCGTCTGCT
TCTTCCTCCTCCGTGGTCTTCCCCGGGGGTGGCGCCAGTGCGCCCTCCAACGCCAACCTG
GGGCTATTGGTGCACCGCCGGCTGCACCCTGGCACCAGCTGCCCGCGCCTGTCTCCACCC
TTGCACATGGCCCCGGGGGCGGGAGAGCACCACCTGGCTCGCCGGGTGCGCAGCGACCCG
GGTGGAGGAGGCCTGGCCTACGCCGCTTATGCCAACGGGCTGGGGGCACAGCTGCCTGGC
TTGCAGCCGTCGGACACGTCGGGCTCCTCCTCTTCGTCCAGCTCCTCCTCCAGCTCTTCA
TCCTCTTCCTCCGGGCTTCGGCGTAAAGGCAGCCGCGACTGCTCCGTGTGCTTCGAGAGC
GAAGTGATTGCCGCGCTGGTGCCCTGTGGCCACAACCTCTTCTGCATGGAGTGCGCCAAT
CGCATCTGTGAGAAGAGCGAGCCCGAGTGCCCGGTCTGCCACACCGCGGTCACTCAGGCC
ATCCGCATCTTTTCTGTTTAAACGAATTCGAGCTCGGTACCCGGGGATCCTCTAGAGTCG
ACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGAAGCTGAGTTGGC
TGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAAACGGGTCTTGAG
GGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCATAAAACCGCCCA
GTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTTTGCGCTTGCGTT
TTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCACCGTTTCTGCGG
ACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGAGTGCTTGCGGCA
GCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTTGGGAAGCCCTGC
AAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGGGGATCAAGATCT
GATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGATTGCACGCAGGT
TCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAACAGACAATCGGC
TGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTTCTTTTTGTCAAG
ACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGGCTATCGTGGCTG
GCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAAGCGGGAAGGGAC
TGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCACCTTGCTCCTGCC
GAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTTGATCCGGCTACC
TGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACTCGGATGGAAGCC
GGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCGCCAGCCGAACTG
TTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTGACTCATGGCGAT
GCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTCATCGACTGTGGC
CGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGTGATATTGCTGAA
GAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATCGCCGCTCCCGAT
TCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCGGGACTCTGGGGT
TCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTAGGTGAAGATCCT
TTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGA
CCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCGCGTAATCTGCTG
CTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGATCAAGAGCTACC
AACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAATACTGTCCTTCT
AGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCCTACATACCTCGC
TCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTGTCTTACCGGGTT
GGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTG
CACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCT
ATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAG
GGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAG
TCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATGCTCGTCAGGGGG
GCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCTGGCCTTTTGCTG
GCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGATAACCGTATTAC
CGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATGGCCCTTCGCTGG
GATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGTAATGTGGCCTGT
ACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCGATTGCGGCAGTT
TTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCGCTGAACGCGTTT
TAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTGCCCTCGTAGCCA
TCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGATCGAGATCTTTT
CAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGG
CGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAG
CGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAA
AACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACG
CTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCG
GAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCA
TCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTTTTCTAAATACAT
TCAAATATGTATCCGCTCAT