GGA2 ORF clone FXC00175

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Flexi ORF Clone FXC00175

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Clone info.

Species

human

Clone Name

pF1KA1080 Sequence (with vector) Restriction Map

Product ID

FXC00175

HaloTag Clone PID

FHC00175

Original Clone PID

ORK00175

ORF Sequence

DNA sequence (1839 bp)
Protein sequence (613 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1KOF Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB384559]

Gene

KIAA1080

Symbol

GGA2

Alias : VEAR

Description

golgi-associated, gamma adaptin ear containing, ARF binding protein 2

Original Clone ID

ee06815

Features of the cloned ORF sequence

Description

Length: 1839 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 613 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS10611.1 3.9e-183 99.8 GGA2 CCDS13951.1 3.7e-51 47.8 GGA1 CCDS11717.1 1.9e-48 39.2 GGA3 CCDS33643.1 5.7e-45 46.4 GGA1 CCDS54526.1 2.1e-39 46.7 GGA1 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR002014 22 159 PF00790 VHS IPR004152 224 319 PF03127 GAT IPR008152 482 605 PF02883 Clathrin adaptor HMMSmart IPR018205 26 159 SM00288 VHS subgroup IPR008152 481 605 SM00809 Clathrin adaptor ProfileScan IPR002014 33 163 PS50179 VHS IPR004152 188 315 PS50909 GAT IPR008153 484 605 PS50180 Clathrin adaptor
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_055859 613 606005 99.8 100.0 XP_016878563 576 606005 99.8 94.0 XP_016878564 526 606005 99.8 85.8 NP_037497 639 606004 47.8 95.1 XP_016884249 639 606004 47.8 95.1 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA1080 Download

>KIAA1080  1839 bp
ATGGCGGCGACCGCGGTGGCGGCGGCTGTGGCGGGAACCGAGTCGGCCCAGGGTCCCCCG
GGCCCGGCAGCGTCGCTGGAGCTGTGGCTGAACAAAGCCACAGACCCAAGCATGTCGGAA
CAGGATTGGTCAGCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGCCCC
ACACATGCGCCCTGGCTACTGGCCCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTT
TATGCCTTAACGGTGCTGGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAG
GTGGCCAAATTTCGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTGGGG
TCCTGGGCCACAGGAAAAGTTAAAGGAAGAGTCATTGAAATACTCTTCAGTTGGACAGTC
TGGTTTCCGGAAGACATCAAGATTCGAGACGCTTATCAGATGCTGAAGAAACAAGGAATT
ATAAAACAAGACCCTAAACTACCAGTGGATAAAATCTTACCCCCACCATCTCCCTGGCCC
AAGAGCTCCATCTTTGATGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGCTTCTAAAG
AGCAACCACCCCGAGGACCTTCAGGCTGCAAACCGGTTAATCAAGAATTTGGTCAAGGAG
GAACAAGAAAAATCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGC
CATGTGAAGGTGCTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCC
GACCAGGAGGCCCTGCAGGTCGTGTATGAGAGGTGTGAAAAGCTGCGGCCCACGCTGTTC
CGGTTGGCGAGTGACACCACTGATGACGATGATGCACTCGCGGAAATTCTCCAGGCAAAT
GACCTCCTCACCCAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTT
GGAAACAGAGTGACCAGCTCATTGGGAGACATCCCTGTCTCCAGAGTCTTTCAGAATCCA
GCAGGCTGCATGAAGACCTGCCCCCTGATTGACTTGGAGGTGGACAATGGACCTGCGCAG
ATGGGGACTGTGGTGCCATCTTTGCTTCATCAGGACCTGGCAGCCTTGGGAATCAGTGAT
GCTCCTGTTACAGGCATGGTTTCTGGTCAGAATTGCTGTGAGGAAAAGAGGAATCCCTCC
TCCAGCACGCTGCCAGGCGGTGGTGTTCAGAACCCTTCTGCAGACAGGAATTTGCTGGAC
CTCCTCTCACCACAGCCAGCTCCGTGCCCTCTGAATTATGTTTCGCAGAAAAGTGTCCCC
AAGGAAGTGCCACCAGGTACTAAGTCCTCTCCAGGTTGGTCCTGGGAGGCTGGCCCGTTG
GCTCCTTCCCCATCTTCACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTGGAGTCT
GTTAAGCCCAGCAGCCTGCCGCCTCTCATTGTGTATGACCGGAATGGATTCAGAATTCTG
CTCCACTTCTCCCAGACGGGAGCCCCTGGGCACCCAGAGGTACAGGTGCTGCTCTTGACC
ATGATGAGCACGGCTCCCCAGCCTGTCTGGGATATCATGTTTCAAGTGGCTGTGCCAAAG
TCAATGAGAGTGAAGCTGCAGCCGGCATCCAGCTCCAAGCTTCCTGCATTCAGTCCTTTG
ATGCCTCCAGCTGTGATATCTCAGATGCTGCTGCTTGACAATCCACACAAAGAACCTATC
CGCTTACGGTACAAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAA
GTGAAAGACTTCCCAGACCTGGCTGTCTTGGGCGCAGCC

ORF Protein

Cloned ORF protein sequence for pF1KA1080 Download

>KIAA1080  613 aa
MAATAVAAAVAGTESAQGPPGPAASLELWLNKATDPSMSEQDWSAIQNFCEQVNTDPNGP
THAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLG
SWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWP
KSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRS
HVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQAN
DLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDNGPAQ
MGTVVPSLLHQDLAALGISDAPVTGMVSGQNCCEEKRNPSSSTLPGGGVQNPSADRNLLD
LLSPQPAPCPLNYVSQKSVPKEVPPGTKSSPGWSWEAGPLAPSPSSQNTPLAQVFVPLES
VKPSSLPPLIVYDRNGFRILLHFSQTGAPGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPK
SMRVKLQPASSSKLPAFSPLMPPAVISQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGE
VKDFPDLAVLGAA

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA1080 Download

>pF1KA1080  4952 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGGCGGCGACC
GCGGTGGCGGCGGCTGTGGCGGGAACCGAGTCGGCCCAGGGTCCCCCGGGCCCGGCAGCG
TCGCTGGAGCTGTGGCTGAACAAAGCCACAGACCCAAGCATGTCGGAACAGGATTGGTCA
GCTATCCAGAATTTCTGTGAGCAGGTGAACACTGACCCCAATGGCCCCACACATGCGCCC
TGGCTACTGGCCCACAAGATCCAGTCTCCGCAAGAGAAGGAAGCTCTTTATGCCTTAACG
GTGCTGGAGATGTGCATGAACCACTGTGGGGAGAAGTTCCACAGCGAGGTGGCCAAATTT
CGTTTCCTGAACGAACTGATCAAAGTGTTGTCCCCAAAGTACCTGGGGTCCTGGGCCACA
GGAAAAGTTAAAGGAAGAGTCATTGAAATACTCTTCAGTTGGACAGTCTGGTTTCCGGAA
GACATCAAGATTCGAGACGCTTATCAGATGCTGAAGAAACAAGGAATTATAAAACAAGAC
CCTAAACTACCAGTGGATAAAATCTTACCCCCACCATCTCCCTGGCCCAAGAGCTCCATC
TTTGATGCTGATGAAGAAAAGTCCAAGCTTCTGACAAGGCTTCTAAAGAGCAACCACCCC
GAGGACCTTCAGGCTGCAAACCGGTTAATCAAGAATTTGGTCAAGGAGGAACAAGAAAAA
TCGGAGAAGGTGTCCAAGAGGGTCAGTGCGGTGGAGGAAGTGCGAAGCCATGTGAAGGTG
CTGCAGGAGATGCTGAGCATGTACCGCAGGCCAGGGCAGGCCCCGCCCGACCAGGAGGCC
CTGCAGGTCGTGTATGAGAGGTGTGAAAAGCTGCGGCCCACGCTGTTCCGGTTGGCGAGT
GACACCACTGATGACGATGATGCACTCGCGGAAATTCTCCAGGCAAATGACCTCCTCACC
CAAGGAGTTCTGCTGTACAAACAGGTGATGGAGGGCCGGGTCACCTTTGGAAACAGAGTG
ACCAGCTCATTGGGAGACATCCCTGTCTCCAGAGTCTTTCAGAATCCAGCAGGCTGCATG
AAGACCTGCCCCCTGATTGACTTGGAGGTGGACAATGGACCTGCGCAGATGGGGACTGTG
GTGCCATCTTTGCTTCATCAGGACCTGGCAGCCTTGGGAATCAGTGATGCTCCTGTTACA
GGCATGGTTTCTGGTCAGAATTGCTGTGAGGAAAAGAGGAATCCCTCCTCCAGCACGCTG
CCAGGCGGTGGTGTTCAGAACCCTTCTGCAGACAGGAATTTGCTGGACCTCCTCTCACCA
CAGCCAGCTCCGTGCCCTCTGAATTATGTTTCGCAGAAAAGTGTCCCCAAGGAAGTGCCA
CCAGGTACTAAGTCCTCTCCAGGTTGGTCCTGGGAGGCTGGCCCGTTGGCTCCTTCCCCA
TCTTCACAGAATACACCTCTGGCTCAAGTGTTTGTCCCTTTGGAGTCTGTTAAGCCCAGC
AGCCTGCCGCCTCTCATTGTGTATGACCGGAATGGATTCAGAATTCTGCTCCACTTCTCC
CAGACGGGAGCCCCTGGGCACCCAGAGGTACAGGTGCTGCTCTTGACCATGATGAGCACG
GCTCCCCAGCCTGTCTGGGATATCATGTTTCAAGTGGCTGTGCCAAAGTCAATGAGAGTG
AAGCTGCAGCCGGCATCCAGCTCCAAGCTTCCTGCATTCAGTCCTTTGATGCCTCCAGCT
GTGATATCTCAGATGCTGCTGCTTGACAATCCACACAAAGAACCTATCCGCTTACGGTAC
AAGCTGACATTCAACCAAGGTGGACAGCCTTTCAGCGAAGTAGGAGAAGTGAAAGACTTC
CCAGACCTGGCTGTCTTGGGCGCAGCCGTTTAAACGAATTCGAGCTCGGTACCCGGGGAT
CCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGCCCGAAAGGA
AGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGGGGCCTCTAA
ACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCTTGCTGTCCA
TAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTGCTTTCTCTT
TGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCGGGGTCAGCA
CCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTTGCGCCCTGA
GTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCTGGTAAGGTT
GGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGATGGCGCAGG
GGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAACAAGATGGA
TTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGACTGGGCACAA
CAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGGCGCCCGGTT
CTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAGGCAGCGCGG
CTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTTGTCACTGAA
GCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTGTCATCTCAC
CTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTGCATACGCTT
GATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGAGCACGCACT
CGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAGGGGCTCGCG
CCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGATCTCGTCGTG
ACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTTTCTGGATTC
ATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTGGCTACCCGT
GATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTTTACGGTATC
GCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTCTTCTGAGCG
GGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGACTATAAAAGGATCTA
GGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCA
CTGAGCGTCAGACCCCGTAGAAAAGATCAAAGGATCTTCTTGAAATCCTTTTTTTCTGCG
CGTAATCTGCTGCTTGCAAACAAAAAAACCACCGCTACCAGCGGTGGTTTGTTTGCCGGA
TCAAGAGCTACCAACTCTTTTTCCGAAGGTAACTGGCTTCAGCAGAGCGCAGATACCAAA
TACTGTCCTTCTAGTGTAGCCGTAGTTAGGCCACCACTTCAAGAACTCTGTAGCACCGCC
TACATACCTCGCTCTGCTAATCCTGTTACCAGTGGCTGCTGCCAGTGGCGATAAGTCGTG
TCTTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAAC
GGGGGGTTCGTGCACACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCT
ACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCC
GGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTG
GTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACTTGAGCGTCGATTTTTGTGATG
CTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTTTTTACGGTTCCT
GGCCTTTTGCTGGCCTTTTGCTCACATGTTCTTTCCTGCGTTATCCCCTGATTCTGTGGA
TAACCGTATTACCGCCTTTGAGTGAGCTGATACCGGAAATACAGGAACGCACGCTGGATG
GCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTAAGTGGGGGT
AATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTATCAGGCGCG
ATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCCGTGATCGCG
CTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACTTACTGTCTG
CCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGGCGTAGAGGA
TCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACA
GAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGT
GAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCA
GGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTATCTGTTGTT
TGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGA
AGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTA
AGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTTTGTTTATTT
TTCTAAATACATTCAAATATGTATCCGCTCAT