Multiple alignment for pF1KB5968
Check alignment(s).
#  0    Query: pF1KB5968, 556 aa
#  1    CCDS10179.1 RORA gene_id:6095|Hs108|chr15    (556 aa)
#  2    CCDS10178.1 RORA gene_id:6095|Hs108|chr15    (548 aa)
#  3    CCDS45271.1 RORA gene_id:6095|Hs108|chr15    (468 aa)
#  4    CCDS10177.1 RORA gene_id:6095|Hs108|chr15    (523 aa)
#  5    CCDS6646.1 RORB gene_id:6096|Hs108|chr9    (459 aa)

//
        exp       sw-scr    id%      from      to
   1    3e-210      3807  100.0         1     556
   2    3.2e-186    3384   91.5         1     548
   3    1.7e-171    3124   99.8         9     468
   4    7.8e-171    3113   99.8        66     523
   5    9.5e-106    1967   63.9         1     453

//
                                                                             
   0  (    1)    MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARRDELFGILQILHQCI
   1  (    1)    MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARRDELFGILQILHQCI
   2  (    1)    MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARSSSTCSSLSRL---F
   3  (    -)    ............................................................
   4  (    -)    ............................................................
   5  (    -)    ............................................................

//
                                                                             
   0  (   61)    LSSGDAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGYMNAQIEIIPCKICGDKSSGIHYGV
   1  (   61)    LSSGDAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGYMNAQIEIIPCKICGDKSSGIHYGV
   2  (   58)    WSQLEHINWDGATAKNFINLREFFS-----FLLPALRKAQIEIIPCKICGDKSSGIHYGV
   3  (    9)    ....................................MKAQIEIIPCKICGDKSSGIHYGV
   4  (   66)    ......................................SQIEIIPCKICGDKSSGIHYGV
   5  (    1)    ....................................MRAQIEVIPCKICGDKSSGIHYGV

//
                                                                             
   0  (  121)    ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
   1  (  121)    ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
   2  (  113)    ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
   3  (   33)    ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
   4  (   88)    ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
   5  (   25)    ITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGR

//
                                                                             
   0  (  181)    MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
   1  (  181)    MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
   2  (  173)    MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
   3  (   93)    MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
   4  (  148)    MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
   5  (   85)    MSKKQRDSLYAEVQKHQ-QRLQEQRQQQSGEAEALARVYSSSISNGLSNLNNETSGTYAN

//
                                                                             
   0  (  239)    GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
   1  (  239)    GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
   2  (  231)    GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
   3  (  151)    GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
   4  (  206)    GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
   5  (  144)    GHVIDLPKSEGY---YNVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNN

//
                                                                             
   0  (  295)    GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
   1  (  295)    GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
   2  (  287)    GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
   3  (  207)    GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
   4  (  262)    GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
   5  (  201)    GQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQ

//
                                                                             
   0  (  355)    LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
   1  (  355)    LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
   2  (  347)    LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
   3  (  267)    LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
   4  (  322)    LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
   5  (  261)    QCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF

//
                                                                             
   0  (  415)    DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
   1  (  415)    DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
   2  (  407)    DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
   3  (  327)    DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
   4  (  382)    DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
   5  (  321)    EGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRK

//
                                                                             
   0  (  475)    IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
   1  (  475)    IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
   2  (  467)    IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
   3  (  387)    IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
   4  (  442)    IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
   5  (  381)    VQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNT

//
                                       
   0  (  535)    HFPPLYKELFTSEFEPAMQIDG
   1  (  535)    HFPPLYKELFTSEFEPAMQIDG
   2  (  527)    HFPPLYKELFTSEFEPAMQIDG
   3  (  447)    HFPPLYKELFTSEFEPAMQIDG
   4  (  502)    HFPPLYKELFTSEFEPAMQIDG
   5  (  441)    LFPPLYKELFNPD.........

//
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