# 0 Query: pF1KB5968, 556 aa
# 1 CCDS10179.1 RORA gene_id:6095|Hs108|chr15 (556 aa)
# 2 CCDS10178.1 RORA gene_id:6095|Hs108|chr15 (548 aa)
# 3 CCDS45271.1 RORA gene_id:6095|Hs108|chr15 (468 aa)
# 4 CCDS10177.1 RORA gene_id:6095|Hs108|chr15 (523 aa)
# 5 CCDS6646.1 RORB gene_id:6096|Hs108|chr9 (459 aa)
//
exp sw-scr id% from to
1 3e-210 3807 100.0 1 556
2 3.2e-186 3384 91.5 1 548
3 1.7e-171 3124 99.8 9 468
4 7.8e-171 3113 99.8 66 523
5 9.5e-106 1967 63.9 1 453
//
0 ( 1) MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARRDELFGILQILHQCI
1 ( 1) MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARRDELFGILQILHQCI
2 ( 1) MNEGAPGDSDLETEARVPWSIMGHCLRTGQARMSATPTPAGEGARSSSTCSSLSRL---F
3 ( -) ............................................................
4 ( -) ............................................................
5 ( -) ............................................................
//
0 ( 61) LSSGDAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGYMNAQIEIIPCKICGDKSSGIHYGV
1 ( 61) LSSGDAFVLTGVCCSWRQNGKPPYSQKEDKEVQTGYMNAQIEIIPCKICGDKSSGIHYGV
2 ( 58) WSQLEHINWDGATAKNFINLREFFS-----FLLPALRKAQIEIIPCKICGDKSSGIHYGV
3 ( 9) ....................................MKAQIEIIPCKICGDKSSGIHYGV
4 ( 66) ......................................SQIEIIPCKICGDKSSGIHYGV
5 ( 1) ....................................MRAQIEVIPCKICGDKSSGIHYGV
//
0 ( 121) ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
1 ( 121) ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
2 ( 113) ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
3 ( 33) ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
4 ( 88) ITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGR
5 ( 25) ITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGR
//
0 ( 181) MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
1 ( 181) MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
2 ( 173) MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
3 ( 93) MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
4 ( 148) MSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNIS-ANGLTELHDDLSN-YID
5 ( 85) MSKKQRDSLYAEVQKHQ-QRLQEQRQQQSGEAEALARVYSSSISNGLSNLNNETSGTYAN
//
0 ( 239) GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
1 ( 239) GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
2 ( 231) GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
3 ( 151) GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
4 ( 206) GHTPEGSKADSAVSSFYLDI-QPSPDQSGLDINGIKP---EPICDYTPASGFFPYCSFTN
5 ( 144) GHVIDLPKSEGY---YNVDSGQPSPDQSGLDMTGIKQIKQEPIYDLTSVPNLFTYSSFNN
//
0 ( 295) GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
1 ( 295) GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
2 ( 287) GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
3 ( 207) GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
4 ( 262) GETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITWQTFLQEEIENYQNKQREVMWQ
5 ( 201) GQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQTHTYEEIKAYQSKSREALWQ
//
0 ( 355) LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
1 ( 355) LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
2 ( 347) LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
3 ( 267) LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
4 ( 322) LCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYF
5 ( 261) QCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLF
//
0 ( 415) DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
1 ( 415) DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
2 ( 407) DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
3 ( 327) DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
4 ( 382) DGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVK
5 ( 321) EGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIALFSSAVLISPDRAWLIEPRK
//
0 ( 475) IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
1 ( 475) IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
2 ( 467) IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
3 ( 387) IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
4 ( 442) IEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVRL
5 ( 381) VQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVCNLHGEKLQVFKQSHPEIVNT
//
0 ( 535) HFPPLYKELFTSEFEPAMQIDG
1 ( 535) HFPPLYKELFTSEFEPAMQIDG
2 ( 527) HFPPLYKELFTSEFEPAMQIDG
3 ( 447) HFPPLYKELFTSEFEPAMQIDG
4 ( 502) HFPPLYKELFTSEFEPAMQIDG
5 ( 441) LFPPLYKELFNPD.........
//