Multiple alignment for pF1KB3917
Check alignment(s).
#  0    Query: pF1KB3917, 1720 aa
#  1    CCDS42706.1 POLR1A gene_id:25885|Hs108|chr2    (1720 aa)
#  2    CCDS7354.1 POLR3A gene_id:11128|Hs108|chr10    (1390 aa)

//
        exp       sw-scr    id%      from      to
   1    0          11455   99.9         1    1720
   2    6.2e-12     1498   29.3        13    1118

//
                                                                             
   0  (    1)    MLISKNMPWRRLQGISFGMYSAEELKKLS-VKSITNPRY-LDSLGNPSANGLYDLALGPA
   1  (    1)    MLISKNMPWRRLQGISFGMYSAEELKKLS-VKSITNPRY-LDSLGNPSANGLYDLALGPA
   2  (   13)    .........KKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNQHAPLLYGVLDHRMGTS

//
                                                                             
   0  (   59)    DSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIH
   1  (   59)    DSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIH
   2  (   64)    EKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTC----C-----H

//
                                                *                            
   0  (  119)    LLLCQLRVLEVGALQAVYELERILNRFLEENADPSASEIREE-LEQYTTEIVQNNLLGSQ
   1  (  119)    LLLCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREE-LEQYTTEIVQNNLLGSQ
   2  (  115)    IMLSQ-------------EEKK---QFLDYLKRPGLTYLQKRGLKKKISDKCRK------

//
                                                                             
   0  (  178)    GAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQ
   1  (  178)    GAHVKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQ
   2  (  153)    ----KNICHHCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSNFLQSFETAIEH----N

//
                                                                             
   0  (  238)    KDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRF-----
   1  (  238)    KDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRF-----
   2  (  205)    KEVEPL------LGR--------AQENLNPL-----VVLN-LFKRIPAEDVPLLLMNPEA

//
                                                                             
   0  (  293)    -NPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKL
   1  (  293)    -NPSVFFLDFLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKL
   2  (  245)    GKPSDLILTRLLVPPLCIRP-SVVSD-LKSGTNEDDLTMKLTEIIFLNDVI----KKHRI

//
                                                                             
   0  (  352)    PEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMM
   1  (  352)    PEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMM
   2  (  299)    ---------SGAKTQMIMED-------------------WDFLQLQCALYINSELSGIPL

//
                                                                             
   0  (  412)    DKYP-----GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKL
   1  (  412)    DKYP-----GIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKL
   2  (  331)    NMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKIL

//
                                                                             
   0  (  467)    TYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPA
   1  (  467)    TYPQPVTPWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPA
   2  (  391)    TFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHTQMKRF--LKYGNREKMAQEL----

//
                                                                             
   0  (  527)    TGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYN
   1  (  527)    TGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYN
   2  (  445)    ------KYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPH-RTFRFNECVCTPYN

//
                                                                             
   0  (  587)    ADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGC
   1  (  587)    ADFDGDEMNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGC
   2  (  498)    ADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTLKDT

//
                                                                             
   0  (  647)    FFTREHYMELVYRGLT--DKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLN
   1  (  647)    FFTREHYMELVYRGLT--DKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLN
   2  (  558)    FFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQIFSVILR---PSDDNPVR

//
                                                                             
   0  (  705)    LSGKAKITGKAWVKETPRSVPGFNPDSMC--ESQVIIREGELLCGVLDKAHYGS-SAYGL
   1  (  705)    LSGKAKITGKAWVKETPRSVPGFNPDSMC--ESQVIIREGELLCGVLDKAHYGS-SAYGL
   2  (  615)    ANLRTK--GKQYC--------GKGED-LCANDSYVTIQNSELMSGSMDKGTLGSGSKNNI

//
                                                                             
   0  (  762)    VHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTH
   1  (  762)    VHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTH
   2  (  664)    FYILLRDWGQNEAADAMSRLARLAPVYLS-NRGFSIGIGD--VTPGQGLLKAKY--ELLN

//
                                                                             
   0  (  822)    CGPQAVRAALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACM
   1  (  822)    CGPQAVRAALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACM
   2  (  719)    AGYKKCDEYI---EALN----TGKLQQQPGCTAEETLEALILK---ELSVIRDHAGSACL

//
                                                                             
   0  (  882)    PFGLHRQFPE-NSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEP
   1  (  882)    PFGLHRQFPE-NSLQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEP
   2  (  769)    -----RELDKSNSPLTMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEK

//
                                                                             
   0  (  941)    YEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLV
   1  (  941)    YEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLV
   2  (  824)    HSKLPAAKGFVANSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLC

//
                                                                             
   0  ( 1001)    VQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFL-QPKQFPFLASNYEVIMKSQHLHEVLSR
   1  ( 1001)    VQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFL-QPKQFPFLASNYEVIMKSQHLHEVLSR
   2  (  884)    SQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCP--------

//
                                                                             
   0  ( 1060)    ADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQK-IQEAVKALKLESENRNGRSPGTQ
   1  ( 1060)    ADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQK-IQEAVKALKLESENRNGRSPGTQ
   2  (  936)    SEP--ALSKNELILTTES-----IMKKSEFLCCQDSFLQEIKKFIK-----------GVS

//
                                                                             
   0  ( 1119)    EMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQT
   1  ( 1119)    EMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQT
   2  (  978)    EKIK-------KTRDKYGINDNGTTEPRV------LY----------QLDRITP---TQV

//
                                                                             
   0  ( 1179)    EKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGE
   1  ( 1179)    EKSYEKSELSLDRLRTLLQLKWQRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGE
   2  ( 1012)    EKFLETCR---D--------KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVAS

//
                                                                             
   0  ( 1239)    MNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKID
   1  ( 1239)    MNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKID
   2  ( 1061)    MNITLGVPRIKEIIN-ASKAISTPIITAQ-LDKDDDADYARLVKGRIEKTLLGEISEYIE

//
                                                                             
   0  ( 1299)    VQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKN
   1  ( 1299)    VQESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKN
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1359)    NKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRK
   1  ( 1359)    NKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRK
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1419)    EKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPA
   1  ( 1419)    EKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPA
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1479)    LLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINF
   1  ( 1479)    LLTQPRKPTHSQEPQGPEAMERRVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINF
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1539)    DMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLR
   1  ( 1539)    DMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLR
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1599)    RLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLN
   1  ( 1599)    RLYSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLN
   2  (    -)    ............................................................

//
                                                                             
   0  ( 1659)    RFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQP
   1  ( 1659)    RFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQP
   2  (    -)    ............................................................

//
                   
   0  ( 1719)    LR
   1  ( 1719)    LR
   2  (    -)    ..

//
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