# 0 Query: pF1KE2391, 517 aa
# 1 CCDS2494.1 CHRND gene_id:1144|Hs108|chr2 (517 aa)
# 2 CCDS58754.1 CHRND gene_id:1144|Hs108|chr2 (502 aa)
# 3 CCDS33400.1 CHRNG gene_id:1146|Hs108|chr2 (517 aa)
# 4 CCDS11058.1 CHRNE gene_id:1145|Hs108|chr17 (493 aa)
# 5 CCDS11106.1 CHRNB1 gene_id:1140|Hs108|chr17 (501 aa)
//
exp sw-scr id% from to
1 0 3452 100.0 1 517
2 2e-198 3315 97.1 1 502
3 8.6e-101 1547 48.2 5 512
4 3.3e-84 1432 46.1 6 487
5 2e-81 1268 40.4 7 501
//
0 ( 1) MEGPVLTLGLLAALAVC-G-SWGLNEEERLIRHLFQEKGYNKELRPVAHKEESVDVALAL
1 ( 1) MEGPVLTLGLLAALAVC-G-SWGLNEEERLIRHLFQEKGYNKELRPVAHKEESVDVALAL
2 ( 1) MEGPVLTLGLLAALAVC-G-SWGLNEEERLIRHLFQEKGYNKELRPVAHKEESVDVALAL
3 ( 5) .QGPLL---LLLLLAVCLG-AQGRNQEERLLADLMQ--NYDPNLRPAERDSDVVNVSLKL
4 ( 6) .......LGVLLLLGLL-GRGVGKNEELRLYHHLFNN--YDPGSRPVREPEDTVTISLKV
5 ( 7) ....LMLLGALGAPLAP-G-VRGSEAEGRLREKLF--SGYDSSVRPAREVGDRVRVSVGL
//
0 ( 59) TLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMVWLPEIVLENN
1 ( 59) TLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMVWLPEIVLENN
2 ( 59) TLSNLISL---------------GWTDNRLKWNAEEFGNISVLRLPPDMVWLPEIVLENN
3 ( 58) TLTNLISLNEREEALTTNVWIEMQWCDYRLRWDPRDYEGLWVLRVPSTMVWRPDIVLENN
4 ( 56) TLTNLISLNEKEETLTTSVWIGIDWQDYRLNYSKDDFGGIETLRVPSELVWLPEIVLENN
5 ( 59) ILAQLISLNEKDEEMSTKVYLDLEWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNN
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0 ( 119) NDGSFQISYSCNVLVYHYGFVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKE
1 ( 119) NDGSFQISYSCNVLVYHYGFVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKE
2 ( 104) NDGSFQISYSCNVLVYHYGFVYWLPPAIFRSSCPISVTYFPFDWQNCSLKFSSLKYTAKE
3 ( 118) VDGVFEVALYCNVLVSPDGCIYWLPPAIFRSACSISVTYFPFDWQNCSLIFQSQTYSTNE
4 ( 116) IDGQFGVAYDANVLVYEGGSVTWLPPAIYRSVCAVEVTYFPFDWQNCSLIFRSQTYNAEE
5 ( 119) NDGNFDVALDISVVVSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSE
//
0 ( 179) ITLS--LKQDAKENRTYPVEWIIIDPEG-FTENGEWEIVHRPARVNVDPRAPLDS--PSR
1 ( 179) ITLS--LKQDAKENRTYPVEWIIIDPEG-FTENGEWEIVHRPARVNVDPRAPLDS--PSR
2 ( 164) ITLS--LKQDAKENRTYPVEWIIIDPEG-FTENGEWEIVHRPARVNVDPRAPLDS--PSR
3 ( 178) IDLQ--LSQE--DGQT--IEWIFIDPEA-FTENGEWAIQHRPAKMLLDPAAPAQE--AGH
4 ( 176) VEFT--FAVD-NDGKT--INKIDIDTEA-YTENGEWAIDFCPGVIRRHHGGATDG--PGE
5 ( 179) VSLQTGLGPDGQGHQEIHIH------EGTFIENGQWEIIHKPSRLIQPPGDPRGGREGQR
//
0 ( 234) QDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADSG-EKTSVAISVLLAQSVFL
1 ( 234) QDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADSG-EKTSVAISVLLAQSVFL
2 ( 219) QDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADSG-EKTSVAISVLLAQSVFL
3 ( 229) QKVVFYLLIQRKPLFYVINIIAPCVLISSVAILIHFLPAKAGGQKCTVAINVLLAQTVFL
4 ( 228) TDVIYSLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFL
5 ( 233) QEVIFYLIIRRKPLFYLVNVIAPCILITLLAIFVFYLPPDAG-EKMGLSIFALLTLTVFL
//
0 ( 293) LLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFL
1 ( 293) LLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFL
2 ( 278) LLISKRLPATSMAIPLIGKFLLFGMVLVTMVVVICVIVLNIHFRTPSTHVLSEGVKKLFL
3 ( 289) FLVAKKVPETSQAVPLISKYLTFLLVVTILIVVNAVVVLNVSLRSPHTHSMARGVRKVFL
4 ( 288) FLIAQKIPETSLSVPLLGRFLIFVMVVATLIVMNCVIVLNVSQRTPTTHAMSPRLRHVLL
5 ( 292) LLLADKVPETSLSVPIIIKYLMFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFI
//
0 ( 353) ETLPELLHMS-RPAEDG---PSPGALVR-RSSSLGY-ISKAEEYFLLKSRSDLMFEKQSE
1 ( 353) ETLPELLHMS-RPAEDG---PSPGALVR-RSSSLGY-ISKAEEYFLLKSRSDLMFEKQSE
2 ( 338) ETLPELLHMS-RPAEDG---PSPGALVR-RSSSLGY-ISKAEEYFLLKSRSDLMFEKQSE
3 ( 349) RLLPQLLRMHVRPLAPA---AVQDTQSRLQNGSSGWSITTGEEVALCLPRSELLFQ-QWQ
4 ( 348) ELLPRLLG-S-PPPPEA---PRAASPPR-RASSVGL-LLRAEELILKKPRSELVFEGQRH
5 ( 352) HKLPLYLRLK-RPKPERDLMPEPPHC---SSPGSGW-GRGTDEYFIRKPPSDFLFPKPN-
//
0 ( 407) RHGL-ARRLTTARRPPASSEQAQQELFNELK---PA----VDGANFIVNHMRDQNNYNEE
1 ( 407) RHGL-ARRLTTARRPPASSEQAQQELFNELK---PA----VDGANFIVNHMRDQNNYNEE
2 ( 392) RHGL-ARRLTTARRPPASSEQAQQELFNELK---PA----VDGANFIVNHMRDQNNYNEE
3 ( 405) RQGLVAAALEKLEKGP---ELGLSQFCGSLKQAAPAIQACVEACNLIACARHQQSHFDNG
4 ( 401) RQGT-WT---------AAFCQSLGAAAPEVR---CC----VDAVNFVAESTRDQEATGEE
5 ( 406) RFQP-ELSAPDLRRFIDGPNRAVA-LLPELR---EV----VSSISYIARQLQEQEDHDAL
//
0 ( 459) KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQGVYNQPPPQPFPGDPYSYNVQDKRFI
1 ( 459) KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQGVYNQPPPQPFPGDPYSYNVQDKRFI
2 ( 444) KDSWNRVARTVDRLCLFVVTPVMVVGTAWIFLQGVYNQPPPQPFPGDPYSYNVQDKRFI
3 ( 462) NEEWFLVGRVLDRVCFLAMLSLFICGTAGIFLMAHYNRVPALPFPGDPRPY........
4 ( 444) VSDWVRMGNALDNICFWAALVLFSVGSSLIFLGAYFNRVPDLPY...............
5 ( 457) KEDWQFVAMVVDRLFLWTFIIFTSVGTLVIFLDATYHLPPPDPFP..............
//