# 0 Query: pF1KB0044, 1258 aa
# 1 CCDS3090.1 STAG1 gene_id:10274|Hs108|chr3 (1258 aa)
# 2 CCDS14607.1 STAG2 gene_id:10735|Hs108|chrX (1231 aa)
# 3 CCDS43990.1 STAG2 gene_id:10735|Hs108|chrX (1268 aa)
# 4 CCDS34703.1 STAG3 gene_id:10734|Hs108|chr7 (1225 aa)
# 5 CCDS75642.1 STAG3 gene_id:10734|Hs108|chr7 (1226 aa)
//
exp sw-scr id% from to
1 0 8287 100.0 1 1258
2 0 5782 70.0 1 1231
3 0 5898 70.3 1 1268
4 9.8e-202 3753 48.9 23 1224
5 9.8e-202 3756 48.9 23 1225
//
0 ( 1) MITS-ELPVLQDSTNETTAHS------DAGSELEETEVKGKRKRGRPGRPPSTNKKPRKS
1 ( 1) MITS-ELPVLQDSTNETTAHS------DAGSELEETEVKGKRKRGRPGRPPSTNKKPRKS
2 ( 1) MIAAPEIPTDFNLLQESETHF------SSDTDFEDIEGKNQ-KQGK-GK---TCKKGKKG
3 ( 1) MIAAPEIPTDFNLLQESETHF------SSDTDFEDIEGKNQ-KQGK-GK---TCKKGKKG
4 ( 23) ..SA-SLPFDDRDSNHTSEGNGDSLLADEDTDFEDSLNRNVKKRAAK-RPPKTTPVA-KH
5 ( 23) ..SA-SLPFDDRDSNHTSEGNGDSLLADEDTDFEDSLNRNVKKRAAK-RPPKTTPVA-KH
//
0 ( 54) PGEKSRIEAGIRGAGR-----GRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIES
1 ( 54) PGEKSRIEAGIRGAGR-----GRANGHPQQNGEGEPVTLFEVVKLGKSAMQSVVDDWIES
2 ( 50) PAEKGK---GGNGGGKPPSGPNRMNGHHQQNGV-ENMMLFEVVKMGKSAMQSVVDDWIES
3 ( 50) PAEKGK---GGNGGGKPPSGPNRMNGHHQQNGV-ENMMLFEVVKMGKSAMQSVVDDWIES
4 ( 78) PKKGSRV----------------VHRHSRKQSEPPANDLFNAVKAAKSDMQSLVDEWLDS
5 ( 78) PKKGSRV----------------VHRHSRKQSEPPANDLFNAVKAAKSDMQSLVDEWLDS
//
0 ( 109) YKQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPG
1 ( 109) YKQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPG
2 ( 106) YKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAG
3 ( 106) YKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAG
4 ( 122) YKQDQDAGFLELVNFFIQSCGCKGIVTPEMFKKMSNSEIIQHLTEQFNEDSGDYPLIAPG
5 ( 122) YKQDQDAGFLELVNFFIQSCGCKGIVTPEMFKKMSNSEIIQHLTEQFNEDSGDYPLIAPG
//
0 ( 169) PQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMK
1 ( 169) PQWKKFRSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMK
2 ( 166) PQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMK
3 ( 166) PQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMK
4 ( 182) PSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISLLTGLSDSQVRAFRHTSTLAAMK
5 ( 182) PSWKKFQGSFCEFVRTLVCQCQYSLLYDGFPMDDLISLLTGLSDSQVRAFRHTSTLAAMK
//
0 ( 229) LMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMM
1 ( 229) LMTALVNVALNLSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMM
2 ( 226) LMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMM
3 ( 226) LMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMM
4 ( 242) LMTSLVKVALQLSVHQDNNQRQYEAERNKGPGQRAPERLESLLEKRKELQEHQEEIEGMM
5 ( 242) LMTSLVKVALQLSVHQDNNQRQYEAERNKGPGQRAPERLESLLEKRKELQEHQEEIEGMM
//
0 ( 289) NSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRL
1 ( 289) NSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRL
2 ( 286) NAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRL
3 ( 286) NAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRL
4 ( 302) NALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRL
5 ( 302) NALFRGVFVHRYRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREVRL
//
0 ( 349) KCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEAL
1 ( 349) KCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEAL
2 ( 346) KCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVL
3 ( 346) KCLTALQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVL
4 ( 362) KCVKALKGLYGNRDLTTRLELFTSRFKDRMVSMVMDREYDVAVEAVRLLILILKNMEGVL
5 ( 362) KCVKALKGLYGNRDLTTRLELFTSRFKDRMVSMVMDREYDVAVEAVRLLILILKNMEGVL
//
0 ( 409) SNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAE-EALAKRRGRNSPNGN--LI
1 ( 409) SNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAE-EALAKRRGRNSPNGN--LI
2 ( 406) TAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPE-E-DGMMKRRGRQGPNAN--LV
3 ( 406) TAEDCENVYHLVYSAHRPVAVAAGEFLYKKLFSRRDPE-E-DGMMKRRGRQGPNAN--LV
4 ( 422) TDADCESVYPVVYASHRGLASAAGEFLYWKLFY---PECEIRMMGGREQRQSPGAQRTFF
5 ( 422) TDADCESVYPVVYASHRGLASAAGEFLYWKLFY---PECEIRMMGGREQRQSPGAQRTFF
//
0 ( 466) RMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESAL
1 ( 466) RMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESAL
2 ( 462) KTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESAL
3 ( 462) KTLVFFFLESELHEHAAYLVDSMWDCATELLKDWECMNSLLLEEPLSGEEALTDRQESAL
4 ( 479) QLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEGLTSLLLEK----DQNLGDVQESTL
5 ( 479) QLLLSFFVESELHDHAAYLVDSLWDCAGARLKDWEGLTSLLLEK----DQNLGDVQESTL
//
0 ( 526) IELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSAD
1 ( 526) IELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSAD
2 ( 522) IEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVD
3 ( 522) IEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDRTKITELFAVALPQLLAKYSVD
4 ( 535) IEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQADDRVKLTEHLIPLLPQLLAKFSAD
5 ( 535) IEILVSSARQASEGHPPVGRVTGRKGLTSKERKTQADDRVKLTEHLIPLLPQLLAKFSAD
//
0 ( 586) AEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCS
1 ( 586) AEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCS
2 ( 582) AEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCN
3 ( 582) AEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLEACSKTYHALCN
4 ( 595) AEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQEVVVKHAEPAVLEAGAHALYLLCN
5 ( 595) AEKVTPLLQLLSCFDLHIYCTGRLEKHLELFLQQLQEVVVKHAEPAVLEAGAHALYLLCN
//
0 ( 646) EEYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAH
1 ( 646) EEYTIQNRVDIARSQLIDEFVDRFNHSVEDLLQEGEEADDDDIYNVLSTLKRLTSFHNAH
2 ( 642) EEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAH
3 ( 642) EEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAH
4 ( 655) PEFTFFSRADFARSQLVDLLTDRFQQELEELLQSSF-LDEDEVYNLAATLKRLSAFYNTH
5 ( 655) PEFTFFSRADFARSQLVDLLTDRFQQELEELLQSSF-LDEDEVYNLAATLKRLSAFYNTH
//
0 ( 706) DLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVL
1 ( 706) DLTKWDLFGNCYRLLKTGIEHGAMPEQIVVQALQCSHYSILWQLVKITDGSPSKEDLLVL
2 ( 702) DLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRL
3 ( 702) DLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRL
4 ( 714) DLTRWELYEPCCQLLQKAVDTGEVPHQVILPALTLVYFSILWTLTHISKSDASQKQLSSL
5 ( 714) DLTRWELYEPCCQLLQKAVDTGEVPHQVILPALTLVYFSILWTLTHISKSDASQKQLSSL
//
0 ( 766) RKTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGL
1 ( 766) RKTVKSFLAVCQQCLSNVNTPVKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGL
2 ( 762) KKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSL
3 ( 762) KKQMRVFCQICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSL
4 ( 774) RDRMVAFCELCQSCLSDVDTEIQEQAFVLLSDLLLIFSPQMIVGGRDFLRPLVFFPEATL
5 ( 774) RDRMVAFCELCQSCLSDVDTEIQEQAFVLLSDLLLIFSPQMIVGGRDFLRPLVFFPEATL
//
0 ( 826) QSELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHA
1 ( 826) QSELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHA
2 ( 822) QSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNT
3 ( 822) QSELLSFILDHVFIEQDDDNNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNT
4 ( 834) QSELASFLMDHVFIQPGDLGS---GDSQEDHLQIERLHQRRRLLAGFCKLLLYGVLEMDA
5 ( 834) QSELASFLMDHVFIQPGDLGS---GDSQEDHLQIERLHQRRRLLAGFCKLLLYGVLEMDA
//
0 ( 886) AADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPN-LDR
1 ( 886) AADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGPN-LDR
2 ( 882) AADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYN-FDR
3 ( 882) AADIFKQYMKYYNDYGDIIKETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYN-FDR
4 ( 891) ASDVFKHYNKFYNDYGDIIKETLTRARQIDRSHCSRILLLSLKQLYTELLQEHGPQGLNE
5 ( 891) ASDVFKHYNKFYNDYGDIIKETLTRARQIDRSHCSRILLLSLKQLYTELLQEHGPQGLNE
//
0 ( 945) TSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFL
1 ( 945) TSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYPPPNLAFL
2 ( 941) SSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFL
3 ( 941) SSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAFKEPNPQGESHPPLNLAFL
4 ( 951) LPAFIE-MRDLARRFALSFGPQQLQNRDLVVMLHKEGIQFSLSELPPAGSSNQPPNLAFL
5 ( 951) LPAFIE-MRDLARRFALSFGPQQLQNRDLVVMLHKEGIQFSLSELPPAGSSNQPPNLAFL
//
0 ( 1005) EVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVN
1 ( 1005) EVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVN
2 ( 1001) DILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVI
3 ( 1001) DILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLAGGDDDTMSVI
4 ( 1010) ELLSEFSPRLFHQDKQLLLSYLEKCL-QHVSQAPGHPWGPVTTYCHSLSP-------VEN
5 ( 1010) ELLSEFSPRLFHQDKQLLLSYLEKCL-QHVSQAPGHPWGPVTTYCHSLSP-------VEN
//
0 ( 1065) SGSSSSKT-SSVRNKKGRPPLHKKRV----------EDESLDNTWLNRTDTMIQTPGPLP
1 ( 1065) SGSSSSKT-SSVRNKKGRPPLHKKRV----------EDESLDNTWLNRTDTMIQTPGPLP
2 ( 1061) SGISS-RG-STVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTL-HTPVMMQ
3 ( 1061) SGISS-RG-STVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTL-HTPVMMQ
4 ( 1062) TAETSPQVLPSSKRRRVEGPAKPNR-----------EDVS------SSQEESLQLNSIPP
5 ( 1062) TAETSPQVLPSSKRRRVEGPAKPNR-----------EDVS------SSQEESLQLNSIPP
//
0 ( 1114) APQLTSTVLRENSR--PMGD--QIQEPESEHGSEP-DFLHNPQ-----MQIS----W-LG
1 ( 1114) APQLTSTVLRENSR--PMGD--QIQEPESEHGSEP-DFLHNPQ-----MQIS----W-LG
2 ( 1118) TPQLTSTIMREPKR----------LRPED-------SFMSVYP-----MQTE----H-HQ
3 ( 1118) TPQLTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDY----N-----TQVT----WMLA
4 ( 1105) TPTLTSTAVK-SRQ--PLWG---LKEMEEEDGSEL-DFAQGQP-----VAGTERSRF-LG
5 ( 1105) TPTLTSTAVK-SRQ--PLWG---LKEMEEEDGSEL-DFAQGSQPVAGTERSR----F-LG
//
0 ( 1159) QPKLEDL-NRKDRTGMNYMKVRTGVRHAVR---GLMEEDAEPIFEDVMMSSRSQLEDMNE
1 ( 1159) QPKLEDL-NRKDRTGMNYMKVRTGVRHAVR---GLMEEDAEPIFEDVMMSSRSQLEDMNE
2 ( 1151) TPL--DY-NRRGTS--------------------LMEDDEEPIVEDVMMSSEGRIEDLNE
3 ( 1165) QRQQEEARQQQERAAMSYVKLRTNLQHAIRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNE
4 ( 1152) PQYFQTP-HNPSGPGLGNQLMRLS----------LMEEDEE---EELEIQDES-----NE
5 ( 1153) PQYFQTP-HNPSGPGLGNQLMRLS----------LMEEDEE---EELEIQDES-----NE
//
0 ( 1215) EFE-DTMVIDLPPSRNRRERAELRPDFFDSAAI-IEDDSGFGMPMF
1 ( 1215) EFE-DTMVIDLPPSRNRRERAELRPDFFDSAAI-IEDDSGFGMPMF
2 ( 1188) GMDFDTMDIDLPPSKNRRERTELKPDFFDPASI-M-DESVLGVSMF
3 ( 1225) GMDFDTMDIDLPPSKNRRERTELKPDFFDPASI-M-DESVLGVSMF
4 ( 1193) ERQ-DT---DMQAS-SYSSTSERGLDLLDSTELDIED.........
5 ( 1194) ERQ-DT---DMQAS-SYSSTSERGLDLLDSTELDIED.........
//