KaPPA-View4 is the web-based database which can represent user-uploaded '-omics' data on the metabolic pathway maps. The change of gene expressions and metabolite accumulations between the samples are visualized as hue of the gene and metabolite symbols. Furthermore, gene-to-gene and metabolite-to-metabolite relationships such as correlation coefficients of gene co-expressions can be overlay on the pathway maps. These functions will help researchers to discover biological significance in the omics data.
Sakurai N et al. (2011) Nucleic Acids Research Database Issue in press
Ogata Y et al. (2008) The Handbood of Plant Functional Genomics: Concepts and Protocols (Kahl G and Keksem K eds.) pp. 309-335, WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim
Tokimatsu T et al. (2006) Biotechnology in Agriculture and Forestry (Saito K et al. eds.) Vol. 57: 155-163 Springer-Verlag, Berlin
Sakurai N and Shibata D (2006) J Pesticide Science 31: 293-295
Tokimatsu T et al. (2005) Plant Physiol. 138: 1289-1300